Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaB03g14145 Brassica carinata HOM05D008527 ORTHO05D010701 2.6e-74 282.3 187 100.0
BcaC06g35042 Brassica carinata HOM05D008527 ORTHO05D010701 1.0e-65 253.8 187 86.6
A07p13850 Brassica napus HOM05D008527 ORTHO05D010701 1.0e-65 253.8 187 86.6
BolC7t42561H Brassica oleracea HOM05D008527 ORTHO05D010701 1.0e-65 253.8 187 86.6
BraA07t29139Z Brassica rapa HOM05D008527 ORTHO05D010701 2.2e-65 252.7 187 85.0
C07p20400 Brassica napus HOM05D008527 ORTHO05D010701 4.2e-64 248.4 187 85.6
BcaB03g11943 Brassica carinata HOM05D008527 ORTHO05D010701 1.6e-55 219.9 193 79.8
BcaB03g11945 Brassica carinata HOM05D008527 ORTHO05D010701 1.6e-55 219.9 193 79.8
A08p28140 Brassica napus HOM05D008527 ORTHO05D010701 2.1e-55 219.5 192 81.2
BraA08t34747Z Brassica rapa HOM05D008527 ORTHO05D010701 2.1e-55 219.5 192 81.2
Sp1g20970 Schrenkiella parvula HOM05D008527 ORTHO05D010701 9.8e-53 210.7 192 79.7
BcaC07g39203 Brassica carinata HOM05D008527 ORTHO05D010701 3.8e-49 198.7 189 76.2
C08p21950 Brassica napus HOM05D008527 ORTHO05D010701 3.8e-49 198.7 189 76.2
BolC8t49831H Brassica oleracea HOM05D008527 ORTHO05D010701 3.8e-49 198.7 189 76.2
AL1G37290 Arabidopsis lyrata HOM05D008527 ORTHO05D010701 1.6e-42 176.8 198 61.6
BcaNung06957 Brassica carinata HOM05D008527 ORTHO05D010701 9.5e-40 167.5 189 72.0
Thhalv10008871m.g Eutrema salsugineum HOM05D008527 ORTHO05D010701 1.2e-39 167.2 192 67.7
Carub.0001s2307 Capsella rubella HOM05D008527 ORTHO05D010701 2.3e-33 146.4 194 65.5
AT1G23530 Arabidopsis thaliana HOM05D008527 ORTHO05D010701 2.5e-32 142.9 196 63.8
BcaB07g32343 Brassica carinata HOM05D008527 ORTHO05D010701 2.1e-31 139.8 209 49.3
BolC5t30985H Brassica oleracea HOM05D008527 ORTHO05D010701 8.9e-30 134.4 220 50.0
CARHR023970 Cardamine hirsuta HOM05D008527 ORTHO05D010701 1.2e-29 134.0 199 61.8
BcaC05g26275 Brassica carinata HOM05D008527 ORTHO05D010701 2.0e-29 133.3 220 49.5
C05p22860 Brassica napus HOM05D008527 ORTHO05D010701 9.8e-29 131.0 220 49.1
A09p41140 Brassica napus HOM05D008527 ORTHO05D010701 2.2e-28 129.8 220 48.6
BraA09t39607Z Brassica rapa HOM05D008527 ORTHO05D010701 2.2e-28 129.8 220 48.6
Aa31LG7G7580 Aethionema arabicum HOM05D008527 ORTHO05D010701 3.2e-27 125.9 195 57.9
THA.LOC104822151 Tarenaya hassleriana HOM05D008527 ORTHO05D010701 4.9e-20 102.1 188 48.4
Aa31LG4G10480 Aethionema arabicum HOM05D008527 ORTHO05D010701 2.4e-19 99.8 152 44.1
THA.LOC104824704 Tarenaya hassleriana HOM05D008527 ORTHO05D010701 7.1e-19 98.2 190 53.2
A07p36840 Brassica napus HOM05D008527 ORTHO05D010701 6.0e-18 95.1 109 65.1
AL2G29840 Arabidopsis lyrata HOM05D008527 ORTHO05D010701 3.3e-16 89.4 131 55.7
AT1G70470 Arabidopsis thaliana HOM05D008527 ORTHO05D010701 7.3e-16 88.2 68 66.2
Carub.0002s1715 Capsella rubella HOM05D008527 ORTHO05D010701 1.6e-15 87.0 136 45.6
Sp5g25540 Schrenkiella parvula HOM05D008527 ORTHO05D010701 2.1e-15 86.7 101 52.5
Thhalv10019272m.g Eutrema salsugineum HOM05D008527 ORTHO05D010701 2.8e-15 86.3 101 53.5
BcaC03g15190 Brassica carinata HOM05D008527 ORTHO05D010701 2.3e-14 83.2 69 65.2
A02p16540 Brassica napus HOM05D008527 ORTHO05D010701 3.1e-14 82.8 129 45.7
A07p31080 Brassica napus HOM05D008527 ORTHO05D010701 3.1e-14 82.8 80 61.2
BraA02t06712Z Brassica rapa HOM05D008527 ORTHO05D010701 3.1e-14 82.8 129 45.7
BraA07t30743Z Brassica rapa HOM05D008527 ORTHO05D010701 3.1e-14 82.8 80 61.2
BolC2t08819H Brassica oleracea HOM05D008527 ORTHO05D010701 8.9e-14 81.3 129 45.7
C02p27710 Brassica napus HOM05D008527 ORTHO05D010701 1.2e-13 80.9 66 66.7
CARHR063630 Cardamine hirsuta HOM05D008527 ORTHO05D010701 1.7e-12 77.0 82 53.7
BcaC08g46489 Brassica carinata HOM05D008527 ORTHO05D010701 3.7e-12 75.9 108 50.0
C06p44320 Brassica napus HOM05D008527 ORTHO05D010701 3.7e-12 75.9 108 50.0
BolC6t39502H Brassica oleracea HOM05D008527 ORTHO05D010701 3.7e-12 75.9 108 50.0
BcaB05g24574 Brassica carinata HOM05D008527 ORTHO05D010701 1.1e-11 74.3 60 68.3
BcaB05g24577 Brassica carinata HOM05D008527 ORTHO05D010701 1.1e-11 74.3 60 68.3


User provided reference genes

Program Settings