Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaB03g14131 Brassica carinata HOM05D003612 ORTHO05D004323 1.8e-29 131.7 60 100.0
BcaC09g48296 Brassica carinata HOM05D003612 ORTHO05D018660 7.3e-18 93.2 59 71.2
BcaC01g05568 Brassica carinata HOM05D003612 ORTHO05D018660 5.2e-16 87.0 56 69.6
BcaC03g13974 Brassica carinata HOM05D003612 ORTHO05D018660 5.2e-16 87.0 56 69.6
C02p42240 Brassica napus HOM05D003612 ORTHO05D018660 5.2e-16 87.0 56 69.6
C03p24820 Brassica napus HOM05D003612 ORTHO05D018660 5.2e-16 87.0 56 69.6
BolC2t07266H Brassica oleracea HOM05D003612 ORTHO05D018660 5.2e-16 87.0 56 69.6
BolC3t14871H Brassica oleracea HOM05D003612 ORTHO05D018660 5.2e-16 87.0 56 69.6
BolC1t05129H Brassica oleracea HOM05D003612 ORTHO05D018660 8.9e-16 86.3 59 62.7
Sp5g05240 Schrenkiella parvula HOM05D003612 ORTHO05D004323 6.4e-14 80.1 53 66.0
Carub.0005s2421 Capsella rubella HOM05D003612 ORTHO05D004323 2.4e-13 78.2 52 59.6
AL5G38900 Arabidopsis lyrata HOM05D003612 ORTHO05D004323 4.1e-13 77.4 53 66.0
A09p50260 Brassica napus HOM05D003612 ORTHO05D004323 4.1e-13 77.4 58 62.1
BraA09t40476Z Brassica rapa HOM05D003612 ORTHO05D004323 4.1e-13 77.4 58 62.1
AT3G57360 Arabidopsis thaliana HOM05D003612 ORTHO05D004323 5.4e-13 77.0 53 64.2
BolC8t50888H Brassica oleracea HOM05D003612 ORTHO05D004323 5.4e-13 77.0 53 66.0
BcaC07g40390 Brassica carinata HOM05D003612 ORTHO05D004323 1.2e-12 75.9 53 67.9
BcaNung07092 Brassica carinata HOM05D003612 ORTHO05D004323 3.0e-11 71.2 50 64.0
Carub.0001s3481 Capsella rubella HOM05D003612 ORTHO05D004323 1.1e-10 69.3 52 51.9
CARHR167560 Cardamine hirsuta HOM05D003612 ORTHO05D004323 1.9e-10 68.6 51 62.7
AL3G11670 Arabidopsis lyrata HOM05D003612 ORTHO05D004323 1.6e-09 65.5 53 54.7
Thhalv10009908m.g Eutrema salsugineum HOM05D003612 ORTHO05D004323 2.1e-09 65.1 53 60.4
BcaB02g08320 Brassica carinata HOM05D003612 ORTHO05D004323 2.8e-09 64.7 45 62.2
BcaNung07094 Brassica carinata HOM05D003612 ORTHO05D004323 2.8e-09 64.7 58 55.2
C08p32750 Brassica napus HOM05D003612 ORTHO05D004323 2.8e-09 64.7 58 55.2
BolC8t50886H Brassica oleracea HOM05D003612 ORTHO05D004323 2.8e-09 64.7 58 55.2
AT3G02370 Arabidopsis thaliana HOM05D003612 ORTHO05D004323 4.7e-09 63.9 53 52.8
A04p03190 Brassica napus HOM05D003612 ORTHO05D004323 1.1e-08 62.8 55 52.7
BraA04t16040Z Brassica rapa HOM05D003612 ORTHO05D004323 1.1e-08 62.8 55 52.7
Thhalv10006455m.g Eutrema salsugineum HOM05D003612 ORTHO05D004323 1.4e-08 62.4 53 58.5
Thhalv10009639m.g Eutrema salsugineum HOM05D003612 ORTHO05D004323 1.4e-08 62.4 49 59.2
Thhalv10008553m.g Eutrema salsugineum HOM05D003612 ORTHO05D004323 4.0e-08 60.8 53 58.5
BcaC02g09930 Brassica carinata HOM05D003612 ORTHO05D004323 5.2e-08 60.5 55 50.9
C04p35070 Brassica napus HOM05D003612 ORTHO05D004323 5.2e-08 60.5 55 50.9
BolC4t25063H Brassica oleracea HOM05D003612 ORTHO05D004323 5.2e-08 60.5 55 50.9
Aa31LG10G12210 Aethionema arabicum HOM05D000708 ORTHO05D004323 1.5e-07 58.9 50 52.0
Aa31LG1G13790 Aethionema arabicum HOM05D003612 ORTHO05D004323 2.0e-07 58.5 50 54.0


User provided reference genes

Program Settings