Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaB03g14108 Brassica carinata HOM05D003839 ORTHO05D003352 3.6e-48 194.5 92 100.0
BcaB06g26117 Brassica carinata HOM05D003839 ORTHO05D003352 6.3e-21 104.0 82 57.3
BraA02t07568Z Brassica rapa HOM05D008292 ORTHO05D003352 6.5e-18 94.0 87 51.7
BraA08t34532Z Brassica rapa HOM05D003839 ORTHO05D003352 3.2e-17 91.7 85 48.2
A05p03580 Brassica napus HOM05D003839 ORTHO05D003352 4.2e-17 91.3 87 50.6
BcaB02g06630 Brassica carinata HOM05D003839 ORTHO05D003352 2.9e-10 68.6 74 41.9
C08p34220 Brassica napus HOM05D003839 ORTHO05D003352 5.0e-10 67.8 74 44.6
BolC8t51019H Brassica oleracea HOM05D003839 ORTHO05D003352 5.0e-10 67.8 74 44.6
BcaC02g10611 Brassica carinata HOM05D003839 ORTHO05D003352 8.6e-10 67.0 85 43.5
C03p63070 Brassica napus HOM05D003839 ORTHO05D003352 1.1e-09 66.6 86 36.0
C07p29940 Brassica napus HOM05D003839 ORTHO05D003352 1.1e-09 66.6 74 44.6
Thhalv10002164m.g Eutrema salsugineum HOM05D003839 ORTHO05D003352 2.5e-09 65.5 71 38.0
BcaNung02469 Brassica carinata HOM05D003839 ORTHO05D003352 3.3e-09 65.1 69 40.6
C07p40670 Brassica napus HOM05D003839 ORTHO05D003352 3.3e-09 65.1 69 40.6
Thhalv10005434m.g Eutrema salsugineum HOM05D003839 ORTHO05D003352 5.6e-09 64.3 69 36.2
A05p21290 Brassica napus HOM05D003839 ORTHO05D003352 1.2e-08 63.2 86 34.9
BraA05t21037Z Brassica rapa HOM05D003839 ORTHO05D003352 1.2e-08 63.2 86 34.9
BcaC05g27601 Brassica carinata HOM05D003839 ORTHO05D003352 1.6e-08 62.8 86 34.9
C05p35870 Brassica napus HOM05D003839 ORTHO05D003352 1.6e-08 62.8 86 34.9
BolC5t32306H Brassica oleracea HOM05D003839 ORTHO05D003352 1.6e-08 62.8 86 34.9
BcaC05g29109 Brassica carinata HOM05D003839 ORTHO05D003352 2.1e-08 62.4 86 34.9
C05p53370 Brassica napus HOM05D003839 ORTHO05D003352 2.1e-08 62.4 86 34.9
BcaC06g33695 Brassica carinata HOM05D003839 ORTHO05D003352 3.6e-08 61.6 86 34.9
BcaC09g50233 Brassica carinata HOM05D003839 ORTHO05D003352 3.6e-08 61.6 86 34.9
A02p28670 Brassica napus HOM05D003839 ORTHO05D003352 3.6e-08 61.6 86 36.0
C03p63060 Brassica napus HOM05D003839 ORTHO05D003352 3.6e-08 61.6 86 34.9
BraA02t07902Z Brassica rapa HOM05D003839 ORTHO05D003352 3.6e-08 61.6 86 36.0
C09p23320 Brassica napus HOM05D003839 ORTHO05D003352 4.7e-08 61.2 86 34.9
Thhalv10003316m.g Eutrema salsugineum HOM05D003839 ORTHO05D003352 4.7e-08 61.2 71 33.8
BcaB05g24307 Brassica carinata HOM05D003839 ORTHO05D003352 6.1e-08 60.8 74 36.5
BcaC01g02162 Brassica carinata HOM05D003839 ORTHO05D003352 6.1e-08 60.8 87 37.9
C02p27640 Brassica napus HOM05D003839 ORTHO05D003352 6.1e-08 60.8 86 34.9
BolC8t48491H Brassica oleracea HOM05D003839 ORTHO05D003352 6.1e-08 60.8 69 37.7
BraA01t02837Z Brassica rapa HOM05D003839 ORTHO05D003352 1.0e-07 60.1 86 33.7
BolC5t34007H Brassica oleracea HOM05D003839 ORTHO05D003352 1.4e-07 59.7 85 34.1
Thhalv10005441m.g Eutrema salsugineum HOM05D003839 ORTHO05D003352 1.4e-07 59.7 74 33.8
A03p67960 Brassica napus HOM05D003839 ORTHO05D003352 1.8e-07 59.3 69 34.8
A09p20270 Brassica napus HOM05D003839 ORTHO05D003352 2.3e-07 58.9 69 34.8
C05p32830 Brassica napus HOM05D003839 ORTHO05D003352 2.3e-07 58.9 65 38.5
C05p53340 Brassica napus HOM05D003839 ORTHO05D003352 2.3e-07 58.9 86 33.7
C09p21410 Brassica napus HOM05D003839 ORTHO05D003352 2.3e-07 58.9 69 36.2
C02p24590 Brassica napus HOM05D003839 ORTHO05D003352 3.0e-07 58.5 69 36.2
BraA07t28801Z Brassica rapa HOM05D003839 ORTHO05D003352 3.0e-07 58.5 69 34.8
BcaB01g00514 Brassica carinata HOM05D003839 ORTHO05D003352 5.2e-07 57.8 87 34.5
A09p19700 Brassica napus HOM05D003839 ORTHO05D003352 6.8e-07 57.4 69 33.3
BraA02t07279Z Brassica rapa HOM05D003839 ORTHO05D003352 6.8e-07 57.4 69 33.3
BcaB01g01517 Brassica carinata HOM05D003839 ORTHO05D003352 8.9e-07 57.0 69 37.7
BcaC03g15389 Brassica carinata HOM05D003839 ORTHO05D003352 8.9e-07 57.0 69 37.7
BcaC03g16634 Brassica carinata HOM05D003839 ORTHO05D003352 8.9e-07 57.0 69 37.7
BolC7t43565H Brassica oleracea HOM05D003839 ORTHO05D003352 8.9e-07 57.0 69 37.7
BcaB04g18348 Brassica carinata HOM05D003839 ORTHO05D003352 1.5e-06 56.2 69 37.7
BcaC08g44791 Brassica carinata HOM05D003839 ORTHO05D003352 3.4e-06 55.1 74 35.1
C09p49180 Brassica napus HOM05D003839 ORTHO05D003352 3.4e-06 55.1 60 40.0
BraA01t02749Z Brassica rapa HOM05D003839 ORTHO05D003352 5.7e-06 54.3 86 33.7
BraA05t20816Z Brassica rapa HOM05D003839 ORTHO05D020172 7.5e-06 53.9 85 41.2
BcaB02g06777 Brassica carinata HOM05D003839 ORTHO05D003352 9.8e-06 53.5 69 39.1
BcaB02g07569 Brassica carinata HOM05D003839 ORTHO05D003352 9.8e-06 53.5 69 36.2
A03p53810 Brassica napus HOM05D000357 ORTHO05D000242 9.8e-06 53.5 74 35.1
A03p53820 Brassica napus HOM05D000943 ORTHO05D002475 9.8e-06 53.5 69 37.7


User provided reference genes

Program Settings