Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaB03g13829 Brassica carinata HOM05D003675 ORTHO05D004318 2.1e-149 532.3 268 100.0
A07p09940 Brassica napus HOM05D003675 ORTHO05D004318 2.1e-149 532.3 268 100.0
BraA07t28783Z Brassica rapa HOM05D003675 ORTHO05D004318 2.1e-149 532.3 268 100.0
C07p15140 Brassica napus HOM05D003675 ORTHO05D004318 4.7e-149 531.2 268 99.6
BolC7t42018H Brassica oleracea HOM05D003675 ORTHO05D004318 4.7e-149 531.2 268 99.6
A08p24460 Brassica napus HOM05D003675 ORTHO05D004318 1.8e-148 529.3 268 99.3
BraA08t34402Z Brassica rapa HOM05D003675 ORTHO05D004318 1.8e-148 529.3 268 99.3
BcaC01g00192 Brassica carinata HOM05D003675 ORTHO05D004318 6.7e-148 527.3 268 98.9
C03p76760 Brassica napus HOM05D003675 ORTHO05D004318 6.7e-148 527.3 268 98.9
BolC3t19930H Brassica oleracea HOM05D003675 ORTHO05D004318 1.5e-147 526.2 268 98.5
BcaNung05260 Brassica carinata HOM05D003675 ORTHO05D004318 4.4e-147 524.6 268 98.5
CARHR029820 Cardamine hirsuta HOM05D003675 ORTHO05D004318 1.7e-146 522.7 268 98.1
AL1G44390 Arabidopsis lyrata HOM05D003675 ORTHO05D004318 2.2e-146 522.3 268 98.1
Thhalv10006695m.g Eutrema salsugineum HOM05D003675 ORTHO05D004318 2.2e-146 522.3 268 98.1
Sp1g26270 Schrenkiella parvula HOM05D003675 ORTHO05D004318 3.7e-146 521.5 268 97.8
Carub.0001s2862 Capsella rubella HOM05D003675 ORTHO05D004318 6.3e-146 520.8 268 97.4
AT1G30450 Arabidopsis thaliana HOM05D003675 ORTHO05D004318 8.2e-146 520.4 268 97.8
Aa31LG6G11710 Aethionema arabicum HOM05D003675 ORTHO05D004318 1.5e-142 509.6 268 95.1
Aa31LG10G6660 Aethionema arabicum HOM05D003675 ORTHO05D004318 4.5e-128 461.5 268 87.3
Eucgr.D00196 Eucalyptus grandis HOM05D003675 ORTHO05D004318 7.8e-128 460.7 272 85.7
Actinidia07469 Actinidia chinensis HOM05D003675 ORTHO05D004318 1.0e-127 460.3 272 85.3
CSS0048327 Camellia sinensis var. sinensis HOM05D003675 ORTHO05D004318 2.3e-127 459.1 272 84.2
QL05p053600 Quercus lobata HOM05D003675 ORTHO05D004318 2.9e-127 458.8 271 83.8
Rhsim13G0119800 Rhododendron simsii HOM05D003675 ORTHO05D004318 3.8e-127 458.4 272 84.6
Atru.chr10.917 Acer truncatum HOM05D003675 ORTHO05D004318 5.0e-127 458.0 272 83.1
Atru.chr10.925 Acer truncatum HOM05D003675 ORTHO05D004318 5.0e-127 458.0 272 83.1
Nn8g39842 Nelumbo nucifera HOM05D003675 ORTHO05D004318 5.0e-127 458.0 272 84.2
Thecc.02G011900 Theobroma cacao HOM05D003675 ORTHO05D004318 5.0e-127 458.0 272 84.2
FAN16G2870 Fragaria x ananassa HOM05D003675 ORTHO05D004318 6.6e-127 457.6 272 83.8
vmacro03400 Vaccinium macrocarpon HOM05D003675 ORTHO05D004318 6.6e-127 457.6 272 84.6
GSVIVG01021607001 Vitis vinifera HOM05D003675 ORTHO05D004318 6.6e-127 457.6 272 84.2
FvH4_3g09910 Fragaria vesca HOM05D003675 ORTHO05D004318 8.6e-127 457.2 272 83.5
FAN11G0336 Fragaria x ananassa HOM05D003675 ORTHO05D004318 8.6e-127 457.2 272 83.5
CiPaw.09G116500 Carya illinoinensis HOM05D003675 ORTHO05D004318 1.5e-126 456.4 272 84.6
CiPaw.10G086400 Carya illinoinensis HOM05D003675 ORTHO05D004318 1.9e-126 456.1 272 84.6
Duzib052G0595 Durio zibethinus HOM05D003675 ORTHO05D004318 3.3e-126 455.3 272 83.5
Manes.06G060500 Manihot esculenta HOM05D003675 ORTHO05D004318 3.3e-126 455.3 272 84.6
PGR083G0730 Punica granatum HOM05D003675 ORTHO05D004318 3.3e-126 455.3 274 83.6
RcHm_v2.0_Chr5g0015611 Rosa chinensis HOM05D003675 ORTHO05D004318 3.3e-126 455.3 272 83.5
Haze_05761 Corylus avellana HOM05D003675 ORTHO05D004318 4.3e-126 454.9 272 83.1
Duzib132G0867 Durio zibethinus HOM05D003675 ORTHO05D004318 4.3e-126 454.9 272 83.1
Nitab4.5_0006732g0010 Nicotiana tabacum HOM05D003675 ORTHO05D004318 5.6e-126 454.5 271 83.4
PSO675G2215 Papaver somniferum HOM05D003675 ORTHO05D004318 5.6e-126 454.5 273 82.1
COL.COLO4_17678 Corchorus olitorius HOM05D003675 ORTHO05D004318 7.3e-126 454.1 272 83.1
TWI53G0160 Tripterygium wilfordii HOM05D003675 ORTHO05D004318 7.3e-126 454.1 272 83.8
FAN21G3951 Fragaria x ananassa HOM05D003675 ORTHO05D004318 9.5e-126 453.8 272 82.7
Cpa.g.sc17.78 Carica papaya HOM05D003675 ORTHO05D004318 1.2e-125 453.4 271 82.7
Cfa000847 Carpinus fangiana HOM05D003675 ORTHO05D004318 1.2e-125 453.4 272 83.1
MD10G1254500 Malus domestica HOM05D003675 ORTHO05D004318 1.2e-125 453.4 272 83.1
SGA_v2.0_scaffold51G18648 Striga asiatica HOM05D003675 ORTHO05D004318 1.2e-125 453.4 273 84.6
Ciclev10014154m.g Citrus clementina HOM05D003675 ORTHO05D004318 1.6e-125 453.0 272 83.5
PSO675G7364 Papaver somniferum HOM05D003675 ORTHO05D004318 1.6e-125 453.0 273 81.7
Duzib248G0664 Durio zibethinus HOM05D003675 ORTHO05D004318 2.1e-125 452.6 272 83.1
MELO3C002803.2 Cucumis melo HOM05D003675 ORTHO05D004318 4.7e-125 451.4 271 83.0
Dinv15908 Davidia involucrata HOM05D003675 ORTHO05D004318 4.7e-125 451.4 272 83.1
Lj2A328G59 Lonicera japonica HOM05D003675 ORTHO05D004318 8.0e-125 450.7 273 82.8
Lalb_Chr08g0233231 Lupinus albus HOM05D003675 ORTHO05D004318 8.0e-125 450.7 272 82.7
TWI73G0281 Tripterygium wilfordii HOM05D003675 ORTHO05D004318 1.0e-124 450.3 272 82.7
Oeu015186.1 Olea europaea HOM05D003675 ORTHO05D004318 1.4e-124 449.9 271 82.7
CsaV3_1G037400 Cucumis sativus L. HOM05D003675 ORTHO05D004318 1.8e-124 449.5 272 83.1
Migut.H01338 Erythranthe guttata HOM05D003675 ORTHO05D004318 1.8e-124 449.5 271 82.7
Cc09_g08810 Coffea canephora HOM05D003675 ORTHO05D004318 2.3e-124 449.1 271 82.7
Ah.12g053620 Amaranthus hybridus HOM05D003675 ORTHO05D004318 3.0e-124 448.7 271 80.1
CAN.G1058.33 Capsicum annuum HOM05D003675 ORTHO05D004318 3.0e-124 448.7 271 81.9
ClCG03G006310 Citrullus lanatus HOM05D003675 ORTHO05D004318 3.0e-124 448.7 271 82.7
FAN25G0162 Fragaria x ananassa HOM05D003675 ORTHO05D004318 3.0e-124 448.7 268 83.2
Sed0018861 Sechium edule HOM05D003675 ORTHO05D004318 4.0e-124 448.4 271 81.9
Solyc02g021620.3 Solanum lycopersicum HOM05D003675 ORTHO05D004318 4.0e-124 448.4 271 82.3
Sopen02g006170 Solanum pennellii HOM05D003675 ORTHO05D004318 4.0e-124 448.4 271 82.3
DCAR_003868 Daucus carota HOM05D003675 ORTHO05D004318 5.2e-124 448.0 272 82.7
MD05G1275000 Malus domestica HOM05D003675 ORTHO05D004318 5.2e-124 448.0 270 82.6
Manes.14G134400 Manihot esculenta HOM05D003675 ORTHO05D004318 5.2e-124 448.0 272 82.7
Prupe.4G088900 Prunus persica HOM05D003675 ORTHO05D004318 5.2e-124 448.0 272 81.6
Lj1C1164G14 Lonicera japonica HOM05D003675 ORTHO05D004318 8.9e-124 447.2 272 81.2
Aqoxy3G00253 Aquilegia oxysepala HOM05D003675 ORTHO05D004318 1.5e-123 446.4 272 82.0
HanXRQChr08g0209981 Helianthus annuus HOM05D003675 ORTHO05D004318 1.5e-123 446.4 277 80.5
Hund06713 Selenicereus undatus HOM05D003675 ORTHO05D004318 2.0e-123 446.0 271 81.5
PGSC0003DMG400003173 Solanum tuberosum HOM05D003675 ORTHO05D004318 2.0e-123 446.0 271 81.9
Peaxi162Scf00155g01015 Petunia axillaris HOM05D003675 ORTHO05D004318 4.4e-123 444.9 270 81.5
Gohir.D12G044700 Gossypium hirsutum HOM05D003675 ORTHO05D004318 5.8e-123 444.5 272 80.5
Gorai.008G047100 Gossypium raimondii HOM05D003675 ORTHO05D004318 5.8e-123 444.5 272 80.5
Potri.011G090900 Populus trichocarpa HOM05D003675 ORTHO05D004318 9.8e-123 443.7 272 82.4
ECA233G3702 Erigeron canadensis HOM05D003675 ORTHO05D004318 1.3e-122 443.4 277 80.1
Sed0017115 Sechium edule HOM05D003675 ORTHO05D004318 1.3e-122 443.4 271 80.1
CANSAT35G1002 Cannabis sativa HOM05D003675 ORTHO05D004318 2.9e-122 442.2 272 80.9
DCAR_027870 Daucus carota HOM05D003675 ORTHO05D004318 2.9e-122 442.2 272 80.9
Gohir.A03G216500 Gossypium hirsutum HOM05D003675 ORTHO05D004318 4.9e-122 441.4 271 80.4
Os08g0323700 Oryza sativa ssp. japonica HOM05D003675 ORTHO05D004318 4.9e-122 441.4 275 80.7
Potri.001G357600 Populus trichocarpa HOM05D003675 ORTHO05D004318 4.9e-122 441.4 271 82.7
Gohir.D02G238100 Gossypium hirsutum HOM05D003675 ORTHO05D004318 6.4e-122 441.0 271 80.4
Gohir.D02G239100 Gossypium hirsutum HOM05D003675 ORTHO05D004318 6.4e-122 441.0 271 80.4
Lalb_Chr11g0073421 Lupinus albus HOM05D003675 ORTHO05D004318 6.4e-122 441.0 272 80.9
Sabra11G0086100 Salix brachista HOM05D003675 ORTHO05D004318 6.4e-122 441.0 272 82.0
MBI18_g11285_MAGBIO Magnolia biondii HOM05D003675 ORTHO05D004318 8.3e-122 440.7 272 80.9
PGSC0003DMG400021101 Solanum tuberosum HOM05D003675 ORTHO05D004318 8.3e-122 440.7 271 79.7
EL10Ac8g20233 Beta vulgaris HOM05D003675 ORTHO05D004318 1.1e-121 440.3 272 79.4
Gorai.005G266600 Gossypium raimondii HOM05D003675 ORTHO05D004318 1.1e-121 440.3 271 80.1
Lsat_1_v5_gn_8_147381 Lactuca sativa HOM05D003675 ORTHO05D004318 1.1e-121 440.3 268 81.7
Solyc02g070290.3 Solanum lycopersicum HOM05D003675 ORTHO05D004318 1.9e-121 439.5 271 79.7
Sopen02g019380 Solanum pennellii HOM05D003675 ORTHO05D004318 1.9e-121 439.5 271 79.7
Glyma.15G193400 Glycine max HOM05D003675 ORTHO05D004318 2.4e-121 439.1 274 79.9
Zm00001eb286030 Zea mays HOM05D003675 ORTHO05D004318 3.2e-121 438.7 275 80.7
Gohir.A12G045566 Gossypium hirsutum HOM05D003675 ORTHO05D004318 4.1e-121 438.3 272 79.8
VMungo1309G0958 Vigna mungo HOM05D003675 ORTHO05D004318 4.1e-121 438.3 274 80.7
AUR62015052 Chenopodium quinoa HOM05D003675 ORTHO05D004318 5.4e-121 438.0 272 78.7
Medtr2g048510 Medicago truncatula HOM05D003675 ORTHO05D004318 5.4e-121 438.0 272 80.1
TAR627G0374 Trochodendron aralioides HOM05D003675 ORTHO05D004318 5.4e-121 438.0 272 79.8
Lj6g0000180 Lotus japonicus HOM05D003675 ORTHO05D004318 7.0e-121 437.6 272 80.1
Phvul.009G216800 Phaseolus vulgaris HOM05D003675 ORTHO05D004318 9.2e-121 437.2 274 80.3
AUR62014439 Chenopodium quinoa HOM05D003675 ORTHO05D004318 1.2e-120 436.8 272 78.3
Sabra16G0235300 Salix brachista HOM05D003675 ORTHO05D004318 2.7e-120 435.6 269 81.8
AUR62034562 Chenopodium quinoa HOM05D003675 ORTHO05D004318 3.5e-120 435.3 272 77.9
Glyma.09G085300 Glycine max HOM05D003675 ORTHO05D004318 6.0e-120 434.5 275 78.5
Nn2g15671 Nelumbo nucifera HOM05D003675 ORTHO05D004318 7.8e-120 434.1 272 80.1
Ca_02515_v3 Cicer arietinum L. HOM05D003675 ORTHO05D004318 1.7e-119 433.0 272 79.4
vmacro23352 Vaccinium macrocarpon HOM05D003675 ORTHO05D004318 1.7e-119 433.0 258 84.1
Sc24g0001490 Simmondsia chinensis HOM05D003675 ORTHO05D004318 6.6e-119 431.0 272 77.9
Zm00001eb347460 Zea mays HOM05D003675 ORTHO05D004318 6.6e-119 431.0 275 80.0
arahy.Tifrunner.gnm1.ann1.71J8LW Arachis hypogaea HOM05D003675 ORTHO05D004318 8.6e-119 430.6 271 78.6
arahy.Tifrunner.gnm1.ann1.F8HCHG Arachis hypogaea HOM05D003675 ORTHO05D004318 8.6e-119 430.6 271 78.6
arahy.Tifrunner.gnm1.ann1.119T42 Arachis hypogaea HOM05D003675 ORTHO05D004318 1.1e-118 430.3 271 78.6
CAN.G660.39 Capsicum annuum HOM05D003675 ORTHO05D004318 2.5e-118 429.1 271 79.0
Lsat_1_v5_gn_4_241 Lactuca sativa HOM05D003675 ORTHO05D004318 4.0e-116 421.8 272 77.2
Os01g0304100 Oryza sativa ssp. japonica HOM05D003675 ORTHO05D004318 5.2e-116 421.4 270 78.9
ATR1098G088 Amborella trichopoda HOM05D003675 ORTHO05D004318 1.5e-115 419.9 268 78.7
SHI20675 Sapria himalayana HOM05D003675 ORTHO05D000023 1.5e-115 419.9 276 77.5
CDE04G1522 Ceratophyllum demersum HOM05D003675 ORTHO05D004318 1.9e-113 412.9 268 76.5
HPP92_017213 Vanilla planifolia HOM05D003675 ORTHO05D004318 7.8e-112 407.5 264 76.9
HPP92_010716 Vanilla planifolia HOM05D003675 ORTHO05D004318 1.0e-111 407.1 270 76.3
unitig_37.g12081 Utricularia gibba HOM05D003675 ORTHO05D004318 1.1e-110 403.7 274 74.8
Zm00001eb197200 Zea mays HOM05D003675 ORTHO05D004318 3.3e-110 402.1 273 74.0
TAR626G0983 Trochodendron aralioides HOM05D003675 ORTHO05D004318 5.6e-110 401.4 247 81.4
MBI18_g34277_MAGBIO Magnolia biondii HOM05D003675 ORTHO05D004318 9.5e-110 400.6 272 75.7
HanXRQChr12g0385671 Helianthus annuus HOM05D003675 ORTHO05D004318 2.8e-109 399.1 268 76.1
SEGI_15305 Sequoiadendron giganteum HOM05D003675 ORTHO05D004318 4.7e-109 398.3 272 73.9
SGA_v2.0_scaffold106G30664 Striga asiatica HOM05D003675 ORTHO05D004318 5.2e-108 394.8 247 81.0
CDE07G0962 Ceratophyllum demersum HOM05D003675 ORTHO05D004318 5.8e-107 391.3 251 77.3
Mapoly0050s0083 Marchantia polymorpha HOM05D003675 ORTHO05D004318 1.5e-102 376.7 274 70.4
SMO141G0147 Selaginella moellendorffii HOM05D003675 ORTHO05D004318 3.3e-102 375.6 270 69.6
AagrBONN_evm.TU.Sc2ySwM_344.2138 Anthoceros agrestis HOM05D003675 ORTHO05D004318 2.0e-99 366.3 273 69.2
Dinv32189 Davidia involucrata HOM05D003675 ORTHO05D004318 7.6e-99 364.4 224 81.2
Pp3c2_27310 Physcomitrium patens HOM05D003675 ORTHO05D004318 6.6e-95 351.3 276 65.6
CBR_g27771 Chara braunii HOM05D003675 ORTHO05D004318 8.7e-95 350.9 267 64.8
Nitab4.5_0000100g0150 Nicotiana tabacum HOM05D003675 ORTHO05D004318 6.9e-92 341.3 216 80.6
Pp3c13_9730 Physcomitrium patens HOM05D003675 ORTHO05D004318 7.6e-91 337.8 276 63.0
Pp3c13_9737 Physcomitrium patens HOM05D003675 ORTHO05D004318 7.6e-91 337.8 276 63.0
Pp3c1_10530 Physcomitrium patens HOM05D003675 ORTHO05D004318 7.6e-91 337.8 274 63.1
HPP92_010708 Vanilla planifolia HOM05D003675 ORTHO05D004318 3.3e-78 295.8 203 71.9
Psat1g019680 Pisum sativum HOM05D003675 ORTHO05D004318 1.7e-74 283.5 276 58.0
RcHm_v2.0_Chr5g0015801 Rosa chinensis HOM05D003675 ORTHO05D004318 1.2e-72 277.3 185 78.9
Psat3g081440 Pisum sativum HOM05D004114 ORTHO05D004667 1.3e-71 273.9 154 84.4
arahy.Tifrunner.gnm1.ann1.DS3C7B Arachis hypogaea HOM05D003675 ORTHO05D004318 1.1e-65 254.2 157 79.0
Nitab4.5_0007290g0030 Nicotiana tabacum HOM05D003675 ORTHO05D004318 4.6e-56 222.2 171 69.6
Psat3g081480 Pisum sativum HOM05D003675 ORTHO05D004318 5.9e-43 178.7 186 52.7
PRCOL_00004754 Prasinoderma coloniale HOM05D003675 ORTHO05D004318 1.3e-37 161.0 361 33.2
Pp3c6_17940 Physcomitrium patens HOM05D003675 ORTHO05D004318 5.5e-25 119.0 72 70.8
Nitab4.5_0005814g0040 Nicotiana tabacum HOM05D003675 ORTHO05D004318 2.7e-24 116.7 64 85.9
Mapoly0078s0036 Marchantia polymorpha HOM05D003675 ORTHO05D004318 9.8e-22 108.2 141 36.2
Pp3c1_28340 Physcomitrium patens HOM05D003675 ORTHO05D004318 9.1e-20 101.7 141 35.5
SMO304G0144 Selaginella moellendorffii HOM05D003675 ORTHO05D004318 3.5e-19 99.8 146 32.9
AagrBONN_evm.TU.Sc2ySwM_362.1613 Anthoceros agrestis HOM05D003675 ORTHO05D004318 4.5e-19 99.4 141 34.8
Pp3c17_10600 Physcomitrium patens HOM05D003675 ORTHO05D004318 4.5e-19 99.4 135 34.8
Pp3c14_11040 Physcomitrium patens HOM05D003675 ORTHO05D004318 2.3e-18 97.1 135 33.3
Sc03g0004140 Simmondsia chinensis HOM05D003675 ORTHO05D004318 8.6e-18 95.1 84 61.9
MCO15G428 Micromonas commoda HOM05D003675 ORTHO05D004318 9.5e-17 91.7 160 31.9
PRCOL_00002134 Prasinoderma coloniale HOM05D003675 ORTHO05D004318 1.2e-16 91.3 141 32.6
AUR62041920 Chenopodium quinoa HOM05D003142 ORTHO05D003600 1.0e-07 61.6 53 66.0


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