Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaB03g13724 Brassica carinata HOM05D001357 ORTHO05D001224 1.5e-90 336.7 233 100.0
BcaB07g32948 Brassica carinata HOM05D001357 ORTHO05D001224 4.1e-40 169.1 239 49.4
Sp1g28370 Schrenkiella parvula HOM05D001357 ORTHO05D001224 5.3e-40 168.7 160 63.1
AL1G46780 Arabidopsis lyrata HOM05D001357 ORTHO05D001224 1.5e-39 167.2 254 49.2
A09p33680 Brassica napus HOM05D001357 ORTHO05D001224 1.5e-39 167.2 242 49.6
BraA09t38917Z Brassica rapa HOM05D001357 ORTHO05D001224 1.5e-39 167.2 242 49.6
BcaC05g27846 Brassica carinata HOM05D001357 ORTHO05D001224 3.4e-39 166.0 193 57.0
Carub.0001s3094 Capsella rubella HOM05D001357 ORTHO05D001224 5.0e-38 162.2 238 48.3
THA.LOC104807960 Tarenaya hassleriana HOM05D001357 ORTHO05D001224 2.7e-36 156.4 255 43.1
BcaC05g27291 Brassica carinata HOM05D001357 ORTHO05D001224 4.6e-36 155.6 242 48.8
CARHR031980 Cardamine hirsuta HOM05D001357 ORTHO05D001224 4.6e-36 155.6 238 47.5
C05p31970 Brassica napus HOM05D001357 ORTHO05D001224 1.0e-35 154.5 244 48.0
BolC5t31923H Brassica oleracea HOM05D001357 ORTHO05D001224 1.0e-35 154.5 244 48.0
Thhalv10006944m.g Eutrema salsugineum HOM05D001357 ORTHO05D001224 5.1e-35 152.1 254 44.9
THA.LOC104812745 Tarenaya hassleriana HOM05D001357 ORTHO05D001224 1.9e-34 150.2 180 51.7
AT1G32530 Arabidopsis thaliana HOM05D001357 ORTHO05D001224 1.4e-32 144.1 191 52.9
AL4G31360 Arabidopsis lyrata HOM05D001357 ORTHO05D001224 4.5e-31 139.0 240 42.5
Aa31LG9G15340 Aethionema arabicum HOM05D001357 ORTHO05D001224 1.3e-30 137.5 237 41.4
Thhalv10016336m.g Eutrema salsugineum HOM05D001357 ORTHO05D001224 6.1e-28 128.6 255 38.4
Carub.0004s1702 Capsella rubella HOM05D001357 ORTHO05D001224 1.4e-27 127.5 240 40.8
AT2G35330 Arabidopsis thaliana HOM05D001357 ORTHO05D001224 2.3e-27 126.7 230 40.9
TPR.G28656 Trifolium pratense HOM05D001357 ORTHO05D001224 8.8e-27 124.8 155 49.7
Ca_22065_v3 Cicer arietinum L. HOM05D001357 ORTHO05D001224 1.1e-26 124.4 155 50.3
Medtr4g098560 Medicago truncatula HOM05D001357 ORTHO05D001224 1.1e-26 124.4 155 49.0
Sc07g0008760 Simmondsia chinensis HOM05D001357 ORTHO05D001224 4.4e-26 122.5 179 45.3
arahy.Tifrunner.gnm1.ann1.L5SQ1T Arachis hypogaea HOM05D001357 ORTHO05D001224 2.8e-25 119.8 190 42.6
Psat4g079320 Pisum sativum HOM05D001357 ORTHO05D001224 6.3e-25 118.6 155 47.1
arahy.Tifrunner.gnm1.ann1.WDEP49 Arachis hypogaea HOM05D001357 ORTHO05D001224 1.4e-24 117.5 190 41.6
Thhalv10010162m.g Eutrema salsugineum HOM05D001357 ORTHO05D001224 1.8e-24 117.1 242 38.8
Lj4g0020023 Lotus japonicus HOM05D001357 ORTHO05D001224 3.1e-24 116.3 185 43.8
FAN13G3282 Fragaria x ananassa HOM05D001357 ORTHO05D001224 6.9e-24 115.2 158 48.7
EL10Ac5g12173 Beta vulgaris HOM05D001357 ORTHO05D001224 9.1e-24 114.8 178 43.3
FAN04G3086 Fragaria x ananassa HOM05D001357 ORTHO05D001224 9.1e-24 114.8 158 48.7
RcHm_v2.0_Chr7g0209211 Rosa chinensis HOM05D001357 ORTHO05D001224 1.2e-23 114.4 156 46.8
FAN08G0193 Fragaria x ananassa HOM05D001357 ORTHO05D001224 1.5e-23 114.0 125 53.6
Ah.12g054570 Amaranthus hybridus HOM05D001357 ORTHO05D001224 2.0e-23 113.6 165 46.7
Cpa.g.sc665.2 Carica papaya HOM05D001357 ORTHO05D001224 2.0e-23 113.6 154 48.7
Sp4g17530 Schrenkiella parvula HOM05D001357 ORTHO05D001224 2.0e-23 113.6 213 39.9
VMungo0251G1991 Vigna mungo HOM05D001357 ORTHO05D001224 2.0e-23 113.6 135 50.4
AUR62007241 Chenopodium quinoa HOM05D001357 ORTHO05D001224 2.6e-23 113.2 148 45.9
MD06G1032100 Malus domestica HOM05D001357 ORTHO05D001224 2.6e-23 113.2 123 54.5
Actinidia03385 Actinidia chinensis HOM05D001357 ORTHO05D001224 3.4e-23 112.8 185 39.5
Prupe.5G040000 Prunus persica HOM05D001357 ORTHO05D001224 3.4e-23 112.8 183 43.7
AUR62018759 Chenopodium quinoa HOM05D001357 ORTHO05D001224 4.5e-23 112.5 179 40.8
Phvul.003G229800 Phaseolus vulgaris HOM05D001357 ORTHO05D001224 4.5e-23 112.5 125 52.8
CiPaw.11G091600 Carya illinoinensis HOM05D001357 ORTHO05D001224 7.7e-23 111.7 183 43.2
Duzib205G0119 Durio zibethinus HOM05D001357 ORTHO05D001224 7.7e-23 111.7 123 51.2
FAN18G0885 Fragaria x ananassa HOM05D001357 ORTHO05D001224 7.7e-23 111.7 158 48.1
FvH4_5g21710 Fragaria vesca HOM05D001357 ORTHO05D001224 1.0e-22 111.3 158 48.1
Hund14420 Selenicereus undatus HOM05D001357 ORTHO05D001224 2.9e-22 109.8 195 41.5
Thecc.03G230600 Theobroma cacao HOM05D001357 ORTHO05D001224 3.8e-22 109.4 125 49.6
CARHR129480 Cardamine hirsuta HOM05D001357 ORTHO05D001224 5.0e-22 109.0 242 38.4
Glyma.17G154400 Glycine max HOM05D001357 ORTHO05D001224 5.0e-22 109.0 155 45.2
TWI60G0354 Tripterygium wilfordii HOM05D001357 ORTHO05D001224 5.0e-22 109.0 217 33.2
vmacro00340 Vaccinium macrocarpon HOM05D001357 ORTHO05D001224 5.0e-22 109.0 178 39.9
Glyma.05G112600 Glycine max HOM05D001357 ORTHO05D001224 1.1e-21 107.8 161 42.9
Gohir.A12G209300 Gossypium hirsutum HOM05D001357 ORTHO05D001224 1.4e-21 107.5 123 49.6
Gohir.D12G212000 Gossypium hirsutum HOM05D001357 ORTHO05D001224 1.4e-21 107.5 123 49.6
Gorai.008G227600 Gossypium raimondii HOM05D001357 ORTHO05D001224 1.4e-21 107.5 123 49.6
Rhsim11G0013300 Rhododendron simsii HOM05D001357 ORTHO05D001224 1.4e-21 107.5 178 41.0
QL12p006175 Quercus lobata HOM05D001357 ORTHO05D001224 2.5e-21 106.7 135 50.4
SGA_v2.0_scaffold253G45130 Striga asiatica HOM05D001357 ORTHO05D001224 3.2e-21 106.3 177 40.7
Ciclev10030828m.g Citrus clementina HOM05D001357 ORTHO05D001224 5.5e-21 105.5 120 48.3
Duzib084G0022 Durio zibethinus HOM05D001357 ORTHO05D001224 5.5e-21 105.5 119 49.6
Gohir.D03G170400 Gossypium hirsutum HOM05D001357 ORTHO05D001224 5.5e-21 105.5 123 48.8
COL.COLO4_17067 Corchorus olitorius HOM05D001357 ORTHO05D001224 7.2e-21 105.1 120 48.3
Dinv28936 Davidia involucrata HOM05D001357 ORTHO05D001224 7.2e-21 105.1 185 38.4
Gorai.003G180700 Gossypium raimondii HOM05D001357 ORTHO05D001224 7.2e-21 105.1 123 48.8
Sc22g0001470 Simmondsia chinensis HOM05D001357 ORTHO05D001224 9.4e-21 104.8 182 40.7
CsaV3_3G001870 Cucumis sativus L. HOM05D001357 ORTHO05D001224 1.6e-20 104.0 193 38.3
CSS0024345 Camellia sinensis var. sinensis HOM05D001357 ORTHO05D001224 2.1e-20 103.6 185 37.3
arahy.Tifrunner.gnm1.ann1.5XY2RS Arachis hypogaea HOM05D001357 ORTHO05D001224 2.7e-20 103.2 164 41.5
arahy.Tifrunner.gnm1.ann1.AR7ULQ Arachis hypogaea HOM05D001357 ORTHO05D001224 2.7e-20 103.2 164 41.5
Gohir.A03G001900 Gossypium hirsutum HOM05D001357 ORTHO05D001224 2.7e-20 103.2 123 48.0
MSTRG.25595 Avicennia marina HOM05D001357 ORTHO05D001224 3.6e-20 102.8 153 43.1
BcaB02g09439 Brassica carinata HOM05D001357 ORTHO05D001224 4.7e-20 102.4 165 41.8
Cc08_g02460 Coffea canephora HOM05D001357 ORTHO05D001224 4.7e-20 102.4 184 38.0
Atru.chr6.1746 Acer truncatum HOM05D001357 ORTHO05D001224 6.1e-20 102.1 120 50.0
Atru.chr6.1749 Acer truncatum HOM05D001357 ORTHO05D001224 6.1e-20 102.1 120 50.0
Potri.003G090000 Populus trichocarpa HOM05D001357 ORTHO05D001224 6.1e-20 102.1 123 49.6
unitig_26.g9701 Utricularia gibba HOM05D001357 ORTHO05D001224 6.1e-20 102.1 158 41.8
Medtr4g114950 Medicago truncatula HOM05D001357 ORTHO05D001224 1.8e-19 100.5 144 45.8
Sed0026328 Sechium edule HOM05D001357 ORTHO05D001224 1.8e-19 100.5 144 44.4
MSTRG.11994 Avicennia marina HOM05D001357 ORTHO05D001224 2.3e-19 100.1 186 40.3
MELO3C013861.2 Cucumis melo HOM05D001357 ORTHO05D001224 3.0e-19 99.8 193 37.3
Migut.A00780 Erythranthe guttata HOM05D001357 ORTHO05D001224 3.0e-19 99.8 175 38.9
Sabra01G0112600 Salix brachista HOM05D001357 ORTHO05D001224 3.9e-19 99.4 158 42.4
CiPaw.12G062100 Carya illinoinensis HOM05D001357 ORTHO05D001224 6.7e-19 98.6 135 45.9
ClCG10G001770 Citrullus lanatus HOM05D001357 ORTHO05D001224 6.7e-19 98.6 125 46.4
HanXRQChr06g0167351 Helianthus annuus HOM05D001357 ORTHO05D001224 1.1e-18 97.8 123 47.2
Glyma.11G042600 Glycine max HOM05D001357 ORTHO05D001224 1.5e-18 97.4 205 37.1
Sabra03G0060000 Salix brachista HOM05D001357 ORTHO05D001224 2.0e-18 97.1 123 47.2
Haze_08262 Corylus avellana HOM05D001357 ORTHO05D001224 2.6e-18 96.7 116 50.9
Lsat_1_v5_gn_3_16741 Lactuca sativa HOM05D001357 ORTHO05D001224 2.6e-18 96.7 154 40.9
Manes.17G014100 Manihot esculenta HOM05D001357 ORTHO05D001224 2.6e-18 96.7 118 49.2
Oeu049548.1 Olea europaea HOM05D001357 ORTHO05D001224 3.3e-18 96.3 118 47.5
Lalb_Chr05g0213991 Lupinus albus HOM05D001357 ORTHO05D001224 4.4e-18 95.9 191 39.8
BcaC02g11634 Brassica carinata HOM05D001357 ORTHO05D001224 5.7e-18 95.5 163 41.1
C04p12870 Brassica napus HOM05D001357 ORTHO05D001224 5.7e-18 95.5 163 41.1
BraA05t19985Z Brassica rapa HOM05D001357 ORTHO05D001224 9.7e-18 94.7 164 40.2
Lj2A242T74 Lonicera japonica HOM05D001357 ORTHO05D001224 9.7e-18 94.7 123 43.9
Lalb_Chr09g0323871 Lupinus albus HOM05D001357 ORTHO05D001224 9.7e-18 94.7 189 38.6
BolC4t22931H Brassica oleracea HOM05D001357 ORTHO05D001224 1.3e-17 94.4 163 41.1
Peaxi162Scf00695g00516 Petunia axillaris HOM05D001357 ORTHO05D001224 1.7e-17 94.0 125 47.2
Nitab4.5_0000804g0050 Nicotiana tabacum HOM05D001357 ORTHO05D001224 2.2e-17 93.6 127 47.2
Phvul.002G006400 Phaseolus vulgaris HOM05D001357 ORTHO05D001224 2.2e-17 93.6 191 40.3
ECA232G1637 Erigeron canadensis HOM05D001357 ORTHO05D001224 2.8e-17 93.2 127 44.1
Potri.001G144200 Populus trichocarpa HOM05D001357 ORTHO05D001224 3.7e-17 92.8 123 47.2
PGR031G1014 Punica granatum HOM05D001357 ORTHO05D001224 4.8e-17 92.4 122 45.1
A05p10470 Brassica napus HOM05D001357 ORTHO05D001224 8.2e-17 91.7 163 39.3
Nitab4.5_0000535g0020 Nicotiana tabacum HOM05D001357 ORTHO05D001224 1.1e-16 91.3 127 46.5
Manes.15G169400 Manihot esculenta HOM05D001357 ORTHO05D001224 1.4e-16 90.9 110 51.8
Peaxi162Scf00102g00519 Petunia axillaris HOM05D001357 ORTHO05D001224 2.4e-16 90.1 127 43.3
Hma1.2p1_0991F.1_g244975 Hydrangea macrophylla HOM05D001357 ORTHO05D001224 3.1e-16 89.7 123 43.1
Hma1.2p1_2785F.1_g328470 Hydrangea macrophylla HOM05D001357 ORTHO05D001224 3.1e-16 89.7 185 35.1
PGSC0003DMG400020519 Solanum tuberosum HOM05D001357 ORTHO05D001224 3.1e-16 89.7 176 36.9
VMungo1215G1117 Vigna mungo HOM05D001357 ORTHO05D001224 5.3e-16 89.0 123 46.3
Solyc08g006980.3 Solanum lycopersicum HOM05D001357 ORTHO05D001224 9.1e-16 88.2 183 35.5
Sopen08g002950 Solanum pennellii HOM05D001357 ORTHO05D001224 9.1e-16 88.2 183 35.5
Lj8C291T15 Lonicera japonica HOM05D001357 ORTHO05D001224 1.6e-15 87.4 120 43.3
Eucgr.D02184 Eucalyptus grandis HOM05D001357 ORTHO05D001224 5.0e-14 82.4 127 40.2
CSS0039848 Camellia sinensis var. sinensis HOM05D001357 ORTHO05D001224 8.5e-14 81.6 151 38.4
CSS0044588 Camellia sinensis var. sinensis HOM05D001357 ORTHO05D001224 8.5e-14 81.6 151 38.4
Lalb_Chr16g0386061 Lupinus albus HOM05D001357 ORTHO05D001224 1.9e-13 80.5 125 39.2
Nn1g00569 Nelumbo nucifera HOM05D001357 ORTHO05D001224 5.5e-13 79.0 122 39.3
Aqoxy3G02446 Aquilegia oxysepala HOM05D001357 ORTHO05D001224 9.4e-13 78.2 120 40.0
PSO063G7676 Papaver somniferum HOM05D001357 ORTHO05D001224 1.2e-12 77.8 124 40.3
ATR0049G028 Amborella trichopoda HOM05D001357 ORTHO05D001224 2.1e-12 77.0 123 38.2
C05p38440 Brassica napus HOM05D044546 ORTHO05D042235 8.0e-12 75.1 59 67.8
BolC5t32579H Brassica oleracea HOM05D044546 ORTHO05D042235 8.0e-12 75.1 59 67.8
PSO782G0194 Papaver somniferum HOM05D001357 ORTHO05D001224 1.4e-11 74.3 124 38.7
ECA240G0341 Erigeron canadensis HOM05D001357 ORTHO05D001224 1.8e-11 73.9 155 32.3
Lalb_Chr09g0329481 Lupinus albus HOM05D001357 ORTHO05D001224 4.0e-11 72.8 177 32.2
Cfa012414 Carpinus fangiana HOM05D001357 ORTHO05D001224 5.2e-11 72.4 72 54.2
CAN.G1659.2 Capsicum annuum HOM05D001357 ORTHO05D001224 1.2e-10 71.2 127 36.2
HPP92_027726 Vanilla planifolia HOM05D001357 ORTHO05D001224 1.5e-10 70.9 163 31.9
BcaB02g09451 Brassica carinata HOM05D001357 ORTHO05D001224 2.0e-10 70.5 101 43.6
BcaB02g09456 Brassica carinata HOM05D001357 ORTHO05D001224 2.0e-10 70.5 101 43.6
TAR629G2684 Trochodendron aralioides HOM05D001357 ORTHO05D001224 5.7e-10 68.9 147 34.0
CDE06G1440 Ceratophyllum demersum HOM05D001357 ORTHO05D001224 7.5e-10 68.6 117 35.9
Eucgr.E00293 Eucalyptus grandis HOM05D001357 ORTHO05D001224 9.7e-10 68.2 131 34.4
CDE12G0286 Ceratophyllum demersum HOM05D001357 ORTHO05D001224 1.3e-09 67.8 156 30.8
Haze_02946 Corylus avellana HOM05D001357 ORTHO05D001224 2.2e-09 67.0 154 32.5
Cfa010989 Carpinus fangiana HOM05D001357 ORTHO05D001224 3.7e-09 66.2 154 32.5
Hma1.2p1_0585F.1_g183640 Hydrangea macrophylla HOM05D001357 ORTHO05D001224 4.8e-09 65.9 118 39.0
Lj6C665T9 Lonicera japonica HOM05D001357 ORTHO05D001224 1.6e-07 60.8 134 35.1
PSO210G1685 Papaver somniferum HOM05D001357 ORTHO05D001224 1.6e-07 60.8 108 37.0
PSO832G0117 Papaver somniferum HOM05D001357 ORTHO05D001224 1.6e-07 60.8 108 37.0
MSTRG.17431 Avicennia marina HOM05D001357 ORTHO05D001224 2.0e-07 60.5 117 34.2
FAN15G1197 Fragaria x ananassa HOM05D001357 ORTHO05D001224 2.0e-07 60.5 165 33.3
FvH4_2g24221 Fragaria vesca HOM05D001357 ORTHO05D001224 4.5e-07 59.3 165 32.7
FAN20G0897 Fragaria x ananassa HOM05D001357 ORTHO05D001224 5.9e-07 58.9 110 38.2
ATR0626G193 Amborella trichopoda HOM05D001357 ORTHO05D001224 7.7e-07 58.5 166 31.9
SEGI_04144 Sequoiadendron giganteum HOM05D001357 ORTHO05D001224 1.0e-06 58.2 137 32.8
FAN27G1621 Fragaria x ananassa HOM05D001357 ORTHO05D001224 1.3e-06 57.8 110 37.3
ECA233G3905 Erigeron canadensis HOM05D001357 ORTHO05D001224 1.7e-06 57.4 148 29.7
FAN24G2124 Fragaria x ananassa HOM05D001357 ORTHO05D001224 1.7e-06 57.4 165 32.1
SalBow6G0084 Salvia bowleyana HOM05D001357 ORTHO05D001224 1.7e-06 57.4 116 33.6
Dinv32973 Davidia involucrata HOM05D001357 ORTHO05D001224 2.9e-06 56.6 103 35.9
C05p38450 Brassica napus HOM05D001357 ORTHO05D001224 3.8e-06 56.2 86 50.0
BolC5t32580H Brassica oleracea HOM05D001357 ORTHO05D001224 3.8e-06 56.2 86 50.0
Prupe.8G248200 Prunus persica HOM05D001357 ORTHO05D001224 5.0e-06 55.8 173 29.5
Nitab4.5_0000295g0160 Nicotiana tabacum HOM05D001357 ORTHO05D001224 6.5e-06 55.5 129 30.2
BcaB01g01213 Brassica carinata HOM05D001357 ORTHO05D001224 8.5e-06 55.1 59 49.2
Rhsim13G0020900 Rhododendron simsii HOM05D001357 ORTHO05D001224 8.5e-06 55.1 112 33.9


User provided reference genes

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