Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaB03g13717 Brassica carinata HOM05D000003 ORTHO05D032039 1.1e-68 263.1 129 100.0
BcaB07g30860 Brassica carinata HOM05D000003 ORTHO05D000007 1.4e-21 106.7 125 48.8
C01p24010 Brassica napus HOM05D065086 ORTHO05D032039 1.1e-18 97.1 103 48.5
C05p28860 Brassica napus HOM05D005618 ORTHO05D007278 1.1e-18 97.1 114 45.6
BolC5t31605H Brassica oleracea HOM05D005618 ORTHO05D007278 1.1e-18 97.1 114 45.6
BcaB06g25353 Brassica carinata HOM05D000003 ORTHO05D000283 2.4e-18 95.9 76 59.2
BraA02t09306Z Brassica rapa HOM05D000003 ORTHO05D000007 4.1e-18 95.1 76 56.6
A09p40210 Brassica napus HOM05D000003 ORTHO05D000007 7.0e-18 94.4 76 59.2
BraA09t39519Z Brassica rapa HOM05D000003 ORTHO05D000007 7.0e-18 94.4 76 59.2
A10p04200 Brassica napus HOM05D000003 ORTHO05D000007 9.2e-18 94.0 76 57.9
BcaC08g43363 Brassica carinata HOM05D000003 ORTHO05D000007 1.2e-17 93.6 117 46.2
BolC6t35819H Brassica oleracea HOM05D000003 ORTHO05D000007 1.6e-17 93.2 98 50.0
BraA06t25893Z Brassica rapa HOM05D000003 ORTHO05D000007 1.6e-17 93.2 73 57.5
C05p26910 Brassica napus HOM05D000003 ORTHO05D000007 3.5e-17 92.0 76 53.9
BolC9t58036H Brassica oleracea HOM05D000003 ORTHO05D000007 4.6e-17 91.7 77 55.8
Thhalv10015367m.g Eutrema salsugineum HOM05D000003 ORTHO05D000007 4.6e-17 91.7 99 45.5
BraA01t03255Z Brassica rapa HOM05D000003 ORTHO05D000007 5.9e-17 91.3 128 39.8
BcaC01g05180 Brassica carinata HOM05D000003 ORTHO05D000007 1.0e-16 90.5 73 57.5
BcaB02g07776 Brassica carinata HOM05D000003 ORTHO05D000007 1.3e-16 90.1 73 57.5
BcaB06g25889 Brassica carinata HOM05D000003 ORTHO05D000007 1.3e-16 90.1 127 40.2
Thhalv10015497m.g Eutrema salsugineum HOM05D000003 ORTHO05D000007 1.3e-16 90.1 99 45.5
BcaC06g34146 Brassica carinata HOM05D000003 ORTHO05D000283 1.7e-16 89.7 116 41.4
A03p34860 Brassica napus HOM05D000003 ORTHO05D000007 1.7e-16 89.7 78 55.1
C04p45080 Brassica napus HOM05D028159 ORTHO05D028005 2.3e-16 89.4 73 57.5
BcaC05g25979 Brassica carinata HOM05D000003 ORTHO05D000007 3.0e-16 89.0 98 46.9
Thhalv10002285m.g Eutrema salsugineum HOM05D000003 ORTHO05D000007 3.9e-16 88.6 131 37.4
BcaB07g33765 Brassica carinata HOM05D000003 ORTHO05D000007 6.6e-16 87.8 73 54.8
Thhalv10000459m.g Eutrema salsugineum HOM05D000003 ORTHO05D000007 6.6e-16 87.8 73 53.4
Thhalv10017665m.g Eutrema salsugineum HOM05D000003 ORTHO05D000007 6.6e-16 87.8 76 53.9
Thhalv10022289m.g Eutrema salsugineum HOM05D000003 ORTHO05D000007 6.6e-16 87.8 76 53.9
BcaC08g43142 Brassica carinata HOM05D000003 ORTHO05D000283 8.6e-16 87.4 78 53.8
BcaB05g24536 Brassica carinata HOM05D000003 ORTHO05D000283 1.1e-15 87.0 72 55.6
BcaB01g03208 Brassica carinata HOM05D000003 ORTHO05D000007 1.5e-15 86.7 94 48.9
BolC9t55311H Brassica oleracea HOM05D000003 ORTHO05D000007 1.5e-15 86.7 77 51.9
BcaC09g50945 Brassica carinata HOM05D000003 ORTHO05D000007 1.9e-15 86.3 144 38.9
A03p52160 Brassica napus HOM05D000003 ORTHO05D000007 1.9e-15 86.3 73 54.8
BcaC08g45218 Brassica carinata HOM05D000003 ORTHO05D000007 3.3e-15 85.5 76 53.9
BraA09t40338Z Brassica rapa HOM05D000003 ORTHO05D000007 3.3e-15 85.5 73 53.4
C02p22170 Brassica napus HOM05D000003 ORTHO05D028000 4.3e-15 85.1 78 52.6
BolC5t32258H Brassica oleracea HOM05D000003 ORTHO05D000007 4.3e-15 85.1 73 54.8
BcaC02g12237 Brassica carinata HOM05D000003 ORTHO05D000007 5.6e-15 84.7 73 54.8
BcaC04g21713 Brassica carinata HOM05D000003 ORTHO05D000007 5.6e-15 84.7 73 53.4
BcaC01g00760 Brassica carinata HOM05D000003 ORTHO05D000007 9.5e-15 84.0 121 43.8
BolC9t55712H Brassica oleracea HOM05D000003 ORTHO05D000007 9.5e-15 84.0 73 53.4
AL96U10010 Arabidopsis lyrata HOM05D000003 ORTHO05D000004 1.2e-14 83.6 72 51.4
BraA05t20679Z Brassica rapa HOM05D000003 ORTHO05D000007 3.6e-14 82.0 97 41.2
Thhalv10009475m.g Eutrema salsugineum HOM05D000003 ORTHO05D000007 4.7e-14 81.6 74 51.4
Thhalv10017828m.g Eutrema salsugineum HOM05D000003 ORTHO05D000007 4.7e-14 81.6 72 52.8
A06p28910 Brassica napus HOM05D000003 ORTHO05D000007 6.2e-14 81.3 101 41.6
BcaB03g14792 Brassica carinata HOM05D000003 ORTHO05D000007 1.4e-13 80.1 68 54.4
CARHR110840 Cardamine hirsuta HOM05D000003 ORTHO05D000007 1.8e-13 79.7 93 41.9
C07p21920 Brassica napus HOM05D000003 ORTHO05D041027 2.3e-13 79.3 73 53.4
Thhalv10024027m.g Eutrema salsugineum HOM05D000003 ORTHO05D000007 4.0e-13 78.6 73 49.3
BcaB08g36128 Brassica carinata HOM05D000003 ORTHO05D000007 6.8e-13 77.8 128 35.9
BolC4t24667H Brassica oleracea HOM05D000003 ORTHO05D000007 6.8e-13 77.8 72 47.2
BolC7t42724H Brassica oleracea HOM05D000003 ORTHO05D041027 6.8e-13 77.8 73 52.1
BcaC07g37540 Brassica carinata HOM05D000003 ORTHO05D000007 1.2e-12 77.0 72 48.6
BcaNung01863 Brassica carinata HOM05D000003 ORTHO05D000007 1.2e-12 77.0 72 48.6
Thhalv10003309m.g Eutrema salsugineum HOM05D000003 ORTHO05D000007 1.5e-12 76.6 72 50.0
BcaC05g26008 Brassica carinata HOM05D000003 ORTHO05D000007 2.0e-12 76.3 68 50.0
BcaC04g20827 Brassica carinata HOM05D000003 ORTHO05D000007 2.6e-12 75.9 62 54.8
BolC9t56730H Brassica oleracea HOM05D000003 ORTHO05D000007 2.6e-12 75.9 62 54.8
C01p16120 Brassica napus HOM05D000003 ORTHO05D000007 3.4e-12 75.5 121 34.7
BraA04t18354Z Brassica rapa HOM05D000003 ORTHO05D000007 4.4e-12 75.1 62 53.2
BcaC03g13859 Brassica carinata HOM05D000003 ORTHO05D000007 5.8e-12 74.7 66 53.0
A03p33310 Brassica napus HOM05D000003 ORTHO05D000007 1.3e-11 73.6 68 47.1
BcaNung04603 Brassica carinata HOM05D000003 ORTHO05D000007 6.4e-11 71.2 59 57.6
BcaNung03157 Brassica carinata HOM05D000003 ORTHO05D000007 3.2e-10 68.9 61 50.8
BcaC02g09582 Brassica carinata HOM05D000003 ORTHO05D000007 7.0e-10 67.8 66 50.0
BcaB01g02113 Brassica carinata HOM05D000003 ORTHO05D000283 2.7e-09 65.9 64 51.6
BcaC04g23526 Brassica carinata HOM05D000003 ORTHO05D000007 2.7e-09 65.9 62 53.2
BcaB02g11235 Brassica carinata HOM05D000003 ORTHO05D000007 6.0e-09 64.7 91 41.8
BcaC05g27646 Brassica carinata HOM05D000003 ORTHO05D023912 1.0e-08 63.9 69 44.9
C05p36340 Brassica napus HOM05D000003 ORTHO05D023912 1.0e-08 63.9 69 44.9
BcaC07g39338 Brassica carinata HOM05D000003 ORTHO05D000007 2.3e-08 62.8 58 51.7
BcaB03g14903 Brassica carinata HOM05D039480 ORTHO05D000007 2.5e-07 59.3 41 63.4
BolC3t19489H Brassica oleracea HOM05D000112 ORTHO05D032741 4.3e-07 58.5 57 45.6
THA.LOC104803404 Tarenaya hassleriana HOM05D000003 ORTHO05D000007 4.3e-07 58.5 82 39.0
BcaC04g18816 Brassica carinata HOM05D000003 ORTHO05D032545 1.2e-06 57.0 64 43.8
C02p34560 Brassica napus HOM05D000003 ORTHO05D023912 2.1e-06 56.2 44 56.8
THA.LOC109116097 Tarenaya hassleriana HOM05D000003 ORTHO05D000007 8.1e-06 54.3 69 34.8


User provided reference genes

Program Settings