Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaB03g13641 Brassica carinata HOM05D007182 ORTHO05D008919 1.3e-99 366.3 181 100.0
A05p23400 Brassica napus HOM05D007182 ORTHO05D008919 6.3e-73 277.7 182 79.1
BraA05t21203Z Brassica rapa HOM05D007182 ORTHO05D008919 6.3e-73 277.7 182 79.1
Carub.0001s3387 Capsella rubella HOM05D007182 ORTHO05D008919 9.7e-66 253.8 183 72.7
Thhalv10004990m.g Eutrema salsugineum HOM05D007182 ORTHO05D008919 6.3e-65 251.1 181 72.4
CARHR034810 Cardamine hirsuta HOM05D007182 ORTHO05D008919 1.2e-63 246.9 182 69.2
AL1G51080 Arabidopsis lyrata HOM05D007182 ORTHO05D008919 3.5e-63 245.4 180 73.3
AT1G36940 Arabidopsis thaliana HOM05D007182 ORTHO05D008919 1.0e-62 243.8 186 71.0
Sp1g31070 Schrenkiella parvula HOM05D007182 ORTHO05D008919 1.4e-56 223.4 186 65.1
Aa31LG6G9060 Aethionema arabicum HOM05D007182 ORTHO05D008919 3.6e-36 155.6 173 55.5
THA.LOC104806807 Tarenaya hassleriana HOM05D007182 ORTHO05D008919 1.1e-29 134.0 177 46.9
Glyma.14G166200 Glycine max HOM05D007182 ORTHO05D008919 4.9e-25 118.6 183 45.4
THA.LOC104813133 Tarenaya hassleriana HOM05D007182 ORTHO05D008919 4.9e-25 118.6 176 45.5
FAN04G2762 Fragaria x ananassa HOM05D007182 ORTHO05D008919 2.4e-24 116.3 181 43.1
Glyma.13G084500 Glycine max HOM05D007182 ORTHO05D008919 2.4e-24 116.3 185 42.2
Hma1.2p1_0221F.1_g093130 Hydrangea macrophylla HOM05D007182 ORTHO05D008919 2.4e-24 116.3 178 45.5
Duzib041G0557 Durio zibethinus HOM05D007182 ORTHO05D008919 4.1e-24 115.5 180 43.9
Psat5g134040 Pisum sativum HOM05D007182 ORTHO05D008919 4.1e-24 115.5 191 41.9
Atru.chr13.1314 Acer truncatum HOM05D007182 ORTHO05D008919 1.2e-23 114.0 183 42.1
Atru.chr13.1358 Acer truncatum HOM05D007182 ORTHO05D008919 1.2e-23 114.0 183 42.1
Manes.02G158600 Manihot esculenta HOM05D007182 ORTHO05D008919 1.2e-23 114.0 184 42.9
Phvul.009G025900 Phaseolus vulgaris HOM05D007182 ORTHO05D008919 2.1e-23 113.2 190 37.4
Potri.002G089650 Populus trichocarpa HOM05D007182 ORTHO05D008919 2.1e-23 113.2 193 38.9
Sabra02G0070600 Salix brachista HOM05D007182 ORTHO05D008919 4.6e-23 112.1 180 43.3
TPR.G32946 Trifolium pratense HOM05D007182 ORTHO05D008919 4.6e-23 112.1 202 39.1
CiPaw.06G024500 Carya illinoinensis HOM05D007182 ORTHO05D008919 7.8e-23 111.3 195 40.0
FAN13G2785 Fragaria x ananassa HOM05D007182 ORTHO05D008919 7.8e-23 111.3 168 43.5
Phvul.008G168400 Phaseolus vulgaris HOM05D007182 ORTHO05D008919 1.0e-22 110.9 185 42.2
Duzib093G0280 Durio zibethinus HOM05D007182 ORTHO05D008919 1.3e-22 110.5 172 44.2
FAN08G1433 Fragaria x ananassa HOM05D007182 ORTHO05D008919 1.3e-22 110.5 168 42.9
TWI36G1401 Tripterygium wilfordii HOM05D007182 ORTHO05D008919 1.3e-22 110.5 181 40.3
Gohir.A06G040600 Gossypium hirsutum HOM05D007182 ORTHO05D008919 2.3e-22 109.8 191 42.4
Medtr3g073330 Medicago truncatula HOM05D007182 ORTHO05D008919 2.3e-22 109.8 195 39.0
Potri.005G171600 Populus trichocarpa HOM05D007182 ORTHO05D008919 2.3e-22 109.8 174 41.4
FvH4_5g38830 Fragaria vesca HOM05D007182 ORTHO05D008919 3.0e-22 109.4 168 42.9
FAN18G1758 Fragaria x ananassa HOM05D007182 ORTHO05D008919 3.0e-22 109.4 168 42.9
Gohir.D06G041600 Gossypium hirsutum HOM05D007182 ORTHO05D008919 3.9e-22 109.0 193 42.0
Rhsim06G0109300 Rhododendron simsii HOM05D007182 ORTHO05D008919 5.1e-22 108.6 170 42.9
Glyma.06G108400 Glycine max HOM05D007182 ORTHO05D008919 8.6e-22 107.8 192 37.5
Gorai.010G046800 Gossypium raimondii HOM05D007182 ORTHO05D008919 8.6e-22 107.8 193 42.0
Manes.18G072600 Manihot esculenta HOM05D007182 ORTHO05D008919 8.6e-22 107.8 192 42.2
Sabra05G0129100 Salix brachista HOM05D007182 ORTHO05D008919 8.6e-22 107.8 186 39.2
RcHm_v2.0_Chr7g0240831 Rosa chinensis HOM05D007182 ORTHO05D008919 1.5e-21 107.1 160 42.5
TWI12G0744 Tripterygium wilfordii HOM05D007182 ORTHO05D008919 1.5e-21 107.1 190 38.4
Duzib116G0693 Durio zibethinus HOM05D007182 ORTHO05D008919 2.5e-21 106.3 177 42.9
Glyma.04G253900 Glycine max HOM05D007182 ORTHO05D008919 2.5e-21 106.3 185 40.5
Lj1g0017374 Lotus japonicus HOM05D007182 ORTHO05D008919 3.3e-21 105.9 214 37.4
Sopen11g008530 Solanum pennellii HOM05D007182 ORTHO05D008919 9.5e-21 104.4 184 44.6
CiPaw.05G229300 Carya illinoinensis HOM05D007182 ORTHO05D008919 1.6e-20 103.6 187 39.6
COL.COLO4_21819 Corchorus olitorius HOM05D007182 ORTHO05D008919 3.6e-20 102.4 200 39.0
Thecc.08G116300 Theobroma cacao HOM05D007182 ORTHO05D008919 3.6e-20 102.4 180 39.4
TWI56G1442 Tripterygium wilfordii HOM05D007182 ORTHO05D008919 4.7e-20 102.1 191 39.3
VMungo1309G0514 Vigna mungo HOM05D007182 ORTHO05D008919 6.2e-20 101.7 156 39.7
Solyc11g013500.1 Solanum lycopersicum HOM05D007182 ORTHO05D008919 8.1e-20 101.3 184 43.5
FAN04G3126 Fragaria x ananassa HOM05D007182 ORTHO05D008919 4.0e-19 99.0 166 39.2
Lalb_Chr08g0241731 Lupinus albus HOM05D007182 ORTHO05D008919 5.2e-19 98.6 184 38.0
MELO3C022789.2 Cucumis melo HOM05D007182 ORTHO05D008919 6.8e-19 98.2 219 36.1
VMungo0647G1564 Vigna mungo HOM05D007182 ORTHO05D008919 8.9e-19 97.8 172 41.3
PGR042G1174 Punica granatum HOM05D007182 ORTHO05D008919 2.0e-18 96.7 196 32.7
PGSC0003DMG400027800 Solanum tuberosum HOM05D007182 ORTHO05D008919 2.0e-18 96.7 185 43.2
ClCG03G009070 Citrullus lanatus HOM05D007182 ORTHO05D008919 3.4e-18 95.9 212 36.8
Lalb_Chr10g0102011 Lupinus albus HOM05D007182 ORTHO05D008919 4.4e-18 95.5 192 35.4
Ciclev10002385m.g Citrus clementina HOM05D007182 ORTHO05D008919 7.5e-18 94.7 201 33.8
CsaV3_5G023550 Cucumis sativus L. HOM05D007182 ORTHO05D008919 9.9e-18 94.4 188 35.1
Gohir.D05G234100 Gossypium hirsutum HOM05D007182 ORTHO05D008919 1.3e-17 94.0 172 40.7
TAR197G0002 Trochodendron aralioides HOM05D007182 ORTHO05D008919 1.3e-17 94.0 160 39.4
Gohir.A05G231800 Gossypium hirsutum HOM05D007182 ORTHO05D008919 2.2e-17 93.2 175 40.6
TPR.G30417 Trifolium pratense HOM05D007182 ORTHO05D008919 6.4e-17 91.7 169 38.5
Cc00_g10670 Coffea canephora HOM05D007182 ORTHO05D008919 1.1e-16 90.9 178 36.5
Gorai.009G242300 Gossypium raimondii HOM05D007182 ORTHO05D008919 1.1e-16 90.9 173 39.3
Dinv26722 Davidia involucrata HOM05D007182 ORTHO05D008919 2.4e-16 89.7 127 47.2
Lalb_Chr11g0065671 Lupinus albus HOM05D007182 ORTHO05D008919 4.1e-16 89.0 181 36.5
Nitab4.5_0009801g0010 Nicotiana tabacum HOM05D007182 ORTHO05D008919 5.4e-16 88.6 161 41.0
Peaxi162Scf00476g00051 Petunia axillaris HOM05D007182 ORTHO05D008919 7.1e-16 88.2 173 41.6
Dinv27387 Davidia involucrata HOM05D007182 ORTHO05D008919 1.6e-15 87.0 91 51.6
DCAR_023125 Daucus carota HOM05D007182 ORTHO05D008919 2.7e-15 86.3 173 35.3
Nn5g27955 Nelumbo nucifera HOM05D007182 ORTHO05D008919 2.7e-15 86.3 164 34.8
EL10Ac1g00042 Beta vulgaris HOM05D007182 ORTHO05D008919 6.0e-15 85.1 254 30.3
Eucgr.F03740 Eucalyptus grandis HOM05D007182 ORTHO05D008919 1.3e-14 84.0 174 36.2
Sed0021526 Sechium edule HOM05D007182 ORTHO05D008919 1.3e-14 84.0 222 34.7
Sc23g0000930 Simmondsia chinensis HOM05D007182 ORTHO05D008919 1.3e-14 84.0 229 31.4
Migut.N03323 Erythranthe guttata HOM05D007182 ORTHO05D008919 8.6e-14 81.3 163 36.8
TAR127G0001 Trochodendron aralioides HOM05D007182 ORTHO05D008919 4.3e-13 79.0 161 36.0
Prupe.1G506300 Prunus persica HOM05D007182 ORTHO05D008919 1.2e-12 77.4 202 30.2
TAR628G0731 Trochodendron aralioides HOM05D007182 ORTHO05D008919 1.6e-12 77.0 131 42.0
Medtr5g060450 Medicago truncatula HOM05D007182 ORTHO05D008919 2.1e-12 76.6 170 34.1
Lj1g0021904 Lotus japonicus HOM05D007182 ORTHO05D008919 2.8e-12 76.3 123 44.7
Nn1g08539 Nelumbo nucifera HOM05D007182 ORTHO05D008919 8.1e-12 74.7 133 39.1
Oeu043797.1 Olea europaea HOM05D000316 ORTHO05D008919 8.1e-12 74.7 179 31.8
Oeu043798.1 Olea europaea HOM05D000316 ORTHO05D008919 8.1e-12 74.7 179 31.8
Oeu017862.1 Olea europaea HOM05D007182 ORTHO05D008919 1.4e-11 73.9 179 34.6
DCAR_014791 Daucus carota HOM05D007182 ORTHO05D008919 2.0e-10 70.1 185 30.3
SGA_v2.0_scaffold28G12033 Striga asiatica HOM05D007182 ORTHO05D008919 3.4e-10 69.3 171 32.2
Nitab4.5_0000051g0140 Nicotiana tabacum HOM05D007182 ORTHO05D008919 4.4e-10 68.9 122 39.3
SGA_v2.0_scaffold118G32440 Striga asiatica HOM05D007182 ORTHO05D008919 7.6e-10 68.2 158 31.6
ECA247G3744 Erigeron canadensis HOM05D007182 ORTHO05D008919 1.7e-09 67.0 179 31.8
Lsat_1_v5_gn_1_25160 Lactuca sativa HOM05D007182 ORTHO05D008919 3.8e-09 65.9 206 29.6
Lsat_1_v5_gn_4_133360 Lactuca sativa HOM05D007182 ORTHO05D008919 3.8e-09 65.9 153 36.6
AUR62004689 Chenopodium quinoa HOM05D007182 ORTHO05D008919 3.2e-08 62.8 154 34.4
MSTRG.1489 Avicennia marina HOM05D007182 ORTHO05D008919 9.3e-08 61.2 153 27.5
DCAR_014280 Daucus carota HOM05D007182 ORTHO05D008919 9.3e-08 61.2 169 33.1
Ah.05g172700 Amaranthus hybridus HOM05D007182 ORTHO05D008919 1.6e-07 60.5 235 25.5
Lj7P307T15 Lonicera japonica HOM05D007182 ORTHO05D008919 3.5e-07 59.3 76 44.7
MBI03_g11135_MAGBIO Magnolia biondii HOM05D007182 ORTHO05D008919 8.7e-06 54.7 129 32.6
SalBow7G0102 Salvia bowleyana HOM05D007182 ORTHO05D008919 8.7e-06 54.7 145 29.0
SalBow7G3005 Salvia bowleyana HOM05D007182 ORTHO05D008919 8.7e-06 54.7 145 29.0


User provided reference genes

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