Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaB03g13480 Brassica carinata HOM05D004446 ORTHO05D005346 1.6e-79 299.3 144 100.0
BcaC07g36901 Brassica carinata HOM05D004446 ORTHO05D005346 3.6e-79 298.1 144 99.3
A08p36850 Brassica napus HOM05D004446 ORTHO05D005346 3.6e-79 298.1 144 99.3
A09p67770 Brassica napus HOM05D004446 ORTHO05D005346 3.6e-79 298.1 144 99.3
A10p03060 Brassica napus HOM05D004446 ORTHO05D005346 3.6e-79 298.1 144 99.3
C05p02820 Brassica napus HOM05D004446 ORTHO05D005346 3.6e-79 298.1 144 99.3
BolC5t29065H Brassica oleracea HOM05D004446 ORTHO05D005346 3.6e-79 298.1 144 99.3
BolC8t46930H Brassica oleracea HOM05D004446 ORTHO05D005346 3.6e-79 298.1 144 99.3
BraA08t35586Z Brassica rapa HOM05D004446 ORTHO05D005346 3.6e-79 298.1 144 99.3
BraA09t42108Z Brassica rapa HOM05D004446 ORTHO05D005346 3.6e-79 298.1 144 99.3
BraA10t42579Z Brassica rapa HOM05D004446 ORTHO05D005346 3.6e-79 298.1 144 99.3
Thhalv10017386m.g Eutrema salsugineum HOM05D004446 ORTHO05D005346 3.6e-79 298.1 144 99.3
Sp1g03460 Schrenkiella parvula HOM05D004446 ORTHO05D005346 3.6e-79 298.1 144 99.3
AL4G28840 Arabidopsis lyrata HOM05D004446 ORTHO05D005346 1.0e-78 296.6 144 98.6
C08p01220 Brassica napus HOM05D004446 ORTHO05D005346 4.0e-78 294.7 144 98.6
Thhalv10009042m.g Eutrema salsugineum HOM05D004446 ORTHO05D005346 5.2e-78 294.3 144 97.9
CARHR127230 Cardamine hirsuta HOM05D004446 ORTHO05D005346 6.7e-78 293.9 144 97.2
AL1G14310 Arabidopsis lyrata HOM05D004446 ORTHO05D005346 1.2e-77 293.1 144 97.2
Carub.0004s1468 Capsella rubella HOM05D004446 ORTHO05D005346 1.2e-77 293.1 144 97.9
AT2G33220 Arabidopsis thaliana HOM05D004446 ORTHO05D005346 2.6e-77 292.0 142 98.6
CARHR003980 Cardamine hirsuta HOM05D004446 ORTHO05D005346 2.6e-77 292.0 144 96.5
Sp4g15520 Schrenkiella parvula HOM05D004446 ORTHO05D005346 2.6e-77 292.0 144 96.5
AT1G04630 Arabidopsis thaliana HOM05D004446 ORTHO05D005346 9.7e-77 290.0 144 95.8
Carub.0001s0386 Capsella rubella HOM05D004446 ORTHO05D005346 9.7e-77 290.0 144 95.8
Aa31LG5G4110 Aethionema arabicum HOM05D004446 ORTHO05D005346 2.8e-76 288.5 144 94.4
Aa31LG1G20240 Aethionema arabicum HOM05D004446 ORTHO05D005346 1.1e-75 286.6 144 93.8
CANSAT78G0709 Cannabis sativa HOM05D004446 ORTHO05D005346 5.0e-73 277.7 144 91.0
Medtr1g046380 Medicago truncatula HOM05D004446 ORTHO05D005346 5.0e-73 277.7 144 91.0
Atru.chr4.1819 Acer truncatum HOM05D004446 ORTHO05D005346 8.5e-73 276.9 144 90.3
Psat6g109720 Pisum sativum HOM05D004446 ORTHO05D005346 1.5e-72 276.2 144 90.3
PGR044G1212 Punica granatum HOM05D004446 ORTHO05D005346 1.9e-72 275.8 144 90.3
Eucgr.H02865 Eucalyptus grandis HOM05D004446 ORTHO05D005346 3.2e-72 275.0 144 89.6
Cpa.g.sc59.66 Carica papaya HOM05D004446 ORTHO05D005346 5.5e-72 274.2 144 89.6
Gohir.D10G146200 Gossypium hirsutum HOM05D004446 ORTHO05D005346 5.5e-72 274.2 144 88.9
TPR.G23640 Trifolium pratense HOM05D004446 ORTHO05D005346 5.5e-72 274.2 144 88.9
Gohir.A10G120100 Gossypium hirsutum HOM05D004446 ORTHO05D005346 7.2e-72 273.9 144 89.6
Gohir.D10G146300 Gossypium hirsutum HOM05D004446 ORTHO05D005346 7.2e-72 273.9 144 89.6
Gorai.011G163400 Gossypium raimondii HOM05D004446 ORTHO05D005346 7.2e-72 273.9 144 89.6
Manes.03G155100 Manihot esculenta HOM05D004446 ORTHO05D005346 9.4e-72 273.5 144 88.9
Gorai.011G163300 Gossypium raimondii HOM05D004446 ORTHO05D005346 1.6e-71 272.7 144 88.2
THA.LOC104816014 Tarenaya hassleriana HOM05D004446 ORTHO05D005346 1.6e-71 272.7 144 89.6
Thecc.04G215500 Theobroma cacao HOM05D004446 ORTHO05D005346 2.1e-71 272.3 144 88.9
ClCG06G007390 Citrullus lanatus HOM05D004446 ORTHO05D005346 2.7e-71 271.9 144 88.2
CsaV3_2G012290 Cucumis sativus L. HOM05D004446 ORTHO05D005346 2.7e-71 271.9 144 88.2
THA.LOC104826105 Tarenaya hassleriana HOM05D004446 ORTHO05D005346 2.7e-71 271.9 144 89.6
COL.COLO4_05729 Corchorus olitorius HOM05D004446 ORTHO05D005346 3.6e-71 271.6 144 88.2
Gohir.A10G120200 Gossypium hirsutum HOM05D004446 ORTHO05D005346 3.6e-71 271.6 144 87.5
Ciclev10006172m.g Citrus clementina HOM05D004446 ORTHO05D005346 4.7e-71 271.2 144 88.9
Duzib212G0284 Durio zibethinus HOM05D004446 ORTHO05D005346 6.1e-71 270.8 144 88.2
RcHm_v2.0_Chr4g0396561 Rosa chinensis HOM05D004446 ORTHO05D005346 6.1e-71 270.8 144 88.2
CiPaw.01G206200 Carya illinoinensis HOM05D004446 ORTHO05D005346 8.0e-71 270.4 144 87.5
CiPaw.02G127900 Carya illinoinensis HOM05D004446 ORTHO05D005346 8.0e-71 270.4 144 86.8
Manes.15G048500 Manihot esculenta HOM05D004446 ORTHO05D005346 1.0e-70 270.0 144 88.2
arahy.Tifrunner.gnm1.ann1.VC13RQ Arachis hypogaea HOM05D004446 ORTHO05D005346 1.4e-70 269.6 144 86.8
MELO3C023063.2 Cucumis melo HOM05D004446 ORTHO05D005346 1.4e-70 269.6 144 87.5
Sed0017441 Sechium edule HOM05D004446 ORTHO05D005346 1.4e-70 269.6 144 86.8
Glyma.20G079400 Glycine max HOM05D004446 ORTHO05D005346 1.8e-70 269.2 144 87.5
Lj6g0002383 Lotus japonicus HOM05D004446 ORTHO05D005346 1.8e-70 269.2 144 86.8
MD13G1228700 Malus domestica HOM05D004446 ORTHO05D005346 5.2e-70 267.7 144 86.1
FvH4_4g05410 Fragaria vesca HOM05D004446 ORTHO05D005346 6.8e-70 267.3 144 86.8
FAN07G2016 Fragaria x ananassa HOM05D004446 ORTHO05D005346 6.8e-70 267.3 144 86.8
FAN12G2493 Fragaria x ananassa HOM05D004446 ORTHO05D005346 6.8e-70 267.3 144 86.8
FAN12G4338 Fragaria x ananassa HOM05D004446 ORTHO05D005346 6.8e-70 267.3 144 86.8
MD16G1234000 Malus domestica HOM05D004446 ORTHO05D005346 6.8e-70 267.3 144 86.1
Potri.001G054500 Populus trichocarpa HOM05D004446 ORTHO05D005346 6.8e-70 267.3 144 86.8
Glyma.10G128100 Glycine max HOM05D004446 ORTHO05D005346 1.2e-69 266.5 144 86.8
Lalb_Chr01g0011251 Lupinus albus HOM05D004446 ORTHO05D005346 2.0e-69 265.8 144 84.0
Potri.003G173800 Populus trichocarpa HOM05D004446 ORTHO05D005346 2.0e-69 265.8 144 85.4
Prupe.1G056200 Prunus persica HOM05D004446 ORTHO05D005346 2.0e-69 265.8 144 86.1
MSTRG.24643 Avicennia marina HOM05D004446 ORTHO05D005346 2.6e-69 265.4 144 86.1
Phvul.007G238600 Phaseolus vulgaris HOM05D004446 ORTHO05D005346 3.4e-69 265.0 144 84.7
Lalb_Chr03g0036811 Lupinus albus HOM05D004446 ORTHO05D005346 5.7e-69 264.2 144 84.7
arahy.Tifrunner.gnm1.ann1.Q5T5LU Arachis hypogaea HOM05D004446 ORTHO05D005346 7.5e-69 263.8 142 85.9
Ca_11789_v3 Cicer arietinum L. HOM05D004446 ORTHO05D005346 7.5e-69 263.8 144 84.7
Nitab4.5_0000451g0180 Nicotiana tabacum HOM05D004446 ORTHO05D005346 9.8e-69 263.5 144 86.1
Nitab4.5_0018759g0010 Nicotiana tabacum HOM05D004446 ORTHO05D005346 9.8e-69 263.5 144 86.1
SalBow2G1310 Salvia bowleyana HOM05D004446 ORTHO05D005346 9.8e-69 263.5 144 85.4
vmacro00521 Vaccinium macrocarpon HOM05D004446 ORTHO05D005346 9.8e-69 263.5 144 85.4
Peaxi162Scf00047g01619 Petunia axillaris HOM05D004446 ORTHO05D005346 1.3e-68 263.1 144 86.1
Solyc09g091170.4 Solanum lycopersicum HOM05D004446 ORTHO05D005346 1.3e-68 263.1 144 86.1
Sopen09g034140 Solanum pennellii HOM05D004446 ORTHO05D005346 1.3e-68 263.1 144 86.1
QL06p022604 Quercus lobata HOM05D004446 ORTHO05D005346 1.7e-68 262.7 143 84.6
Hund19262 Selenicereus undatus HOM05D004446 ORTHO05D005346 1.7e-68 262.7 144 84.7
SGA_v2.0_scaffold155G37240 Striga asiatica HOM05D004446 ORTHO05D005346 1.7e-68 262.7 144 85.4
AUR62035332 Chenopodium quinoa HOM05D004446 ORTHO05D005346 2.2e-68 262.3 144 86.1
Cc00_g09360 Coffea canephora HOM05D004446 ORTHO05D005346 2.2e-68 262.3 144 85.4
PGSC0003DMG400011587 Solanum tuberosum HOM05D004446 ORTHO05D005346 2.2e-68 262.3 144 86.1
TWI73G1246 Tripterygium wilfordii HOM05D004446 ORTHO05D005346 2.2e-68 262.3 144 84.7
CSS0043422 Camellia sinensis var. sinensis HOM05D004446 ORTHO05D005346 2.8e-68 261.9 144 84.7
CSS0044163 Camellia sinensis var. sinensis HOM05D004446 ORTHO05D005346 2.8e-68 261.9 144 84.7
VMungo0720G0669 Vigna mungo HOM05D004446 ORTHO05D005346 2.8e-68 261.9 144 84.7
CDE04G3627 Ceratophyllum demersum HOM05D004446 ORTHO05D005346 3.7e-68 261.5 144 85.4
Nn2g14612 Nelumbo nucifera HOM05D004446 ORTHO05D005346 3.7e-68 261.5 144 85.4
Lsat_1_v5_gn_2_41880 Lactuca sativa HOM05D004446 ORTHO05D005346 4.8e-68 261.2 143 84.6
EL10Ac3g06748 Beta vulgaris HOM05D004446 ORTHO05D005346 6.3e-68 260.8 144 85.4
HanXRQChr14g0434271 Helianthus annuus HOM05D004446 ORTHO05D005346 8.3e-68 260.4 144 84.0
Aqoxy3G02680 Aquilegia oxysepala HOM05D004446 ORTHO05D005346 1.1e-67 260.0 144 86.1
DCAR_027363 Daucus carota HOM05D004446 ORTHO05D005346 1.1e-67 260.0 144 84.0
HanXRQChr06g0183261 Helianthus annuus HOM05D004446 ORTHO05D005346 1.1e-67 260.0 144 84.0
TWI09G0335 Tripterygium wilfordii HOM05D004446 ORTHO05D005346 1.8e-67 259.2 144 84.0
ATR0736G077 Amborella trichopoda HOM05D004446 ORTHO05D005346 5.4e-67 257.7 144 83.3
TAR365G0553 Trochodendron aralioides HOM05D004446 ORTHO05D005346 5.4e-67 257.7 144 84.7
Sc19g0005800 Simmondsia chinensis HOM05D004446 ORTHO05D005346 7.0e-67 257.3 144 84.7
Nn5g27558 Nelumbo nucifera HOM05D004446 ORTHO05D005346 9.1e-67 256.9 144 83.3
Actinidia35938 Actinidia chinensis HOM05D004446 ORTHO05D005346 1.2e-66 256.5 144 81.2
TAR362G0142 Trochodendron aralioides HOM05D004446 ORTHO05D005346 1.2e-66 256.5 144 83.3
ECA238G1521 Erigeron canadensis HOM05D004446 ORTHO05D005346 1.6e-66 256.1 144 82.6
Rhsim09G0047000 Rhododendron simsii HOM05D004446 ORTHO05D005346 1.6e-66 256.1 151 80.8
RhsimUnG0181300 Rhododendron simsii HOM05D004446 ORTHO05D005346 1.6e-66 256.1 151 80.8
TAR633G2153 Trochodendron aralioides HOM05D004446 ORTHO05D005346 1.6e-66 256.1 142 85.2
HPP92_008960 Vanilla planifolia HOM05D004446 ORTHO05D005346 1.6e-66 256.1 144 82.6
Zm00001eb008370 Zea mays HOM05D004446 ORTHO05D005346 2.0e-66 255.8 144 82.6
Lsat_1_v5_gn_2_41141 Lactuca sativa HOM05D004446 ORTHO05D005346 7.7e-66 253.8 141 83.7
PSO782G0825 Papaver somniferum HOM05D004446 ORTHO05D005346 2.9e-65 251.9 144 81.9
Zm00001eb401250 Zea mays HOM05D004446 ORTHO05D005346 1.5e-64 249.6 144 80.6
PSO063G0015 Papaver somniferum HOM05D004446 ORTHO05D005346 2.5e-64 248.8 144 81.2
BcaC07g42166 Brassica carinata HOM05D004446 ORTHO05D005346 3.3e-64 248.4 144 86.8
vmacro22557 Vaccinium macrocarpon HOM05D004446 ORTHO05D005346 5.5e-64 247.7 154 77.9
Hma1.2p1_2329F.1_g320020 Hydrangea macrophylla HOM05D004446 ORTHO05D005346 7.2e-64 247.3 175 70.3
AUR62035909 Chenopodium quinoa HOM05D004446 ORTHO05D005346 1.0e-62 243.4 135 85.9
Dinv38297 Davidia involucrata HOM05D004446 ORTHO05D005346 1.0e-62 243.4 135 85.2
Migut.G00605 Erythranthe guttata HOM05D004446 ORTHO05D005346 3.0e-62 241.9 144 81.2
Os03g0192400 Oryza sativa ssp. japonica HOM05D004446 ORTHO05D005346 1.2e-61 240.0 139 81.3
BolC3t14561H Brassica oleracea HOM05D004446 ORTHO05D005346 5.9e-58 227.6 140 82.9
BolC8t52743H Brassica oleracea HOM05D004446 ORTHO05D005346 3.8e-57 224.9 117 95.7
SEGI_11387 Sequoiadendron giganteum HOM05D004446 ORTHO05D005346 2.1e-55 219.2 144 69.4
Sabra03G0127300 Salix brachista HOM05D004446 ORTHO05D005346 1.0e-54 216.9 260 47.3
Actinidia25089 Actinidia chinensis HOM05D004446 ORTHO05D005346 1.3e-52 209.9 177 59.9
Ah.13g075110 Amaranthus hybridus HOM05D004446 ORTHO05D005346 7.0e-51 204.1 144 69.4
Sabra01G0039000 Salix brachista HOM05D004446 ORTHO05D005346 4.6e-50 201.4 308 40.9
Pp3c5_4240 Physcomitrium patens HOM05D004446 ORTHO05D005346 6.0e-50 201.1 141 68.1
AagrBONN_evm.TU.Sc2ySwM_344.5082 Anthoceros agrestis HOM05D004446 ORTHO05D005346 8.6e-49 197.2 144 64.6
Pp3c16_2570 Physcomitrium patens HOM05D004446 ORTHO05D005346 1.1e-48 196.8 141 68.1
unitig_748.g8289 Utricularia gibba HOM05D002765 ORTHO05D003083 1.1e-46 190.3 142 67.6
Mapoly0001s0090 Marchantia polymorpha HOM05D004446 ORTHO05D005346 3.1e-46 188.7 142 63.4
CBR_g9031 Chara braunii HOM05D004446 ORTHO05D005346 9.8e-45 183.7 138 63.0
C08p52100 Brassica napus HOM05D004446 ORTHO05D005346 7.0e-43 177.6 97 88.7
Dinv27149 Davidia involucrata HOM05D004446 ORTHO05D005346 3.4e-37 158.7 82 89.0
GSVIVG01028486001 Vitis vinifera HOM05D004446 ORTHO05D005346 5.8e-37 157.9 84 85.7
A03p18650 Brassica napus HOM05D004446 ORTHO05D005346 1.3e-36 156.8 73 100.0
BraA03t11124Z Brassica rapa HOM05D004446 ORTHO05D005346 1.3e-36 156.8 73 100.0
MCO16G128 Micromonas commoda HOM05D004446 ORTHO05D005346 5.4e-35 151.4 142 53.5
Haze_11535 Corylus avellana HOM05D004446 ORTHO05D005346 2.7e-34 149.1 88 78.4
Oeu008823.1 Olea europaea HOM05D004446 ORTHO05D005346 8.6e-33 144.1 72 91.7
RhsimUnG0181500 Rhododendron simsii HOM05D004446 ORTHO05D005346 3.3e-32 142.1 75 84.0
CAN.G1588.2 Capsicum annuum HOM05D004446 ORTHO05D005346 9.5e-32 140.6 75 85.3
BcaC01g05851 Brassica carinata HOM05D004446 ORTHO05D005346 8.1e-31 137.5 77 85.7
SMO364G0175 Selaginella moellendorffii HOM05D004446 ORTHO05D005346 2.4e-27 125.9 143 45.5
Cre16.g664600 Chlamydomonas reinhardtii HOM05D004446 ORTHO05D005346 7.8e-26 120.9 133 44.4
Zm00001eb305890 Zea mays HOM05D004446 ORTHO05D005346 6.6e-25 117.9 133 50.4
MBI10_g44933_MAGBIO Magnolia biondii HOM05D004446 ORTHO05D005346 2.1e-23 112.8 63 84.1
Oeu008826.1 Olea europaea HOM05D004446 ORTHO05D005346 6.2e-23 111.3 64 81.2
MBI10_g35300_MAGBIO Magnolia biondii HOM05D004446 ORTHO05D005346 8.1e-23 110.9 153 46.4
Cc05_g03600 Coffea canephora HOM05D004446 ORTHO05D005346 5.2e-22 108.2 74 71.6
C03p21790 Brassica napus HOM05D004446 ORTHO05D005346 1.5e-16 90.1 46 93.5
SHI08306 Sapria himalayana HOM05D004446 ORTHO05D005346 8.1e-15 84.3 89 48.3
SHI22881 Sapria himalayana HOM05D004446 ORTHO05D005346 1.1e-11 73.9 54 66.7
PRCOL_00006069 Prasinoderma coloniale HOM05D004446 ORTHO05D005346 2.5e-08 62.8 99 34.3
CSS0009466 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D000002 1.3e-07 60.5 30 83.3
unitig_32.g10861 Utricularia gibba HOM05D004446 ORTHO05D005346 8.1e-07 57.8 95 43.2


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