Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaB03g13356 Brassica carinata HOM05D000452 ORTHO05D005748 4.1e-265 917.5 479 100.0
BcaC05g24718 Brassica carinata HOM05D000452 ORTHO05D005748 5.3e-228 794.3 495 83.8
BolC5t29365H Brassica oleracea HOM05D000452 ORTHO05D005748 5.3e-228 794.3 495 83.8
Thhalv10007441m.g Eutrema salsugineum HOM05D000452 ORTHO05D005748 2.2e-221 772.3 503 83.7
AL1G18360 Arabidopsis lyrata HOM05D000452 ORTHO05D005748 1.2e-216 756.5 503 81.3
A08p35370 Brassica napus HOM05D000452 ORTHO05D005748 2.7e-216 755.4 500 81.6
BraA06t23716Z Brassica rapa HOM05D000452 ORTHO05D005748 1.4e-215 753.1 499 80.0
BraA08t35443Z Brassica rapa HOM05D000452 ORTHO05D005748 7.4e-214 747.3 500 81.8
CARHR007800 Cardamine hirsuta HOM05D000452 ORTHO05D005748 8.2e-213 743.8 500 81.4
AT1G08030 Arabidopsis thaliana HOM05D000452 ORTHO05D005748 1.4e-212 743.0 503 78.1
BcaB02g06693 Brassica carinata HOM05D000452 ORTHO05D005748 4.5e-211 738.0 499 80.2
BolC8t47149H Brassica oleracea HOM05D000452 ORTHO05D005748 1.7e-210 736.1 502 81.1
C08p03470 Brassica napus HOM05D000452 ORTHO05D005748 3.8e-210 734.9 502 81.1
Sp1g06650 Schrenkiella parvula HOM05D000452 ORTHO05D005748 1.8e-207 726.1 499 79.4
Carub.0001s0737 Capsella rubella HOM05D000452 ORTHO05D005748 1.7e-205 719.5 503 75.1
A06p05090 Brassica napus HOM05D000452 ORTHO05D005748 1.4e-204 716.5 446 83.9
C05p06050 Brassica napus HOM05D000452 ORTHO05D005748 1.1e-201 706.8 446 83.2
THA.LOC104826371 Tarenaya hassleriana HOM05D000452 ORTHO05D005748 2.4e-180 636.0 500 69.0
THA.LOC104800598 Tarenaya hassleriana HOM05D000452 ORTHO05D005748 3.4e-174 615.5 499 67.3
Aa31sc122G10 Aethionema arabicum HOM05D000452 ORTHO05D005748 1.4e-172 610.1 466 71.7
Manes.04G019700 Manihot esculenta HOM05D000452 ORTHO05D005748 3.1e-143 512.7 507 55.2
CiPaw.13G114400 Carya illinoinensis HOM05D000452 ORTHO05D005748 4.9e-141 505.4 513 55.4
Potri.009G011400 Populus trichocarpa HOM05D000452 ORTHO05D005748 1.4e-140 503.8 501 54.7
TWI31G0927 Tripterygium wilfordii HOM05D000452 ORTHO05D005748 2.4e-140 503.1 493 56.4
MD03G1119900 Malus domestica HOM05D000452 ORTHO05D005748 6.0e-139 498.4 418 61.5
MD11G1137500 Malus domestica HOM05D000452 ORTHO05D005748 2.3e-138 496.5 484 56.0
Haze_23811 Corylus avellana HOM05D000452 ORTHO05D005748 3.0e-138 496.1 499 54.3
Thecc.09G342400 Theobroma cacao HOM05D000452 ORTHO05D005748 3.0e-138 496.1 494 55.5
FAN21G3667 Fragaria x ananassa HOM05D000452 ORTHO05D005748 6.6e-138 495.0 500 55.2
FvH4_3g31960 Fragaria vesca HOM05D000452 ORTHO05D005748 8.7e-138 494.6 500 55.2
FAN11G0834 Fragaria x ananassa HOM05D000452 ORTHO05D005748 8.7e-138 494.6 500 55.2
Lj3g0027876 Lotus japonicus HOM05D000452 ORTHO05D005748 8.7e-138 494.6 489 55.6
CANSAT54G2994 Cannabis sativa HOM05D000452 ORTHO05D005748 1.5e-137 493.8 500 56.0
Nitab4.5_0005742g0010 Nicotiana tabacum HOM05D000452 ORTHO05D005748 1.5e-137 493.8 500 53.2
Prupe.6G103100 Prunus persica HOM05D000452 ORTHO05D005748 3.3e-137 492.7 486 54.9
GSVIVG01025200001 Vitis vinifera HOM05D000452 ORTHO05D005748 3.3e-137 492.7 494 53.8
arahy.Tifrunner.gnm1.ann1.I1PATR Arachis hypogaea HOM05D000452 ORTHO05D005748 4.3e-137 492.3 491 55.0
RcHm_v2.0_Chr5g0058721 Rosa chinensis HOM05D000452 ORTHO05D005748 4.3e-137 492.3 504 54.2
Peaxi162Scf00270g00311 Petunia axillaris HOM05D000452 ORTHO05D005748 5.6e-137 491.9 500 52.4
Gorai.003G142700 Gossypium raimondii HOM05D000452 ORTHO05D005748 1.6e-136 490.3 501 53.7
TWI79G0017 Tripterygium wilfordii HOM05D000452 ORTHO05D005748 2.8e-136 489.6 486 55.3
COL.COLO4_18319 Corchorus olitorius HOM05D000452 ORTHO05D002419 3.6e-136 489.2 497 53.7
Gohir.A03G032800 Gossypium hirsutum HOM05D000452 ORTHO05D005748 1.8e-135 486.9 501 53.7
arahy.Tifrunner.gnm1.ann1.S7ZFT4 Arachis hypogaea HOM05D000452 ORTHO05D005748 2.4e-135 486.5 491 54.6
MELO3C004897.2 Cucumis melo HOM05D000452 ORTHO05D005748 4.0e-135 485.7 499 54.5
FAN25G3410 Fragaria x ananassa HOM05D000452 ORTHO05D005748 4.0e-135 485.7 500 54.6
Glyma.11G145300 Glycine max HOM05D000452 ORTHO05D005748 5.3e-135 485.3 503 54.5
Gohir.D03G135600 Gossypium hirsutum HOM05D000452 ORTHO05D005748 9.0e-135 484.6 502 53.2
Nitab4.5_0000602g0100 Nicotiana tabacum HOM05D000452 ORTHO05D005748 9.0e-135 484.6 500 52.6
ClCG01G013590 Citrullus lanatus HOM05D000452 ORTHO05D005748 1.2e-134 484.2 494 54.5
Sed0009159 Sechium edule HOM05D000452 ORTHO05D005748 1.5e-134 483.8 499 53.7
Hma1.2p1_0307F.1_g119780 Hydrangea macrophylla HOM05D000452 ORTHO05D005748 2.0e-134 483.4 495 52.9
arahy.Tifrunner.gnm1.ann1.AXM315 Arachis hypogaea HOM05D000452 ORTHO05D005748 2.6e-134 483.0 491 54.2
Lalb_Chr01g0004351 Lupinus albus HOM05D000452 ORTHO05D005748 4.4e-134 482.3 497 53.5
Cfa011305 Carpinus fangiana HOM05D000452 ORTHO05D005748 5.8e-134 481.9 445 57.8
Phvul.011G080300 Phaseolus vulgaris HOM05D000452 ORTHO05D005748 2.9e-133 479.6 502 54.0
Migut.D02233 Erythranthe guttata HOM05D000452 ORTHO05D005748 3.8e-133 479.2 498 53.8
PSO339G2396 Papaver somniferum HOM05D000452 ORTHO05D005748 3.8e-133 479.2 510 51.8
Actinidia03722 Actinidia chinensis HOM05D000452 ORTHO05D005748 8.4e-133 478.0 479 53.9
MSTRG.21118 Avicennia marina HOM05D000452 ORTHO05D005748 8.4e-133 478.0 477 55.1
Medtr4g058890 Medicago truncatula HOM05D000452 ORTHO05D005748 8.4e-133 478.0 502 53.8
VMungo1127G0723 Vigna mungo HOM05D000452 ORTHO05D005748 1.4e-132 477.2 503 54.3
CSS0006947 Camellia sinensis var. sinensis HOM05D000452 ORTHO05D005748 5.4e-132 475.3 489 53.2
CsaV3_1G013960 Cucumis sativus L. HOM05D000452 ORTHO05D005748 9.3e-132 474.6 488 53.7
TAR636G2205 Trochodendron aralioides HOM05D000452 ORTHO05D005748 2.1e-131 473.4 499 53.7
HanXRQChr01g0019321 Helianthus annuus HOM05D000452 ORTHO05D005748 2.7e-131 473.0 430 57.4
Lalb_Chr19g0137171 Lupinus albus HOM05D000452 ORTHO05D005748 1.3e-130 470.7 494 53.0
PGSC0003DMG400008083 Solanum tuberosum HOM05D000452 ORTHO05D005748 5.1e-130 468.8 501 50.9
Solyc11g069520.2 Solanum lycopersicum HOM05D000452 ORTHO05D005748 6.6e-130 468.4 497 52.1
Rhsim13G0095000 Rhododendron simsii HOM05D000452 ORTHO05D005748 1.5e-129 467.2 498 52.2
Sopen11g028230 Solanum pennellii HOM05D000452 ORTHO05D005748 1.5e-129 467.2 497 52.1
Ciclev10028288m.g Citrus clementina HOM05D000452 ORTHO05D005748 4.3e-129 465.7 493 52.3
arahy.Tifrunner.gnm1.ann1.WEDN33 Arachis hypogaea HOM05D000452 ORTHO05D005748 9.6e-129 464.5 506 52.6
Cc01_g11000 Coffea canephora HOM05D000452 ORTHO05D005748 1.3e-128 464.2 509 50.5
vmacro03204 Vaccinium macrocarpon HOM05D000452 ORTHO05D005748 6.2e-128 461.8 484 52.7
QL01p021907 Quercus lobata HOM05D000452 ORTHO05D005748 6.9e-127 458.4 595 45.5
TAR633G0246 Trochodendron aralioides HOM05D000452 ORTHO05D005748 1.2e-126 457.6 494 53.8
Oeu030194.1 Olea europaea HOM05D000452 ORTHO05D005748 2.0e-126 456.8 505 50.1
CsaV3_1G013970 Cucumis sativus L. HOM05D000452 ORTHO05D005748 5.8e-126 455.3 501 51.3
AUR62024960 Chenopodium quinoa HOM05D000452 ORTHO05D005748 7.6e-126 454.9 448 55.4
DCAR_022745 Daucus carota HOM05D000452 ORTHO05D005748 3.8e-125 452.6 444 54.5
AUR62042196 Chenopodium quinoa HOM05D000452 ORTHO05D005748 4.9e-125 452.2 454 55.9
Nn2g10818 Nelumbo nucifera HOM05D000452 ORTHO05D005748 6.4e-125 451.8 494 53.8
ECA248G3240 Erigeron canadensis HOM05D000452 ORTHO05D005748 1.1e-124 451.1 426 55.4
Eucgr.B02508 Eucalyptus grandis HOM05D000452 ORTHO05D005748 3.2e-124 449.5 491 52.1
HanXRQChr07g0195801 Helianthus annuus HOM05D000452 ORTHO05D005748 1.2e-123 447.6 482 50.0
Oeu014003.1 Olea europaea HOM05D000452 ORTHO05D005748 2.1e-123 446.8 462 51.7
CsaV3_1G013990 Cucumis sativus L. HOM05D000452 ORTHO05D005748 6.0e-123 445.3 501 50.5
Sc06g0010310 Simmondsia chinensis HOM05D000452 ORTHO05D005748 1.0e-122 444.5 457 54.0
Cpa.g.sc279.1 Carica papaya HOM05D000452 ORTHO05D005748 1.8e-122 443.7 439 56.7
EL10Ac9g22533 Beta vulgaris HOM05D000452 ORTHO05D005748 1.1e-121 441.0 476 51.5
Aqoxy1G01223 Aquilegia oxysepala HOM05D000452 ORTHO05D005748 1.5e-121 440.7 444 54.3
Psat7g192440 Pisum sativum HOM05D000452 ORTHO05D005748 2.5e-121 439.9 490 52.4
PGR102G2372 Punica granatum HOM05D000452 ORTHO05D005748 4.3e-121 439.1 490 50.8
SGA_v2.0_scaffold180G39657 Striga asiatica HOM05D000452 ORTHO05D005748 5.6e-121 438.7 432 55.1
ECA238G2818 Erigeron canadensis HOM05D000452 ORTHO05D005748 1.8e-119 433.7 473 49.7
Zm00001eb271200 Zea mays HOM05D000452 ORTHO05D005748 1.5e-118 430.6 519 49.7
Lj2C1024T12 Lonicera japonica HOM05D000452 ORTHO05D005748 2.6e-118 429.9 453 51.0
Dinv02128 Davidia involucrata HOM05D000452 ORTHO05D005748 1.0e-117 427.9 473 51.2
Zm00001eb376480 Zea mays HOM05D000452 ORTHO05D005748 1.4e-116 424.1 475 51.6
Lsat_1_v5_gn_1_64080 Lactuca sativa HOM05D000452 ORTHO05D005748 3.5e-115 419.5 419 53.9
PSO384G2013 Papaver somniferum HOM05D000452 ORTHO05D005748 4.3e-113 412.5 448 52.7
Oeu037301.1 Olea europaea HOM05D000452 ORTHO05D005748 9.6e-113 411.4 501 47.3
SEGI_04235 Sequoiadendron giganteum HOM05D000452 ORTHO05D005748 2.1e-112 410.2 509 46.6
CDE02G3238 Ceratophyllum demersum HOM05D000452 ORTHO05D005748 4.1e-111 406.0 434 52.1
PSO339G5930 Papaver somniferum HOM05D000452 ORTHO05D005748 6.9e-111 405.2 447 51.0
unitig_736.g22410 Utricularia gibba HOM05D000452 ORTHO05D005748 1.7e-109 400.6 519 46.1
Ca_19270_v3 Cicer arietinum L. HOM05D000452 ORTHO05D005748 1.0e-106 391.3 491 48.7
CiPaw.14G081900 Carya illinoinensis HOM05D000452 ORTHO05D005748 2.8e-104 383.3 445 50.3
ATR0048G028 Amborella trichopoda HOM05D000452 ORTHO05D005748 9.0e-103 378.3 433 50.1
Lsat_1_v5_gn_2_100281 Lactuca sativa HOM05D000452 ORTHO05D005748 2.0e-102 377.1 371 53.9
Lj1C203G7 Lonicera japonica HOM05D000452 ORTHO05D005748 3.4e-102 376.3 457 47.9
TPR.G6153 Trifolium pratense HOM05D000452 ORTHO05D005748 6.5e-101 372.1 482 49.2
Atru.chr3.3611 Acer truncatum HOM05D000452 ORTHO05D005748 3.6e-99 366.3 411 51.6
PSO063G2649 Papaver somniferum HOM05D000452 ORTHO05D005748 1.4e-95 354.4 401 50.1
HPP92_008616 Vanilla planifolia HOM05D000452 ORTHO05D005748 6.5e-93 345.5 307 57.3
CsaV3_1G013980 Cucumis sativus L. HOM05D000452 ORTHO05D005748 8.5e-93 345.1 491 44.2
Peaxi162Scf00034g00107 Petunia axillaris HOM05D000452 ORTHO05D005748 1.1e-92 344.7 477 42.8
MBI07_g26020_MAGBIO Magnolia biondii HOM05D000452 ORTHO05D005748 5.5e-92 342.4 418 48.6
Oeu001281.1 Olea europaea HOM05D000452 ORTHO05D005748 1.7e-85 320.9 385 50.1
Mapoly0061s0093 Marchantia polymorpha HOM05D000452 ORTHO05D005748 3.2e-84 316.6 473 41.4
SalBow3G4114 Salvia bowleyana HOM05D000452 ORTHO05D005748 1.2e-83 314.7 338 52.1
Lsat_1_v5_gn_9_37660 Lactuca sativa HOM05D000452 ORTHO05D005748 8.8e-82 308.5 305 53.8
Hund08167 Selenicereus undatus HOM05D000452 ORTHO05D005748 1.9e-76 290.8 394 46.2
RhsimUnG0046400 Rhododendron simsii HOM05D000452 ORTHO05D005748 3.2e-76 290.0 420 43.1
Pp3c16_24250 Physcomitrium patens HOM05D000452 ORTHO05D005748 5.2e-74 282.7 398 41.7
Lsat_1_v5_gn_2_91861 Lactuca sativa HOM05D000452 ORTHO05D005748 6.3e-72 275.8 299 50.8
SHI19559 Sapria himalayana HOM05D000452 ORTHO05D005748 1.8e-71 274.2 253 54.2
AagrBONN_evm.TU.Sc2ySwM_117.3844 Anthoceros agrestis HOM05D000452 ORTHO05D005748 2.5e-68 263.8 308 48.7
Dinv01781 Davidia involucrata HOM05D000452 ORTHO05D005748 2.6e-65 253.8 187 64.7
Os06g0158200 Oryza sativa ssp. japonica HOM05D000452 ORTHO05D005748 2.4e-63 247.3 188 67.6
SMO134G0053 Selaginella moellendorffii HOM05D000452 ORTHO05D005748 9.2e-63 245.4 291 45.7
DCAR_018802 Daucus carota HOM05D000452 ORTHO05D005748 1.5e-57 228.0 286 44.4
CBR_g51944 Chara braunii HOM05D000452 ORTHO05D005748 9.2e-55 218.8 482 32.2
MBI10_g19822_MAGBIO Magnolia biondii HOM05D000452 ORTHO05D005748 9.8e-49 198.7 308 42.2
TPR.G26833 Trifolium pratense HOM05D000452 ORTHO05D005748 7.0e-47 192.6 132 68.2
Dinv32733 Davidia involucrata HOM05D000452 ORTHO05D005748 1.5e-44 184.9 248 46.4
Lsat_1_v5_gn_5_88800 Lactuca sativa HOM05D000452 ORTHO05D005748 2.5e-44 184.1 184 54.9
Cre01.g022600 Chlamydomonas reinhardtii HOM05D000452 ORTHO05D005748 1.7e-37 161.4 331 31.7
PRCOL_00001963 Prasinoderma coloniale HOM05D000452 ORTHO05D005748 4.0e-34 150.2 412 30.1
C04p54260 Brassica napus HOM05D000452 ORTHO05D005748 2.0e-33 147.9 84 81.0
Lsat_1_v5_gn_3_50740 Lactuca sativa HOM05D000452 ORTHO05D005748 2.7e-30 137.5 145 55.2
BcaC02g08433 Brassica carinata HOM05D000452 ORTHO05D005748 1.1e-23 115.5 66 78.8
Hund08166 Selenicereus undatus HOM05D000452 ORTHO05D005748 1.1e-23 115.5 78 66.7
BolC4t23229H Brassica oleracea HOM05D000452 ORTHO05D005748 1.4e-23 115.2 73 72.6
BolC2t09709H Brassica oleracea HOM05D000452 ORTHO05D005748 7.1e-23 112.8 73 71.2
MD11G1150200 Malus domestica HOM05D000452 ORTHO05D005748 3.5e-22 110.5 80 61.2
SHI19558 Sapria himalayana HOM05D000452 ORTHO05D000031 7.3e-20 102.8 181 35.9
HPP92_008615 Vanilla planifolia HOM05D000452 ORTHO05D005748 1.2e-14 85.5 167 34.7
C07p54990 Brassica napus HOM05D000452 ORTHO05D005748 2.1e-14 84.7 46 82.6
BcaC02g07555 Brassica carinata HOM05D000452 ORTHO05D005748 3.0e-13 80.9 67 59.7
MBI15_g38533_MAGBIO Magnolia biondii HOM05D000452 ORTHO05D005748 1.1e-10 72.4 114 45.6
Lsat_1_v5_gn_4_22460 Lactuca sativa HOM05D000344 ORTHO05D005714 6.9e-10 69.7 57 61.4
PRCOL_00002815 Prasinoderma coloniale HOM05D000452 ORTHO05D333388 3.8e-08 63.9 376 23.4


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