Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaB03g13355 Brassica carinata HOM05D009615 ORTHO05D011760 3.6e-70 268.1 130 100.0
A08p35360 Brassica napus HOM05D009615 ORTHO05D011760 1.0e-45 186.8 116 81.0
C08p03480 Brassica napus HOM05D009615 ORTHO05D011760 1.4e-45 186.4 117 82.1
BolC8t47150H Brassica oleracea HOM05D009615 ORTHO05D011760 1.4e-45 186.4 117 82.1
BraA08t35442Z Brassica rapa HOM05D009615 ORTHO05D011760 3.1e-45 185.3 116 80.2
Sp1g06660 Schrenkiella parvula HOM05D009615 ORTHO05D011760 8.3e-43 177.2 117 76.9
CARHR007810 Cardamine hirsuta HOM05D009615 ORTHO05D011760 2.3e-40 169.1 120 72.5
Thhalv10009338m.g Eutrema salsugineum HOM05D009615 ORTHO05D011760 2.3e-40 169.1 97 81.4
AL1G18370 Arabidopsis lyrata HOM05D009615 ORTHO05D011760 3.0e-40 168.7 114 76.3
Carub.0001s0738 Capsella rubella HOM05D009615 ORTHO05D011760 3.9e-40 168.3 99 78.8
AT1G08035 Arabidopsis thaliana HOM05D009615 ORTHO05D011760 6.2e-38 161.0 114 72.8
BcaB02g06692 Brassica carinata HOM05D009615 ORTHO05D011760 4.6e-17 91.7 124 48.4
Sp4g11120 Schrenkiella parvula HOM05D009615 ORTHO05D011760 8.7e-16 87.4 111 43.2
Thhalv10017369m.g Eutrema salsugineum HOM05D009615 ORTHO05D011760 1.5e-15 86.7 122 43.4
AT2G28330 Arabidopsis thaliana HOM05D009615 ORTHO05D011760 1.1e-13 80.5 107 43.9
THA.LOC104806658 Tarenaya hassleriana HOM05D009615 ORTHO05D011760 6.9e-13 77.8 126 41.3
AL4G21750 Arabidopsis lyrata HOM05D009615 ORTHO05D011760 9.9e-12 73.9 100 41.0
CARHR121260 Cardamine hirsuta HOM05D009615 ORTHO05D011760 3.2e-10 68.9 116 40.5
Aa31LG5G7890 Aethionema arabicum HOM05D009615 ORTHO05D011760 1.7e-08 63.2 141 39.0
Carub.0004s0923 Capsella rubella HOM05D009615 ORTHO05D011760 1.7e-08 63.2 135 36.3
TWI74G0480 Tripterygium wilfordii HOM05D007287 ORTHO05D008965 4.3e-07 58.5 114 33.3
Duzib268G0768 Durio zibethinus HOM05D007287 ORTHO05D008965 5.6e-07 58.2 120 34.2
Thecc.04G001200 Theobroma cacao HOM05D007287 ORTHO05D008965 5.6e-07 58.2 120 35.0
Gohir.A02G000300 Gossypium hirsutum HOM05D007287 ORTHO05D008965 9.6e-07 57.4 82 42.7
Gohir.D02G000600 Gossypium hirsutum HOM05D007287 ORTHO05D008965 1.3e-06 57.0 82 42.7
Gorai.005G001000 Gossypium raimondii HOM05D007287 ORTHO05D008965 1.3e-06 57.0 82 42.7


User provided reference genes

Program Settings