Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaB03g13311 Brassica carinata HOM05D004289 ORTHO05D005141 2.0e-50 202.2 106 100.0
Sp1g08260 Schrenkiella parvula HOM05D004289 ORTHO05D005141 2.9e-46 188.3 106 90.6
Thhalv10009166m.g Eutrema salsugineum HOM05D004289 ORTHO05D005141 3.2e-45 184.9 106 88.7
CARHR009620 Cardamine hirsuta HOM05D004289 ORTHO05D005141 4.7e-44 181.0 106 86.8
AL1G20190 Arabidopsis lyrata HOM05D004289 ORTHO05D005141 5.2e-43 177.6 106 84.9
BcaC07g41867 Brassica carinata HOM05D004289 ORTHO05D005141 4.4e-42 174.5 106 84.0
C08p49340 Brassica napus HOM05D004289 ORTHO05D005141 4.4e-42 174.5 106 84.0
AT1G09645 Arabidopsis thaliana HOM05D004289 ORTHO05D005141 4.9e-41 171.0 107 83.2
Aa31LG1G5340 Aethionema arabicum HOM05D004289 ORTHO05D005141 3.1e-40 168.3 106 81.1
C08p13100 Brassica napus HOM05D004289 ORTHO05D005141 9.2e-40 166.8 106 84.9
Carub.0001s0900 Capsella rubella HOM05D004289 ORTHO05D005141 9.2e-40 166.8 106 83.0
BolC8t52471H Brassica oleracea HOM05D004289 ORTHO05D005141 5.9e-39 164.1 116 75.9
C05p07700 Brassica napus HOM05D004289 ORTHO05D005141 1.7e-38 162.5 105 83.8
Sp2g05730 Schrenkiella parvula HOM05D004289 ORTHO05D005141 2.3e-38 162.2 106 79.2
THA.LOC104823700 Tarenaya hassleriana HOM05D004289 ORTHO05D005141 1.5e-37 159.5 106 77.4
CARHR054450 Cardamine hirsuta HOM05D004289 ORTHO05D005141 3.3e-37 158.3 106 77.4
BraA06t23844Z Brassica rapa HOM05D004289 ORTHO05D005141 1.8e-35 152.5 109 78.0
AL1G67510 Arabidopsis lyrata HOM05D004289 ORTHO05D005141 8.9e-35 150.2 108 76.9
THA.LOC104816824 Tarenaya hassleriana HOM05D004289 ORTHO05D005141 3.4e-34 148.3 106 75.5
AT1G57765 Arabidopsis thaliana HOM05D004289 ORTHO05D005141 4.4e-34 147.9 108 74.1
A06p06330 Brassica napus HOM05D004289 ORTHO05D005141 3.7e-33 144.8 139 63.3
BolC5t29521H Brassica oleracea HOM05D004289 ORTHO05D005141 4.9e-33 144.4 134 64.9
Thhalv10023770m.g Eutrema salsugineum HOM05D004289 ORTHO05D005141 1.1e-32 143.3 106 71.7
BolC8t48938H Brassica oleracea HOM05D002143 ORTHO05D002260 1.2e-31 139.8 80 90.0
BraA08t35355Z Brassica rapa HOM05D002143 ORTHO05D002260 7.8e-31 137.1 80 87.5
Carub.0002s0680 Capsella rubella HOM05D004289 ORTHO05D005141 1.3e-30 136.3 109 68.8
Gohir.A03G215700 Gossypium hirsutum HOM05D004289 ORTHO05D005141 7.3e-29 130.6 97 69.1
Gohir.D02G237200 Gossypium hirsutum HOM05D004289 ORTHO05D005141 1.4e-27 126.3 95 67.4
Gorai.005G265800 Gossypium raimondii HOM05D004289 ORTHO05D005141 1.4e-27 126.3 95 67.4
MD08G1244000 Malus domestica HOM05D004289 ORTHO05D005141 4.0e-27 124.8 93 66.7
Duzib052G0484 Durio zibethinus HOM05D004289 ORTHO05D005141 1.2e-26 123.2 97 64.9
Thecc.02G016600 Theobroma cacao HOM05D004289 ORTHO05D005141 1.2e-26 123.2 97 67.0
MD15G1438300 Malus domestica HOM05D004289 ORTHO05D005141 2.2e-25 119.0 92 65.2
THA.LOC104820335 Tarenaya hassleriana HOM05D004289 ORTHO05D005141 6.4e-25 117.5 97 64.9
Prupe.1G581300 Prunus persica HOM05D004289 ORTHO05D005141 1.1e-24 116.7 92 64.1
CSS0038337 Camellia sinensis var. sinensis HOM05D004289 ORTHO05D005141 1.6e-23 112.8 100 61.0
TAR381G0514 Trochodendron aralioides HOM05D004289 ORTHO05D005141 1.6e-23 112.8 100 60.0
Manes.10G116200 Manihot esculenta HOM05D004289 ORTHO05D005141 3.5e-23 111.7 95 65.3
GSVIVG01023230001 Vitis vinifera HOM05D004289 ORTHO05D005141 3.5e-23 111.7 94 64.9
Sc16g0004250 Simmondsia chinensis HOM05D004289 ORTHO05D005141 4.6e-23 111.3 98 62.2
Sabra01G0171700 Salix brachista HOM05D004289 ORTHO05D005141 6.0e-23 110.9 107 57.9
Potri.004G226100 Populus trichocarpa HOM05D004289 ORTHO05D005141 7.8e-23 110.5 107 57.9
Aa31LG2G11220 Aethionema arabicum HOM05D004289 ORTHO05D005141 1.0e-22 110.2 106 58.5
COL.COLO4_17708 Corchorus olitorius HOM05D004289 ORTHO05D005141 1.3e-22 109.8 97 58.8
CSS0038950 Camellia sinensis var. sinensis HOM05D004289 ORTHO05D005141 1.7e-22 109.4 106 56.6
GSVIVG01025943001 Vitis vinifera HOM05D004289 ORTHO05D005141 1.7e-22 109.4 111 54.1
TAR628G0462 Trochodendron aralioides HOM05D004289 ORTHO05D005141 2.3e-22 109.0 101 54.5
AUR62028456 Chenopodium quinoa HOM05D004289 ORTHO05D005141 8.6e-22 107.1 98 60.2
PSO170G0294 Papaver somniferum HOM05D004289 ORTHO05D005141 1.1e-21 106.7 106 54.7
Nn5g27488 Nelumbo nucifera HOM05D004289 ORTHO05D005141 1.9e-21 105.9 98 55.1
PSO017G2658 Papaver somniferum HOM05D004289 ORTHO05D005141 1.9e-21 105.9 103 54.4
AUR62042238 Chenopodium quinoa HOM05D004289 ORTHO05D005141 3.3e-21 105.1 98 58.2
Sabra19G0088300 Salix brachista HOM05D004289 ORTHO05D005141 5.6e-21 104.4 107 53.3
MBI06_g06694_MAGBIO Magnolia biondii HOM05D004289 ORTHO05D005141 7.3e-21 104.0 97 54.6
Ah.02g128340 Amaranthus hybridus HOM05D004289 ORTHO05D005141 1.6e-20 102.8 98 56.1
SGA_v2.0_scaffold131G34372 Striga asiatica HOM05D004289 ORTHO05D005141 1.6e-20 102.8 106 58.5
Actinidia38989 Actinidia chinensis HOM05D004289 ORTHO05D005141 2.1e-20 102.4 107 55.1
Lsat_1_v5_gn_5_104580 Lactuca sativa HOM05D004289 ORTHO05D005141 2.1e-20 102.4 98 59.2
MELO3C016488.2 Cucumis melo HOM05D004289 ORTHO05D005141 2.8e-20 102.1 91 59.3
Manes.07G025900 Manihot esculenta HOM05D004289 ORTHO05D005141 2.8e-20 102.1 93 61.3
Ciclev10003782m.g Citrus clementina HOM05D004289 ORTHO05D005141 3.6e-20 101.7 80 68.8
Migut.B00750 Erythranthe guttata HOM05D004289 ORTHO05D005141 3.6e-20 101.7 106 53.8
Potri.019G077100 Populus trichocarpa HOM05D004289 ORTHO05D005141 3.6e-20 101.7 106 52.8
QL09p003196 Quercus lobata HOM05D004289 ORTHO05D005141 6.2e-20 100.9 97 55.7
QL09p004791 Quercus lobata HOM05D004289 ORTHO05D005141 6.2e-20 100.9 97 55.7
TPR.G34161 Trifolium pratense HOM05D004289 ORTHO05D005141 6.2e-20 100.9 102 60.8
Nitab4.5_0005169g0070 Nicotiana tabacum HOM05D004289 ORTHO05D005141 1.1e-19 100.1 81 64.2
Duzib248G0764 Durio zibethinus HOM05D004289 ORTHO05D005141 1.8e-19 99.4 95 58.9
ECA236G0617 Erigeron canadensis HOM05D004289 ORTHO05D005141 3.1e-19 98.6 95 54.7
RcHm_v2.0_Chr7g0220501 Rosa chinensis HOM05D004289 ORTHO05D005141 3.1e-19 98.6 107 55.1
Potri.003G005400 Populus trichocarpa HOM05D004289 ORTHO05D005141 4.0e-19 98.2 95 57.9
Nitab4.5_0029023g0010 Nicotiana tabacum HOM05D004289 ORTHO05D005141 1.2e-18 96.7 107 50.5
EL10Ac6g14140 Beta vulgaris HOM05D004289 ORTHO05D005141 1.5e-18 96.3 80 65.0
CiPaw.04G012500 Carya illinoinensis HOM05D004289 ORTHO05D005141 1.5e-18 96.3 93 58.1
Medtr4g032200 Medicago truncatula HOM05D004289 ORTHO05D005141 1.5e-18 96.3 96 59.4
VMungo0540G0867 Vigna mungo HOM05D004289 ORTHO05D005141 1.5e-18 96.3 88 61.4
TWI23G1156 Tripterygium wilfordii HOM05D004289 ORTHO05D005141 2.0e-18 95.9 95 52.6
Eucgr.I02780 Eucalyptus grandis HOM05D004289 ORTHO05D005141 2.6e-18 95.5 107 54.2
Prupe.1G549500 Prunus persica HOM05D004289 ORTHO05D005141 2.6e-18 95.5 88 59.1
FAN10G0807 Fragaria x ananassa HOM05D004289 ORTHO05D005141 4.4e-18 94.7 106 50.0
TWI14G0848 Tripterygium wilfordii HOM05D004289 ORTHO05D005141 7.5e-18 94.0 97 50.5
Aqoxy5G00854 Aquilegia oxysepala HOM05D004289 ORTHO05D005141 9.8e-18 93.6 98 51.0
CiPaw.03G018600 Carya illinoinensis HOM05D004289 ORTHO05D005141 2.9e-17 92.0 108 48.1
Glyma.08G237900 Glycine max HOM05D004289 ORTHO05D005141 6.4e-17 90.9 99 50.5
MBI17_g24966_MAGBIO Magnolia biondii HOM05D004289 ORTHO05D005141 8.3e-17 90.5 82 58.5
MSTRG.20324 Avicennia marina HOM05D004289 ORTHO05D005141 1.1e-16 90.1 107 53.3
Lsat_1_v5_gn_9_119620 Lactuca sativa HOM05D004289 ORTHO05D005141 1.1e-16 90.1 96 53.1
vmacro19856 Vaccinium macrocarpon HOM05D004289 ORTHO05D005141 1.1e-16 90.1 85 61.2
HPP92_002677 Vanilla planifolia HOM05D004289 ORTHO05D005141 1.1e-16 90.1 97 49.5
Peaxi162Scf00688g00334 Petunia axillaris HOM05D004289 ORTHO05D005141 1.4e-16 89.7 88 52.3
Sopen11g012540 Solanum pennellii HOM05D004289 ORTHO05D005141 1.9e-16 89.4 90 51.1
HPP92_002618 Vanilla planifolia HOM05D004289 ORTHO05D005141 1.9e-16 89.4 97 49.5
Atru.chr6.550 Acer truncatum HOM05D004289 ORTHO05D005141 2.4e-16 89.0 57 77.2
MELO3C022208.2 Cucumis melo HOM05D004289 ORTHO05D005141 2.4e-16 89.0 92 54.3
Migut.C01335 Erythranthe guttata HOM05D004289 ORTHO05D005141 2.4e-16 89.0 91 52.7
QL02p100957 Quercus lobata HOM05D004289 ORTHO05D005141 2.4e-16 89.0 106 50.0
Oeu058640.2 Olea europaea HOM05D004289 ORTHO05D005141 3.2e-16 88.6 85 56.5
HanXRQChr06g0182751 Helianthus annuus HOM05D004289 ORTHO05D005141 4.1e-16 88.2 88 56.8
Lj3g0023226 Lotus japonicus HOM05D004289 ORTHO05D005141 4.1e-16 88.2 94 51.1
Phvul.011G000300 Phaseolus vulgaris HOM05D004289 ORTHO05D005141 4.1e-16 88.2 89 52.8
Zm00001eb288300 Zea mays HOM05D004289 ORTHO05D005141 4.1e-16 88.2 89 53.9
CsaV3_5G040360 Cucumis sativus L. HOM05D004289 ORTHO05D005141 7.1e-16 87.4 92 52.2
Nitab4.5_0000016g0420 Nicotiana tabacum HOM05D004289 ORTHO05D005141 7.1e-16 87.4 87 52.9
FAN18G0926 Fragaria x ananassa HOM05D004289 ORTHO05D005141 1.2e-15 86.7 104 47.1
ClCG08G000420 Citrullus lanatus HOM05D004289 ORTHO05D005141 1.6e-15 86.3 104 49.0
MBI18_g30384_MAGBIO Magnolia biondii HOM05D004289 ORTHO05D005141 2.1e-15 85.9 82 56.1
PGSC0003DMG400025523 Solanum tuberosum HOM05D004289 ORTHO05D005141 2.1e-15 85.9 88 50.0
Phvul.006G220000 Phaseolus vulgaris HOM05D004289 ORTHO05D005141 2.7e-15 85.5 91 53.8
SalBow7G0958 Salvia bowleyana HOM05D004289 ORTHO05D005141 3.5e-15 85.1 76 55.3
Sed0006384 Sechium edule HOM05D004289 ORTHO05D005141 3.5e-15 85.1 93 52.7
MD08G1216400 Malus domestica HOM05D004289 ORTHO05D005141 6.0e-15 84.3 93 52.7
Psat7g226600 Pisum sativum HOM05D004289 ORTHO05D005141 1.0e-14 83.6 87 55.2
FvH4_5g28260 Fragaria vesca HOM05D004289 ORTHO05D005141 1.3e-14 83.2 63 63.5
Os05g0419600 Oryza sativa ssp. japonica HOM05D004289 ORTHO05D005141 1.3e-14 83.2 89 51.7
ATR1136G135 Amborella trichopoda HOM05D004289 ORTHO05D005141 1.7e-14 82.8 81 59.3
VMungo0540G1552 Vigna mungo HOM05D004289 ORTHO05D005141 1.7e-14 82.8 63 65.1
Haze_10030 Corylus avellana HOM05D004289 ORTHO05D005141 2.3e-14 82.4 70 62.9
FAN13G3078 Fragaria x ananassa HOM05D004289 ORTHO05D005141 3.9e-14 81.6 92 50.0
Cc10_g09380 Coffea canephora HOM05D004289 ORTHO05D005141 5.1e-14 81.3 88 52.3
MD05G1210300 Malus domestica HOM05D004289 ORTHO05D005141 6.6e-14 80.9 93 49.5
FvH4_5g32580 Fragaria vesca HOM05D004289 ORTHO05D005141 8.6e-14 80.5 92 48.9
RcHm_v2.0_Chr7g0229261 Rosa chinensis HOM05D004289 ORTHO05D005141 8.6e-14 80.5 102 48.0
Zm00001eb349170 Zea mays HOM05D004289 ORTHO05D005141 8.6e-14 80.5 89 50.6
Cfa008122 Carpinus fangiana HOM05D000042 ORTHO05D000028 1.1e-13 80.1 74 58.1
Sed0020386 Sechium edule HOM05D004289 ORTHO05D005141 1.5e-13 79.7 94 53.2
arahy.Tifrunner.gnm1.ann1.291MDK Arachis hypogaea HOM05D004289 ORTHO05D005141 1.9e-13 79.3 94 55.3
unitig_32.g11200 Utricularia gibba HOM05D004289 ORTHO05D005141 2.5e-13 79.0 75 56.0
MD15G1403500 Malus domestica HOM05D004289 ORTHO05D005141 3.3e-13 78.6 94 42.6
Gohir.D04G177000 Gossypium hirsutum HOM05D004289 ORTHO05D005141 4.3e-13 78.2 95 48.4
Gorai.012G169900 Gossypium raimondii HOM05D004289 ORTHO05D005141 4.3e-13 78.2 95 48.4
HanXRQChr03g0067991 Helianthus annuus HOM05D004289 ORTHO05D005141 4.3e-13 78.2 91 51.6
Gohir.A04G133900 Gossypium hirsutum HOM05D004289 ORTHO05D005141 5.6e-13 77.8 97 48.5
Oeu048223.2 Olea europaea HOM05D004289 ORTHO05D005141 1.2e-12 76.6 96 41.7
unitig_748.g7732 Utricularia gibba HOM05D004289 ORTHO05D005141 3.6e-12 75.1 79 51.9
RcHm_v2.0_Chr5g0063911 Rosa chinensis HOM05D004289 ORTHO05D005141 4.7e-12 74.7 76 53.9
Haze_13910 Corylus avellana HOM05D002143 ORTHO05D002260 6.2e-12 74.3 93 49.5
RcHm_v2.0_Chr3g0495521 Rosa chinensis HOM05D004289 ORTHO05D005141 1.4e-11 73.2 76 52.6
TPR.G2097 Trifolium pratense HOM05D004289 ORTHO05D005141 1.4e-11 73.2 53 67.9
arahy.Tifrunner.gnm1.ann1.M3EZX1 Arachis hypogaea HOM05D004289 ORTHO05D005141 1.8e-11 72.8 89 55.1
CDE08G0453 Ceratophyllum demersum HOM05D004289 ORTHO05D005141 3.1e-11 72.0 74 50.0
CiPaw.05G003600 Carya illinoinensis HOM05D004289 ORTHO05D005141 5.2e-11 71.2 70 58.6
PGR042G0739 Punica granatum HOM05D004289 ORTHO05D005141 8.9e-11 70.5 92 45.7
Glyma.12G165600 Glycine max HOM05D004289 ORTHO05D005141 2.0e-10 69.3 104 48.1
Glyma.16G002000 Glycine max HOM05D004289 ORTHO05D005141 2.0e-10 69.3 92 44.6
Cc02_g23340 Coffea canephora HOM05D004289 ORTHO05D005141 2.6e-10 68.9 107 43.0
SEGI_28610 Sequoiadendron giganteum HOM05D004061 ORTHO05D004693 5.8e-10 67.8 86 41.9
FAN04G1595 Fragaria x ananassa HOM05D004289 ORTHO05D005141 7.6e-10 67.4 85 44.7
FAN18G1872 Fragaria x ananassa HOM05D004289 ORTHO05D005141 7.6e-10 67.4 84 45.2
Lalb_Chr18g0061091 Lupinus albus HOM05D004289 ORTHO05D005141 1.3e-09 66.6 91 45.1
Actinidia01613 Actinidia chinensis HOM05D000487 ORTHO05D000405 1.7e-09 66.2 77 46.8
Lalb_Chr15g0090801 Lupinus albus HOM05D004289 ORTHO05D005141 1.7e-09 66.2 91 44.0
SalBow7G1625 Salvia bowleyana HOM05D004289 ORTHO05D005141 2.2e-09 65.9 78 52.6
Sopen01g045750 Solanum pennellii HOM05D004289 ORTHO05D005141 2.4e-08 62.4 101 41.6
Peaxi162Scf00011g00155 Petunia axillaris HOM05D004289 ORTHO05D005141 5.4e-08 61.2 106 39.6
DCAR_001703 Daucus carota HOM05D004289 ORTHO05D005141 1.2e-07 60.1 107 42.1
arahy.Tifrunner.gnm1.ann1.2Z03QX Arachis hypogaea HOM05D004289 ORTHO05D005141 4.6e-07 58.2 97 40.2
CARHR163390 Cardamine hirsuta HOM05D004061 ORTHO05D004693 1.7e-06 56.2 90 37.8
Sp5g08850 Schrenkiella parvula HOM05D004061 ORTHO05D004693 3.0e-06 55.5 90 38.9
AT3G53490 Arabidopsis thaliana HOM05D004061 ORTHO05D004693 5.1e-06 54.7 102 37.3
EL10Ac7g17278 Beta vulgaris HOM05D004061 ORTHO05D004693 5.1e-06 54.7 76 43.4
CiPaw.09G185500 Carya illinoinensis HOM05D004061 ORTHO05D004693 8.6e-06 53.9 72 45.8


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