Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaB03g13286 Brassica carinata HOM05D000974 ORTHO05D091645 8.7e-37 156.8 97 100.0
AL1G20430 Arabidopsis lyrata HOM05D000974 ORTHO05D006000 1.2e-06 56.6 28 96.4
AT1G09830 Arabidopsis thaliana HOM05D000974 ORTHO05D006000 1.2e-06 56.6 28 96.4
BcaB03g13541 Brassica carinata HOM05D000974 ORTHO05D006000 1.2e-06 56.6 28 96.4
BcaC05g24841 Brassica carinata HOM05D000974 ORTHO05D006000 1.2e-06 56.6 28 96.4
BcaC07g38528 Brassica carinata HOM05D000974 ORTHO05D006000 1.2e-06 56.6 28 96.4
A06p06550 Brassica napus HOM05D000974 ORTHO05D006000 1.2e-06 56.6 28 96.4
C05p07940 Brassica napus HOM05D000974 ORTHO05D006000 1.2e-06 56.6 28 96.4
C08p13210 Brassica napus HOM05D000974 ORTHO05D006000 1.2e-06 56.6 28 96.4
BolC5t29546H Brassica oleracea HOM05D000974 ORTHO05D006000 1.2e-06 56.6 28 96.4
BolC8t48951H Brassica oleracea HOM05D000974 ORTHO05D006000 1.2e-06 56.6 28 96.4
BraA06t23866Z Brassica rapa HOM05D000974 ORTHO05D006000 1.2e-06 56.6 28 96.4
BraA08t35343Z Brassica rapa HOM05D000974 ORTHO05D006000 1.2e-06 56.6 28 96.4
Carub.0001s0921 Capsella rubella HOM05D000974 ORTHO05D006000 1.2e-06 56.6 28 96.4
CsaV3_3G006560 Cucumis sativus L. HOM05D000974 ORTHO05D006000 1.2e-06 56.6 28 96.4
Sed0019412 Sechium edule HOM05D000974 ORTHO05D006000 1.2e-06 56.6 28 96.4
THA.LOC104816783 Tarenaya hassleriana HOM05D000974 ORTHO05D006000 1.2e-06 56.6 28 96.4
THA.LOC104816816 Tarenaya hassleriana HOM05D000974 ORTHO05D006000 1.2e-06 56.6 28 96.4
CAN.G855.13 Capsicum annuum HOM05D000974 ORTHO05D006000 1.6e-06 56.2 28 96.4
Thhalv10007333m.g Eutrema salsugineum HOM05D000974 ORTHO05D006000 1.6e-06 56.2 28 92.9
Lj5C267T12 Lonicera japonica HOM05D000974 ORTHO05D006000 1.6e-06 56.2 28 96.4
Nitab4.5_0002347g0020 Nicotiana tabacum HOM05D000974 ORTHO05D006000 1.6e-06 56.2 28 96.4
Nitab4.5_0003893g0060 Nicotiana tabacum HOM05D000974 ORTHO05D006000 1.6e-06 56.2 28 96.4
Oeu030849.1 Olea europaea HOM05D000974 ORTHO05D006000 1.6e-06 56.2 28 96.4
Peaxi162Scf00011g01426 Petunia axillaris HOM05D000974 ORTHO05D006000 1.6e-06 56.2 28 96.4
Sp1g08460 Schrenkiella parvula HOM05D000974 ORTHO05D006000 1.6e-06 56.2 28 92.9
Solyc01g103440.3 Solanum lycopersicum HOM05D000974 ORTHO05D006000 1.6e-06 56.2 28 96.4
Sopen01g045790 Solanum pennellii HOM05D000974 ORTHO05D006000 1.6e-06 56.2 28 96.4
PGSC0003DMG400024886 Solanum tuberosum HOM05D000974 ORTHO05D006000 1.6e-06 56.2 28 96.4
ClCG10G007320 Citrullus lanatus HOM05D000974 ORTHO05D006000 2.7e-06 55.5 28 92.9
MELO3C016483.2 Cucumis melo HOM05D000974 ORTHO05D006000 2.7e-06 55.5 28 92.9
A08p34320 Brassica napus HOM05D000974 ORTHO05D006000 3.6e-06 55.1 28 92.9
CSS0010237 Camellia sinensis var. sinensis HOM05D000974 ORTHO05D006000 3.6e-06 55.1 28 92.9
CSS0038090 Camellia sinensis var. sinensis HOM05D000974 ORTHO05D006000 3.6e-06 55.1 28 92.9
DCAR_006665 Daucus carota HOM05D000974 ORTHO05D006000 3.6e-06 55.1 28 92.9
Dinv19422 Davidia involucrata HOM05D000974 ORTHO05D006000 3.6e-06 55.1 28 92.9
Rhsim07G0227600 Rhododendron simsii HOM05D000974 ORTHO05D006000 3.6e-06 55.1 28 92.9
Rhsim07G0227800 Rhododendron simsii HOM05D000974 ORTHO05D006000 3.6e-06 55.1 28 92.9
Rhsim11G0122100 Rhododendron simsii HOM05D000974 ORTHO05D006000 3.6e-06 55.1 28 92.9
HanXRQChr11g0329691 Helianthus annuus HOM05D000974 ORTHO05D006000 4.6e-06 54.7 28 92.9
Dinv29601 Davidia involucrata HOM05D000974 ORTHO05D006000 6.1e-06 54.3 28 89.3
unitig_8.g3587 Utricularia gibba HOM05D000974 ORTHO05D006000 6.1e-06 54.3 28 92.9
Aa31LG1G5090 Aethionema arabicum HOM05D000974 ORTHO05D006000 7.9e-06 53.9 28 89.3
Ah.08g220180 Amaranthus hybridus HOM05D000974 ORTHO05D006000 7.9e-06 53.9 28 92.9
EL10Ac7g16076 Beta vulgaris HOM05D000974 ORTHO05D006000 7.9e-06 53.9 28 92.9
CANSAT54G1032 Cannabis sativa HOM05D000974 ORTHO05D006000 7.9e-06 53.9 28 92.9
Cfa004480 Carpinus fangiana HOM05D000974 ORTHO05D006000 7.9e-06 53.9 28 92.9
CiPaw.06G174600 Carya illinoinensis HOM05D000974 ORTHO05D006000 7.9e-06 53.9 28 92.9
CDE02G0137 Ceratophyllum demersum HOM05D000974 ORTHO05D006000 7.9e-06 53.9 28 92.9
CDE04G1010 Ceratophyllum demersum HOM05D000974 ORTHO05D006000 7.9e-06 53.9 28 92.9
AUR62001730 Chenopodium quinoa HOM05D000974 ORTHO05D006000 7.9e-06 53.9 28 92.9
AUR62020045 Chenopodium quinoa HOM05D000974 ORTHO05D006000 7.9e-06 53.9 28 92.9
MBI06_g06706_MAGBIO Magnolia biondii HOM05D000974 ORTHO05D006000 7.9e-06 53.9 28 92.9
Manes.07G025100 Manihot esculenta HOM05D000974 ORTHO05D006000 7.9e-06 53.9 28 92.9
Os08g0191200 Oryza sativa ssp. japonica HOM05D000974 ORTHO05D006000 7.9e-06 53.9 28 92.9
PGR142G3566 Punica granatum HOM05D000974 ORTHO05D006000 7.9e-06 53.9 28 92.9
QL02p100861 Quercus lobata HOM05D000974 ORTHO05D006000 7.9e-06 53.9 28 92.9
Hund18885 Selenicereus undatus HOM05D000974 ORTHO05D006000 7.9e-06 53.9 28 92.9
vmacro01708 Vaccinium macrocarpon HOM05D000974 ORTHO05D006000 7.9e-06 53.9 28 89.3
Zm00001eb342350 Zea mays HOM05D000974 ORTHO05D006000 7.9e-06 53.9 28 92.9


User provided reference genes

Program Settings