Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaB03g12934 Brassica carinata HOM05D005557 ORTHO05D006748 9.5e-150 533.5 271 100.0
BraA08t34934Z Brassica rapa HOM05D005557 ORTHO05D006748 1.8e-124 449.5 283 84.5
BcaC07g38981 Brassica carinata HOM05D005557 ORTHO05D006748 9.0e-124 447.2 276 84.1
A08p29990 Brassica napus HOM05D005557 ORTHO05D006748 2.9e-122 442.2 272 85.3
CARHR019740 Cardamine hirsuta HOM05D005557 ORTHO05D006748 3.8e-122 441.8 277 84.1
AT1G19140 Arabidopsis thaliana HOM05D005557 ORTHO05D006748 7.1e-121 437.6 283 81.3
BcaB07g31927 Brassica carinata HOM05D005557 ORTHO05D006748 1.2e-120 436.8 292 79.1
Sp1g17050 Schrenkiella parvula HOM05D005557 ORTHO05D006748 3.5e-120 435.3 292 78.4
Thhalv10008278m.g Eutrema salsugineum HOM05D005557 ORTHO05D006748 4.6e-120 434.9 288 80.9
BolC5t30454H Brassica oleracea HOM05D005557 ORTHO05D006748 1.1e-118 430.3 287 79.4
C05p17510 Brassica napus HOM05D005557 ORTHO05D006748 1.5e-118 429.9 280 80.7
A06p15270 Brassica napus HOM05D005557 ORTHO05D006748 1.6e-117 426.4 277 81.2
BraA06t24641Z Brassica rapa HOM05D005557 ORTHO05D006748 1.6e-117 426.4 277 81.2
AL1G31720 Arabidopsis lyrata HOM05D005557 ORTHO05D006748 2.8e-117 425.6 280 79.3
BolC8t49542H Brassica oleracea HOM05D005557 ORTHO05D006748 5.3e-116 421.4 282 79.4
Aa31LG7G3880 Aethionema arabicum HOM05D005557 ORTHO05D006748 1.2e-115 420.2 286 78.0
C08p19230 Brassica napus HOM05D005557 ORTHO05D006748 2.0e-115 419.5 282 79.1
Carub.0001s1877 Capsella rubella HOM05D005557 ORTHO05D006748 3.4e-115 418.7 287 77.0
BcaC05g25811 Brassica carinata HOM05D005557 ORTHO05D006748 4.6e-112 408.3 264 79.9
THA.LOC104815688 Tarenaya hassleriana HOM05D005557 ORTHO05D006748 3.3e-110 402.1 225 86.7
BcaB03g12932 Brassica carinata HOM05D005557 ORTHO05D006748 7.9e-96 354.4 252 75.4
Potri.006G139800 Populus trichocarpa HOM05D005557 ORTHO05D006748 8.8e-95 350.9 233 73.8
Thecc.08G180200 Theobroma cacao HOM05D005557 ORTHO05D006748 1.7e-93 346.7 235 72.3
DCAR_024765 Daucus carota HOM05D005557 ORTHO05D006748 4.8e-93 345.1 246 69.5
Sabra06G0109200 Salix brachista HOM05D005557 ORTHO05D006748 5.3e-92 341.7 234 72.6
Cpa.g.sc28.12 Carica papaya HOM05D005557 ORTHO05D006748 2.0e-91 339.7 238 70.2
Gohir.A06G078200 Gossypium hirsutum HOM05D005557 ORTHO05D006748 5.9e-91 338.2 257 67.3
GSVIVG01015048001 Vitis vinifera HOM05D005557 ORTHO05D006748 5.9e-91 338.2 226 71.7
TWI32G1325 Tripterygium wilfordii HOM05D005557 ORTHO05D006748 7.7e-91 337.8 220 72.7
Duzib168G0027 Durio zibethinus HOM05D005557 ORTHO05D006748 1.0e-90 337.4 220 73.2
Manes.03G042000 Manihot esculenta HOM05D005557 ORTHO05D006748 1.0e-90 337.4 220 74.1
CSS0017494 Camellia sinensis var. sinensis HOM05D005557 ORTHO05D006748 1.3e-90 337.0 216 73.6
TWI63G1120 Tripterygium wilfordii HOM05D005557 ORTHO05D006748 1.3e-90 337.0 218 73.4
QL11p001232 Quercus lobata HOM05D005557 ORTHO05D006748 1.7e-90 336.7 235 70.2
Actinidia30238 Actinidia chinensis HOM05D005557 ORTHO05D006748 3.8e-90 335.5 212 74.5
Atru.chr7.1734 Acer truncatum HOM05D005557 ORTHO05D006748 5.0e-90 335.1 220 71.8
CANSAT56G2230 Cannabis sativa HOM05D005557 ORTHO05D006748 6.5e-90 334.7 219 73.1
CiPaw.03G203700 Carya illinoinensis HOM05D005557 ORTHO05D006748 6.5e-90 334.7 217 74.2
PGR142G2674 Punica granatum HOM05D005557 ORTHO05D006748 1.9e-89 333.2 232 70.3
Gorai.010G090300 Gossypium raimondii HOM05D005557 ORTHO05D006748 2.5e-89 332.8 250 67.6
Lj7A689T78 Lonicera japonica HOM05D005557 ORTHO05D006748 1.6e-88 330.1 231 71.9
Ciclev10009013m.g Citrus clementina HOM05D005557 ORTHO05D006748 2.7e-88 329.3 238 68.9
MD02G1257100 Malus domestica HOM05D005557 ORTHO05D006748 3.6e-88 328.9 220 73.2
Dinv42413 Davidia involucrata HOM05D005557 ORTHO05D006748 6.1e-88 328.2 225 70.7
Solyc07g042150.3 Solanum lycopersicum HOM05D005557 ORTHO05D006748 1.0e-87 327.4 231 70.1
PGSC0003DMG400016040 Solanum tuberosum HOM05D005557 ORTHO05D006748 1.0e-87 327.4 231 69.3
Cc06_g12460 Coffea canephora HOM05D005557 ORTHO05D006748 1.4e-87 327.0 225 68.9
COL.COLO4_18069 Corchorus olitorius HOM05D005557 ORTHO05D006748 1.4e-87 327.0 202 77.7
Hma1.2p1_0169F.1_g074410 Hydrangea macrophylla HOM05D005557 ORTHO05D006748 2.3e-87 326.2 219 69.9
Nitab4.5_0008784g0050 Nicotiana tabacum HOM05D005557 ORTHO05D006748 2.3e-87 326.2 217 71.9
Cfa002966 Carpinus fangiana HOM05D000173 ORTHO05D006748 5.1e-87 325.1 215 74.0
Sopen07g021740 Solanum pennellii HOM05D005557 ORTHO05D006748 5.1e-87 325.1 231 68.8
AUR62028302 Chenopodium quinoa HOM05D005557 ORTHO05D006748 6.7e-87 324.7 219 69.9
Nitab4.5_0000343g0390 Nicotiana tabacum HOM05D005557 ORTHO05D006748 6.7e-87 324.7 217 70.5
FAN01G0749 Fragaria x ananassa HOM05D005557 ORTHO05D006748 8.8e-87 324.3 243 68.7
FAN10G4084 Fragaria x ananassa HOM05D005557 ORTHO05D006748 8.8e-87 324.3 243 68.7
FvH4_7g05500 Fragaria vesca HOM05D005557 ORTHO05D006748 1.1e-86 323.9 243 68.7
Peaxi162Scf00880g00018 Petunia axillaris HOM05D005557 ORTHO05D006748 2.6e-86 322.8 219 69.9
RcHm_v2.0_Chr1g0332351 Rosa chinensis HOM05D005557 ORTHO05D006748 2.6e-86 322.8 241 67.6
vmacro17121 Vaccinium macrocarpon HOM05D000173 ORTHO05D006748 2.6e-86 322.8 243 65.0
FAN03G2003 Fragaria x ananassa HOM05D005557 ORTHO05D006748 3.3e-86 322.4 243 68.3
Glyma.13G111700 Glycine max HOM05D005557 ORTHO05D006748 7.4e-86 321.2 218 71.1
Aqoxy3G00735 Aquilegia oxysepala HOM05D005557 ORTHO05D006748 1.7e-85 320.1 221 68.8
Dinv25539 Davidia involucrata HOM05D005557 ORTHO05D006748 1.7e-85 320.1 225 68.9
Lsat_1_v5_gn_5_139800 Lactuca sativa HOM05D005557 ORTHO05D006748 2.2e-85 319.7 216 71.3
Prupe.2G075400 Prunus persica HOM05D005557 ORTHO05D006748 2.2e-85 319.7 220 70.5
Duzib187G0437 Durio zibethinus HOM05D005557 ORTHO05D006748 3.7e-85 318.9 236 67.4
Glyma.17G048000 Glycine max HOM05D005557 ORTHO05D006748 1.1e-84 317.4 218 69.7
Sed0003389 Sechium edule HOM05D005557 ORTHO05D006748 1.4e-84 317.0 219 67.6
Lj4g0021187 Lotus japonicus HOM05D005557 ORTHO05D006748 1.8e-84 316.6 219 69.4
TAR626G1135 Trochodendron aralioides HOM05D005557 ORTHO05D006748 1.8e-84 316.6 219 67.6
MD07G1063400 Malus domestica HOM05D005557 ORTHO05D006748 4.1e-84 315.5 220 70.0
SalBow6G3747 Salvia bowleyana HOM05D005557 ORTHO05D006748 7.0e-84 314.7 233 64.8
arahy.Tifrunner.gnm1.ann1.568RE3 Arachis hypogaea HOM05D005557 ORTHO05D006748 1.2e-83 313.9 238 66.0
EL10Ac8g19008 Beta vulgaris HOM05D005557 ORTHO05D006748 1.2e-83 313.9 243 62.6
MSTRG.10500 Avicennia marina HOM05D005557 ORTHO05D006748 1.5e-83 313.5 220 69.1
arahy.Tifrunner.gnm1.ann1.C56SYK Arachis hypogaea HOM05D005557 ORTHO05D006748 2.6e-83 312.8 238 66.0
Eucgr.C00788 Eucalyptus grandis HOM05D005557 ORTHO05D006748 2.6e-83 312.8 220 67.7
Gohir.D06G077200 Gossypium hirsutum HOM05D005557 ORTHO05D006748 2.6e-83 312.8 218 71.6
Lalb_Chr13g0299361 Lupinus albus HOM05D005557 ORTHO05D006748 2.6e-83 312.8 234 66.2
Lalb_Chr07g0181281 Lupinus albus HOM05D005557 ORTHO05D006748 2.9e-82 309.3 214 69.2
Medtr4g125000 Medicago truncatula HOM05D005557 ORTHO05D006748 3.8e-82 308.9 218 67.9
CAN.G32.9 Capsicum annuum HOM05D005557 ORTHO05D006748 5.0e-82 308.5 243 65.0
CsaV3_1G041220 Cucumis sativus L. HOM05D005557 ORTHO05D006748 6.5e-82 308.1 220 66.4
ClCG03G014930 Citrullus lanatus HOM05D005557 ORTHO05D006748 1.1e-81 307.4 219 65.8
VMungo1215G1068 Vigna mungo HOM05D005557 ORTHO05D006748 4.2e-81 305.4 242 63.2
Phvul.003G129500 Phaseolus vulgaris HOM05D005557 ORTHO05D006748 1.2e-80 303.9 217 66.8
Rhsim05G0005000 Rhododendron simsii HOM05D000173 ORTHO05D006748 1.2e-80 303.9 202 71.8
Aqoxy7G00284 Aquilegia oxysepala HOM05D005557 ORTHO05D006748 1.6e-80 303.5 217 66.8
SGA_v2.0_scaffold31G12665 Striga asiatica HOM05D005557 ORTHO05D006748 2.7e-80 302.8 242 60.7
CSS0008332 Camellia sinensis var. sinensis HOM05D005557 ORTHO05D006748 3.6e-80 302.4 216 69.0
Migut.J00918 Erythranthe guttata HOM05D005557 ORTHO05D006748 3.6e-80 302.4 237 64.1
ECA234G3626 Erigeron canadensis HOM05D005557 ORTHO05D006748 6.1e-80 301.6 232 63.4
MELO3C015535.2 Cucumis melo HOM05D005557 ORTHO05D006748 2.3e-79 299.7 240 61.7
Os03g0405100 Oryza sativa ssp. japonica HOM05D005557 ORTHO05D006748 3.9e-79 298.9 211 66.4
FAN10G0153 Fragaria x ananassa HOM05D005557 ORTHO05D006748 5.2e-79 298.5 243 65.0
PSO386G0114 Papaver somniferum HOM05D005557 ORTHO05D006748 5.2e-79 298.5 218 63.3
Sc18g0002770 Simmondsia chinensis HOM05D005557 ORTHO05D006748 5.2e-79 298.5 197 72.6
Ca_09310_v3 Cicer arietinum L. HOM05D005557 ORTHO05D006748 6.7e-79 298.1 230 65.7
Zm00001eb019520 Zea mays HOM05D005557 ORTHO05D006748 1.1e-78 297.4 212 67.0
Actinidia39641 Actinidia chinensis HOM05D005557 ORTHO05D006748 4.4e-78 295.4 209 67.9
CANSAT56G3371 Cannabis sativa HOM05D005557 ORTHO05D006748 7.4e-78 294.7 226 65.9
HPP92_013279 Vanilla planifolia HOM05D005557 ORTHO05D006748 2.2e-77 293.1 220 61.4
Hund26090 Selenicereus undatus HOM05D005557 ORTHO05D006748 1.4e-76 290.4 196 68.4
CDE05G0257 Ceratophyllum demersum HOM05D005557 ORTHO05D006748 1.8e-76 290.0 240 59.2
SEGI_32471 Sequoiadendron giganteum HOM05D005557 ORTHO05D006748 3.5e-75 285.8 214 61.7
TPR.G12564 Trifolium pratense HOM05D005557 ORTHO05D006748 4.5e-75 285.4 193 73.6
HanXRQChr12g0354431 Helianthus annuus HOM05D005557 ORTHO05D006748 2.2e-74 283.1 211 65.4
SGA_v2.0_scaffold296G47553 Striga asiatica HOM05D005557 ORTHO05D006748 2.9e-74 282.7 235 57.9
TAR624G0952 Trochodendron aralioides HOM05D005557 ORTHO05D006748 2.9e-66 256.1 172 72.1
unitig_85.g27246 Utricularia gibba HOM05D005557 ORTHO05D006748 1.1e-65 254.2 233 53.6
Pp3c26_10620 Physcomitrium patens HOM05D005557 ORTHO05D006748 9.4e-65 251.1 232 52.6
Psat7g057840 Pisum sativum HOM05D005557 ORTHO05D006748 1.4e-63 247.3 167 73.1
Mapoly0016s0081 Marchantia polymorpha HOM05D005557 ORTHO05D006748 2.2e-61 240.0 246 50.8
ATR1100G017 Amborella trichopoda HOM05D005557 ORTHO05D006748 2.8e-61 239.6 176 65.9
Thecc.09G074000 Theobroma cacao HOM05D005557 ORTHO05D006748 6.3e-61 238.4 240 55.4
MBI13_g00696_MAGBIO Magnolia biondii HOM05D005557 ORTHO05D006748 1.6e-59 233.8 204 58.3
Haze_26037 Corylus avellana HOM05D000173 ORTHO05D000316 7.7e-59 231.5 202 61.4
SMO364G0522 Selaginella moellendorffii HOM05D005557 ORTHO05D006748 3.3e-57 226.1 233 49.8
AagrBONN_evm.TU.Sc2ySwM_228.5739 Anthoceros agrestis HOM05D005557 ORTHO05D006748 1.1e-41 174.5 187 51.3
AUR62025296 Chenopodium quinoa HOM05D005557 ORTHO05D006748 3.3e-41 172.9 109 71.6
SHI52085 Sapria himalayana HOM05D005557 ORTHO05D006748 1.1e-39 167.9 136 62.5
PSO724G0807 Papaver somniferum HOM05D005557 ORTHO05D006748 3.9e-34 149.4 152 52.0
CBR_g19881 Chara braunii HOM05D005557 ORTHO05D006748 4.3e-33 146.0 161 45.3
arahy.Tifrunner.gnm1.ann1.CV9S7K Arachis hypogaea HOM05D005557 ORTHO05D006748 3.6e-32 142.9 83 78.3
arahy.Tifrunner.gnm1.ann1.56M64E Arachis hypogaea HOM05D005557 ORTHO05D006748 4.7e-32 142.5 83 79.5
PRCOL_00004586 Prasinoderma coloniale HOM05D005557 ORTHO05D006748 4.1e-28 129.4 186 35.5
arahy.Tifrunner.gnm1.ann1.D619LQ Arachis hypogaea HOM05D005557 ORTHO05D006748 1.0e-26 124.8 128 51.6
AagrBONN_evm.TU.Sc2ySwM_228.4614 Anthoceros agrestis HOM05D005557 ORTHO05D006748 2.3e-26 123.6 125 51.2
arahy.Tifrunner.gnm1.ann1.WCQ4SR Arachis hypogaea HOM05D005557 ORTHO05D006748 3.0e-26 123.2 87 66.7
arahy.Tifrunner.gnm1.ann1.67TMSF Arachis hypogaea HOM05D005557 ORTHO05D006748 3.3e-25 119.8 68 79.4
Cre06.g269550 Chlamydomonas reinhardtii HOM05D005557 ORTHO05D006748 8.9e-23 111.7 143 39.9
MCO02G393 Micromonas commoda HOM05D005557 ORTHO05D006748 6.4e-21 105.5 205 30.2
arahy.Tifrunner.gnm1.ann1.L7J4LP Arachis hypogaea HOM05D005557 ORTHO05D006748 8.1e-16 88.6 110 47.3
Nn1g06537 Nelumbo nucifera HOM05D005557 ORTHO05D006748 4.4e-14 82.8 83 56.6
Migut.J00920 Erythranthe guttata HOM05D005557 ORTHO05D006748 4.2e-12 76.3 74 59.5
C09p50170 Brassica napus HOM05D002376 ORTHO05D004654 1.2e-11 74.7 74 59.5
arahy.Tifrunner.gnm1.ann1.HVCV5S Arachis hypogaea HOM05D004618 ORTHO05D005318 1.7e-10 70.9 83 47.0
Migut.J00958 Erythranthe guttata HOM05D005557 ORTHO05D006748 4.3e-09 66.2 69 58.0
BraA07t29264Z Brassica rapa HOM05D005557 ORTHO05D027294 9.6e-09 65.1 60 61.7
arahy.Tifrunner.gnm1.ann1.B62L7G Arachis hypogaea HOM05D000992 ORTHO05D001928 2.1e-08 63.9 31 87.1
BolC9t57447H Brassica oleracea HOM05D042334 ORTHO05D027294 8.1e-08 62.0 59 59.3
MBI13_g00695_MAGBIO Magnolia biondii HOM05D005557 ORTHO05D006748 9.0e-07 58.5 122 35.2
arahy.Tifrunner.gnm1.ann1.KDZ9D9 Arachis hypogaea HOM05D005557 ORTHO05D001928 2.0e-06 57.4 28 85.7


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