Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaB03g12740 Brassica carinata HOM05D002651 ORTHO05D002841 3.6e-111 404.8 192 100.0
Sp7g30060 Schrenkiella parvula HOM05D002651 ORTHO05D002841 4.3e-56 221.9 184 66.3
BcaC09g52012 Brassica carinata HOM05D002651 ORTHO05D002841 7.2e-51 204.5 191 59.7
C07p59170 Brassica napus HOM05D002651 ORTHO05D002841 2.1e-50 203.0 153 72.5
BolC1t00662H Brassica oleracea HOM05D002651 ORTHO05D002841 2.1e-50 203.0 191 59.2
C01p06690 Brassica napus HOM05D002651 ORTHO05D002841 6.1e-50 201.4 191 59.2
BraA01t00571Z Brassica rapa HOM05D002651 ORTHO05D002841 6.1e-50 201.4 181 62.4
A03p61320 Brassica napus HOM05D002651 ORTHO05D002841 7.9e-50 201.1 195 61.5
BraA03t15176Z Brassica rapa HOM05D002651 ORTHO05D002841 7.9e-50 201.1 197 61.4
BcaNung05977 Brassica carinata HOM05D002651 ORTHO05D002841 1.4e-49 200.3 183 65.0
BcaNung03582 Brassica carinata HOM05D002651 ORTHO05D002841 1.3e-47 193.7 178 63.5
BolC7t46365H Brassica oleracea HOM05D002651 ORTHO05D002841 1.3e-47 193.7 178 63.5
A01p06080 Brassica napus HOM05D002651 ORTHO05D002841 9.1e-46 187.6 206 54.9
Thhalv10026043m.g Eutrema salsugineum HOM05D002651 ORTHO05D002841 2.0e-45 186.4 186 62.9
AT4G32295 Arabidopsis thaliana HOM05D002651 ORTHO05D002841 4.8e-39 165.2 177 59.9
CARHR240200 Cardamine hirsuta HOM05D002651 ORTHO05D002841 3.1e-38 162.5 179 59.8
Carub.0007s0828 Capsella rubella HOM05D002651 ORTHO05D002841 3.2e-35 152.5 189 52.9
AL7G19540 Arabidopsis lyrata HOM05D002651 ORTHO05D002841 5.5e-35 151.8 158 62.7
THA.LOC104803655 Tarenaya hassleriana HOM05D002651 ORTHO05D002841 2.8e-31 139.4 172 51.2
Cpa.g.sc954.3 Carica papaya HOM05D002651 ORTHO05D002841 2.5e-11 73.2 110 43.6
Manes.03G014300 Manihot esculenta HOM05D002651 ORTHO05D002841 4.7e-10 68.9 79 53.2
Manes.03G014400 Manihot esculenta HOM05D002651 ORTHO05D002841 4.7e-10 68.9 79 53.2
Dinv30134 Davidia involucrata HOM05D002651 ORTHO05D002841 6.1e-10 68.6 129 38.0
PSO170G1980 Papaver somniferum HOM05D002651 ORTHO05D002841 6.1e-10 68.6 67 59.7
SGA_v2.0_scaffold64G21935 Striga asiatica HOM05D002651 ORTHO05D002841 6.1e-10 68.6 99 46.5
Ciclev10008661m.g Citrus clementina HOM05D002651 ORTHO05D002841 1.0e-09 67.8 191 34.0
Dinv08646 Davidia involucrata HOM05D002651 ORTHO05D002841 1.0e-09 67.8 86 46.5
Cc08_g00600 Coffea canephora HOM05D002651 ORTHO05D002841 1.8e-09 67.0 70 54.3
MBI04_g29337_MAGBIO Magnolia biondii HOM05D002651 ORTHO05D002841 1.8e-09 67.0 47 70.2
PSO017G0463 Papaver somniferum HOM05D002651 ORTHO05D002841 1.8e-09 67.0 64 60.9
Ah.10g035900 Amaranthus hybridus HOM05D002651 ORTHO05D002841 2.3e-09 66.6 140 37.1
PGR044G1682 Punica granatum HOM05D002651 ORTHO05D002841 2.3e-09 66.6 132 41.7
DCAR_001510 Daucus carota HOM05D002651 ORTHO05D002841 3.1e-09 66.2 56 66.1
CANSAT25G0322 Cannabis sativa HOM05D002651 ORTHO05D002841 4.0e-09 65.9 127 37.8
Thecc.09G024600 Theobroma cacao HOM05D002651 ORTHO05D002841 5.2e-09 65.5 78 50.0
Gohir.D06G100366 Gossypium hirsutum HOM05D002651 ORTHO05D002841 6.8e-09 65.1 199 29.6
SalBow4G0028 Salvia bowleyana HOM05D002651 ORTHO05D002841 6.8e-09 65.1 55 63.6
ECA246G1383 Erigeron canadensis HOM05D002651 ORTHO05D002841 1.2e-08 64.3 140 34.3
Sed0015450 Sechium edule HOM05D002651 ORTHO05D002841 1.2e-08 64.3 65 58.5
Actinidia13233 Actinidia chinensis HOM05D002651 ORTHO05D002841 1.5e-08 63.9 88 43.2
Oeu029171.1 Olea europaea HOM05D002651 ORTHO05D002841 2.0e-08 63.5 135 37.0
Sc09g0008240 Simmondsia chinensis HOM05D002651 ORTHO05D002841 2.0e-08 63.5 84 45.2
Ah.16g104400 Amaranthus hybridus HOM05D002651 ORTHO05D002841 2.6e-08 63.2 127 37.0
Lsat_1_v5_gn_8_62201 Lactuca sativa HOM05D002651 ORTHO05D002841 2.6e-08 63.2 144 36.8
MBI01_g20903_MAGBIO Magnolia biondii HOM05D002651 ORTHO05D002841 2.6e-08 63.2 46 65.2
MD00G1144400 Malus domestica HOM05D002651 ORTHO05D002841 2.6e-08 63.2 55 63.6
Actinidia22343 Actinidia chinensis HOM05D002651 ORTHO05D002841 3.4e-08 62.8 51 62.7
CSS0024589 Camellia sinensis var. sinensis HOM05D002651 ORTHO05D002841 4.4e-08 62.4 90 44.4
FvH4_2g29010 Fragaria vesca HOM05D002651 ORTHO05D002841 4.4e-08 62.4 116 38.8
FAN15G3098 Fragaria x ananassa HOM05D002651 ORTHO05D002841 4.4e-08 62.4 116 38.8
FAN24G0990 Fragaria x ananassa HOM05D002651 ORTHO05D002841 4.4e-08 62.4 116 38.8
FAN27G0660 Fragaria x ananassa HOM05D002651 ORTHO05D002841 4.4e-08 62.4 116 38.8
Gorai.010G115300 Gossypium raimondii HOM05D002651 ORTHO05D002841 4.4e-08 62.4 63 55.6
HanXRQChr12g0356701 Helianthus annuus HOM05D002651 ORTHO05D002841 4.4e-08 62.4 120 38.3
QL02p021642 Quercus lobata HOM05D002651 ORTHO05D002841 4.4e-08 62.4 43 72.1
Migut.A00041 Erythranthe guttata HOM05D002651 ORTHO05D002841 5.8e-08 62.0 152 33.6
Manes.16G122300 Manihot esculenta HOM05D002651 ORTHO05D002841 5.8e-08 62.0 50 66.0
Atru.chr7.1120 Acer truncatum HOM05D002651 ORTHO05D002841 7.5e-08 61.6 137 35.0
CAN.G610.51 Capsicum annuum HOM05D002651 ORTHO05D002841 7.5e-08 61.6 62 48.4
AUR62012399 Chenopodium quinoa HOM05D002651 ORTHO05D002841 7.5e-08 61.6 115 40.9
Potri.018G027100 Populus trichocarpa HOM05D002651 ORTHO05D002841 7.5e-08 61.6 60 60.0
Nn8g39493 Nelumbo nucifera HOM05D002651 ORTHO05D002841 9.8e-08 61.2 44 65.9
RcHm_v2.0_Chr6g0297891 Rosa chinensis HOM05D002651 ORTHO05D002841 9.8e-08 61.2 136 38.2
CiPaw.08G011100 Carya illinoinensis HOM05D002651 ORTHO05D002841 1.3e-07 60.8 33 81.8
AUR62031506 Chenopodium quinoa HOM05D002651 ORTHO05D002841 1.3e-07 60.8 115 40.0
Hma1.2p1_0007F.1_g005330 Hydrangea macrophylla HOM05D002651 ORTHO05D002841 1.3e-07 60.8 56 58.9
Peaxi162Scf00891g00127 Petunia axillaris HOM05D002651 ORTHO05D002841 1.3e-07 60.8 130 36.9
TAR383G0556 Trochodendron aralioides HOM05D002651 ORTHO05D002841 1.3e-07 60.8 69 52.2
ClCG08G013390 Citrullus lanatus HOM05D002651 ORTHO05D002841 1.7e-07 60.5 68 54.4
FAN20G1883 Fragaria x ananassa HOM05D002651 ORTHO05D002841 1.7e-07 60.5 114 38.6
Gohir.A06G098300 Gossypium hirsutum HOM05D002651 ORTHO05D002841 1.7e-07 60.5 39 69.2
Sabra06G0199000 Salix brachista HOM05D002651 ORTHO05D002841 1.7e-07 60.5 56 62.5
Ah.14g079770 Amaranthus hybridus HOM05D002651 ORTHO05D002841 2.2e-07 60.1 155 34.8
Cfa013143 Carpinus fangiana HOM05D002651 ORTHO05D002841 2.2e-07 60.1 32 87.5
COL.COLO4_18861 Corchorus olitorius HOM05D002651 ORTHO05D002841 2.2e-07 60.1 104 42.3
Nitab4.5_0000028g0130 Nicotiana tabacum HOM05D002651 ORTHO05D002841 2.2e-07 60.1 129 37.2
PGSC0003DMG400030900 Solanum tuberosum HOM05D002651 ORTHO05D002841 2.2e-07 60.1 128 35.9
TWI34G0613 Tripterygium wilfordii HOM05D002651 ORTHO05D002841 2.9e-07 59.7 67 52.2
MELO3C011264.2 Cucumis melo HOM05D002651 ORTHO05D002841 3.7e-07 59.3 58 58.6
Gohir.A07G028300 Gossypium hirsutum HOM05D002651 ORTHO05D002841 3.7e-07 59.3 104 35.6
CsaV3_2G032130 Cucumis sativus L. HOM05D002651 ORTHO05D002841 4.9e-07 58.9 58 58.6
unitig_748.g7558 Utricularia gibba HOM05D002651 ORTHO05D002841 4.9e-07 58.9 107 38.3
GSVIVG01035861001 Vitis vinifera HOM05D002651 ORTHO05D002841 4.9e-07 58.9 51 60.8
CsaV3_3G046400 Cucumis sativus L. HOM05D002651 ORTHO05D002841 6.4e-07 58.5 81 40.7
ECA234G3880 Erigeron canadensis HOM05D002651 ORTHO05D002841 6.4e-07 58.5 65 52.3
Prupe.1G481300 Prunus persica HOM05D002651 ORTHO05D002841 6.4e-07 58.5 55 60.0
SalBow6G2911 Salvia bowleyana HOM05D002651 ORTHO05D002841 6.4e-07 58.5 123 39.0
TWI63G1496 Tripterygium wilfordii HOM05D002651 ORTHO05D002841 6.4e-07 58.5 67 52.2
AUR62011156 Chenopodium quinoa HOM05D002651 ORTHO05D002841 8.3e-07 58.2 101 39.6
HanXRQChr10g0315701 Helianthus annuus HOM05D002651 ORTHO05D002841 8.3e-07 58.2 87 40.2
Duzib187G1449 Durio zibethinus HOM05D002651 ORTHO05D002841 1.1e-06 57.8 145 33.8
Eucgr.C02771 Eucalyptus grandis HOM05D002651 ORTHO05D002841 1.1e-06 57.8 56 60.7
Potri.006G254700 Populus trichocarpa HOM05D002651 ORTHO05D002841 1.1e-06 57.8 82 41.5
Sopen07g003970 Solanum pennellii HOM05D002651 ORTHO05D002841 1.4e-06 57.4 129 34.9
Hma1.2p1_0018F.1_g012200 Hydrangea macrophylla HOM05D002651 ORTHO05D002841 1.9e-06 57.0 129 33.3
Nitab4.5_0005540g0010 Nicotiana tabacum HOM05D002651 ORTHO05D002841 1.9e-06 57.0 88 43.2
Sed0025027 Sechium edule HOM05D002651 ORTHO05D002841 1.9e-06 57.0 79 38.0
Sc08g0006440 Simmondsia chinensis HOM05D002651 ORTHO05D002841 1.9e-06 57.0 106 36.8
EL10Ac2g04233 Beta vulgaris HOM05D002651 ORTHO05D002841 2.4e-06 56.6 108 40.7
Lsat_1_v5_gn_5_29640 Lactuca sativa HOM05D002651 ORTHO05D002841 2.4e-06 56.6 88 46.6
Rhsim03G0249800 Rhododendron simsii HOM05D002651 ORTHO05D002841 2.4e-06 56.6 92 40.2
Solyc07g008100.4 Solanum lycopersicum HOM05D002651 ORTHO05D002841 2.4e-06 56.6 129 35.7
MELO3C003699.2 Cucumis melo HOM05D002651 ORTHO05D002841 3.2e-06 56.2 81 39.5
Duzib168G0368 Durio zibethinus HOM05D002651 ORTHO05D002841 3.2e-06 56.2 116 35.3
Nitab4.5_0011210g0010 Nicotiana tabacum HOM05D002651 ORTHO05D002841 3.2e-06 56.2 32 78.1
QL02p089426 Quercus lobata HOM05D002651 ORTHO05D002841 3.2e-06 56.2 130 34.6
vmacro06143 Vaccinium macrocarpon HOM05D002651 ORTHO05D002841 3.2e-06 56.2 87 43.7
Hund09268 Selenicereus undatus HOM05D002651 ORTHO05D002841 4.1e-06 55.8 119 37.0
vmacro05177 Vaccinium macrocarpon HOM05D002651 ORTHO05D002841 4.1e-06 55.8 71 43.7
AUR62013331 Chenopodium quinoa HOM05D002651 ORTHO05D002841 5.4e-06 55.5 52 59.6
Cc06_g08230 Coffea canephora HOM05D002651 ORTHO05D002841 5.4e-06 55.5 52 57.7
HanXRQChr04g0096651 Helianthus annuus HOM05D002651 ORTHO05D002841 5.4e-06 55.5 129 34.1
Nitab4.5_0000209g0240 Nicotiana tabacum HOM05D002651 ORTHO05D002841 5.4e-06 55.5 32 78.1
Peaxi162Scf00870g00021 Petunia axillaris HOM05D002651 ORTHO05D002841 5.4e-06 55.5 94 36.2
EL10Ac8g18693 Beta vulgaris HOM05D002651 ORTHO05D002841 7.0e-06 55.1 52 57.7
Gorai.001G033800 Gossypium raimondii HOM05D002651 ORTHO05D002841 7.0e-06 55.1 51 51.0
Glyma.06G067900 Glycine max HOM05D002651 ORTHO05D002841 9.2e-06 54.7 94 37.2
Gohir.A05G053700 Gossypium hirsutum HOM05D002651 ORTHO05D002841 9.2e-06 54.7 82 45.1


User provided reference genes

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