Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaB03g12646 Brassica carinata HOM05D004507 ORTHO05D004874 1.1e-90 336.7 181 100.0
BcaB03g12647 Brassica carinata HOM05D004507 ORTHO05D004874 1.1e-90 336.7 181 100.0
A08p19250 Brassica napus HOM05D004507 ORTHO05D004874 1.7e-86 322.8 181 93.4
BraA08t33886Z Brassica rapa HOM05D004507 ORTHO05D004874 1.7e-86 322.8 181 93.4
BcaC01g01152 Brassica carinata HOM05D004507 ORTHO05D004874 1.9e-85 319.3 181 92.8
C03p88720 Brassica napus HOM05D004507 ORTHO05D004874 1.9e-85 319.3 181 92.8
BolC3t21183H Brassica oleracea HOM05D004507 ORTHO05D004874 6.1e-84 314.3 181 91.7
BcaNung02991 Brassica carinata HOM05D004507 ORTHO05D004874 1.5e-82 309.7 181 90.1
BraA01t00720Z Brassica rapa HOM05D004507 ORTHO05D004874 1.5e-82 309.7 181 91.2
A01p07760 Brassica napus HOM05D004507 ORTHO05D004874 2.0e-82 309.3 180 91.1
C01p08650 Brassica napus HOM05D004507 ORTHO05D004874 4.3e-82 308.1 180 90.6
Sp7g28290 Schrenkiella parvula HOM05D004507 ORTHO05D004874 4.3e-82 308.1 181 91.7
BcaC09g51830 Brassica carinata HOM05D004507 ORTHO05D004874 2.8e-81 305.4 181 90.1
BolC1t00847H Brassica oleracea HOM05D004507 ORTHO05D004874 2.8e-81 305.4 181 90.1
CARHR238310 Cardamine hirsuta HOM05D004507 ORTHO05D004874 1.0e-78 297.0 180 89.4
AT4G30410 Arabidopsis thaliana HOM05D004507 ORTHO05D004874 2.2e-78 295.8 182 89.0
Thhalv10026358m.g Eutrema salsugineum HOM05D004507 ORTHO05D004874 2.2e-78 295.8 182 89.0
Carub.0007s1019 Capsella rubella HOM05D004507 ORTHO05D004874 8.5e-78 293.9 182 87.4
AL7G21740 Arabidopsis lyrata HOM05D004507 ORTHO05D004874 3.2e-77 292.0 182 87.9
Aa31LG2G20120 Aethionema arabicum HOM05D004507 ORTHO05D004874 2.6e-58 229.2 185 65.9
THA.LOC104803518 Tarenaya hassleriana HOM05D004507 ORTHO05D004874 9.1e-56 220.7 180 66.7
THA.LOC104819987 Tarenaya hassleriana HOM05D004507 ORTHO05D004874 1.4e-51 206.8 185 61.6
THA.LOC104803927 Tarenaya hassleriana HOM05D004507 ORTHO05D004874 1.3e-49 200.3 185 60.0
Duzib168G0769 Durio zibethinus HOM05D004507 ORTHO05D004874 3.1e-35 152.5 191 50.8
Dinv41307 Davidia involucrata HOM05D004507 ORTHO05D004874 2.4e-32 142.9 182 50.0
COL.COLO4_24287 Corchorus olitorius HOM05D004507 ORTHO05D004874 3.2e-32 142.5 189 49.7
Manes.14G147700 Manihot esculenta HOM05D004507 ORTHO05D004874 4.1e-32 142.1 177 48.0
Thecc.09G160500 Theobroma cacao HOM05D004507 ORTHO05D004874 2.0e-31 139.8 185 48.6
Duzib150G1659 Durio zibethinus HOM05D004507 ORTHO05D004874 2.7e-31 139.4 187 48.7
Duzib187G0534 Durio zibethinus HOM05D004507 ORTHO05D004874 2.7e-31 139.4 185 49.7
Potri.006G177000 Populus trichocarpa HOM05D004507 ORTHO05D004874 1.7e-30 136.7 181 48.1
Dinv42787 Davidia involucrata HOM05D004507 ORTHO05D004874 3.0e-30 136.0 184 48.4
Dinv43314 Davidia involucrata HOM05D004507 ORTHO05D004874 3.0e-30 136.0 184 48.4
Ciclev10009640m.g Citrus clementina HOM05D004507 ORTHO05D004874 6.6e-30 134.8 181 45.3
Sed0006958 Sechium edule HOM05D004507 ORTHO05D004874 3.3e-29 132.5 177 45.2
Cpa.g.sc75.20 Carica papaya HOM05D004507 ORTHO05D004874 9.5e-29 131.0 190 47.4
Gohir.D08G097200 Gossypium hirsutum HOM05D004507 ORTHO05D004874 1.6e-28 130.2 185 47.6
Potri.018G099100 Populus trichocarpa HOM05D004507 ORTHO05D004874 1.6e-28 130.2 183 46.4
Sabra06G0135200 Salix brachista HOM05D004507 ORTHO05D004874 1.6e-28 130.2 181 46.4
Haze_22171 Corylus avellana HOM05D004507 ORTHO05D004874 2.8e-28 129.4 178 48.3
Gorai.004G104000 Gossypium raimondii HOM05D004507 ORTHO05D004874 4.7e-28 128.6 185 47.0
Prupe.1G097600 Prunus persica HOM05D004507 ORTHO05D004874 4.7e-28 128.6 181 41.4
Atru.chr7.491 Acer truncatum HOM05D004507 ORTHO05D004874 6.2e-28 128.3 189 45.5
Cfa013550 Carpinus fangiana HOM05D004507 ORTHO05D004874 8.0e-28 127.9 182 47.3
TWI34G1692 Tripterygium wilfordii HOM05D004507 ORTHO05D004874 1.1e-27 127.5 188 44.1
TAR626G0275 Trochodendron aralioides HOM05D004507 ORTHO05D004874 1.4e-27 127.1 183 47.0
CiPaw.07G186500 Carya illinoinensis HOM05D004507 ORTHO05D004874 1.8e-27 126.7 189 46.0
Aqoxy7G03243 Aquilegia oxysepala HOM05D004507 ORTHO05D004874 2.3e-27 126.3 184 42.9
Gorai.004G273100 Gossypium raimondii HOM05D004507 ORTHO05D004874 1.5e-26 123.6 179 45.8
TAR625G0362 Trochodendron aralioides HOM05D004507 ORTHO05D004874 1.5e-26 123.6 176 44.3
Gohir.A08G235500 Gossypium hirsutum HOM05D004507 ORTHO05D004874 2.0e-26 123.2 174 48.3
Migut.K00276 Erythranthe guttata HOM05D004507 ORTHO05D004874 3.4e-26 122.5 180 44.4
TAR636G1916 Trochodendron aralioides HOM05D004507 ORTHO05D004874 3.4e-26 122.5 181 44.8
Nitab4.5_0002587g0090 Nicotiana tabacum HOM05D004507 ORTHO05D004874 4.4e-26 122.1 186 42.5
MELO3C010170.2 Cucumis melo HOM05D004507 ORTHO05D004874 7.5e-26 121.3 181 42.0
Gohir.D08G255900 Gossypium hirsutum HOM05D004507 ORTHO05D004874 7.5e-26 121.3 179 45.3
Nn8g40236 Nelumbo nucifera HOM05D004507 ORTHO05D004874 9.8e-26 120.9 184 44.6
Sabra18G0085600 Salix brachista HOM05D004507 ORTHO05D004874 1.3e-25 120.6 183 45.4
Hma1.2p1_0156F.1_g068730 Hydrangea macrophylla HOM05D004507 ORTHO05D004874 2.2e-25 119.8 184 46.2
CsaV3_1G029460 Cucumis sativus L. HOM05D004507 ORTHO05D004874 2.9e-25 119.4 179 41.9
QL02p095594 Quercus lobata HOM05D004507 ORTHO05D004874 2.9e-25 119.4 190 43.2
TAR383G0901 Trochodendron aralioides HOM05D004507 ORTHO05D004874 4.9e-25 118.6 182 45.1
ClCG06G012890 Citrullus lanatus HOM05D004507 ORTHO05D004874 1.9e-24 116.7 181 42.0
Peaxi162Scf00525g00089 Petunia axillaris HOM05D004507 ORTHO05D004874 2.4e-24 116.3 183 42.6
Glyma.17G068800 Glycine max HOM05D004507 ORTHO05D004874 3.2e-24 115.9 181 42.0
Lalb_Chr13g0300541 Lupinus albus HOM05D004507 ORTHO05D004874 4.1e-24 115.5 186 42.5
TWI32G0773 Tripterygium wilfordii HOM05D004507 ORTHO05D004874 4.1e-24 115.5 187 40.1
Nitab4.5_0001427g0130 Nicotiana tabacum HOM05D004507 ORTHO05D004874 9.2e-24 114.4 204 39.7
PSO782G3560 Papaver somniferum HOM05D004507 ORTHO05D004874 9.2e-24 114.4 188 42.6
MSTRG.6179 Avicennia marina HOM05D004507 ORTHO05D004874 2.1e-23 113.2 185 42.7
EL10Ac8g18870 Beta vulgaris HOM05D004507 ORTHO05D004874 2.1e-23 113.2 201 42.3
Rhsim01G0012400 Rhododendron simsii HOM05D004507 ORTHO05D004874 2.1e-23 113.2 177 44.6
Eucgr.C00212 Eucalyptus grandis HOM05D004507 ORTHO05D004874 2.7e-23 112.8 190 42.1
CiPaw.08G040400 Carya illinoinensis HOM05D004507 ORTHO05D004874 6.0e-23 111.7 181 41.4
PGR142G2563 Punica granatum HOM05D004507 ORTHO05D004874 1.0e-22 110.9 183 39.3
PGSC0003DMG400011171 Solanum tuberosum HOM05D004507 ORTHO05D004874 1.0e-22 110.9 188 39.4
Nitab4.5_0007380g0020 Nicotiana tabacum HOM05D004507 ORTHO05D004874 3.0e-22 109.4 188 41.0
Nn2g12545 Nelumbo nucifera HOM05D004507 ORTHO05D004874 3.9e-22 109.0 177 42.9
Sed0016542 Sechium edule HOM05D004507 ORTHO05D004874 3.9e-22 109.0 183 40.4
Lj4g0026981 Lotus japonicus HOM05D004507 ORTHO05D004874 1.1e-21 107.5 184 41.8
Sopen07g002400 Solanum pennellii HOM05D004507 ORTHO05D004874 1.1e-21 107.5 186 40.9
TPR.G5348 Trifolium pratense HOM05D004507 ORTHO05D004874 1.1e-21 107.5 181 38.7
Oeu045661.2 Olea europaea HOM05D004507 ORTHO05D004874 1.9e-21 106.7 186 44.6
ECA240G1410 Erigeron canadensis HOM05D004507 ORTHO05D004874 2.5e-21 106.3 188 41.0
MSTRG.19674 Avicennia marina HOM05D004507 ORTHO05D004874 4.3e-21 105.5 183 41.0
VMungo1215G3417 Vigna mungo HOM05D004507 ORTHO05D004874 4.3e-21 105.5 181 39.8
Glyma.13G091500 Glycine max HOM05D004507 ORTHO05D004874 9.5e-21 104.4 180 37.8
Psat0s1742g0040 Pisum sativum HOM05D004507 ORTHO05D004874 9.5e-21 104.4 176 38.6
DCAR_017942 Daucus carota HOM05D004507 ORTHO05D004874 2.1e-20 103.2 190 37.4
MSTRG.10721 Avicennia marina HOM05D004507 ORTHO05D004874 2.8e-20 102.8 171 41.5
ECA234G3792 Erigeron canadensis HOM05D004507 ORTHO05D004874 2.8e-20 102.8 188 36.7
SGA_v2.0_scaffold69G23313 Striga asiatica HOM05D004507 ORTHO05D004874 2.8e-20 102.8 190 39.5
Ca_21181_v3 Cicer arietinum L. HOM05D004507 ORTHO05D004874 3.6e-20 102.4 177 39.0
Lsat_1_v5_gn_5_87560 Lactuca sativa HOM05D004507 ORTHO05D004874 1.8e-19 100.1 186 37.6
Medtr4g129560 Medicago truncatula HOM05D004507 ORTHO05D004874 1.8e-19 100.1 187 39.0
CsaV3_2G007890 Cucumis sativus L. HOM05D004507 ORTHO05D004874 3.1e-19 99.4 178 40.4
SGA_v2.0_scaffold66G22517 Striga asiatica HOM05D004507 ORTHO05D004874 4.0e-19 99.0 181 41.4
Carub.0008s1829 Capsella rubella HOM05D004507 ORTHO05D004874 5.2e-19 98.6 166 38.0
Phvul.003G151300 Phaseolus vulgaris HOM05D004507 ORTHO05D004874 5.2e-19 98.6 178 38.8
Lsat_1_v5_gn_8_64381 Lactuca sativa HOM05D004507 ORTHO05D004874 6.8e-19 98.2 188 37.8
MELO3C004096.2 Cucumis melo HOM05D004507 ORTHO05D004874 8.9e-19 97.8 177 37.9
Lalb_Chr12g0199041 Lupinus albus HOM05D004507 ORTHO05D004874 1.2e-18 97.4 187 36.9
CSS0033256 Camellia sinensis var. sinensis HOM05D004507 ORTHO05D004874 2.6e-18 96.3 148 46.6
Lsat_1_v5_gn_7_51920 Lactuca sativa HOM05D004507 ORTHO05D004874 7.5e-18 94.7 188 39.4
THA.LOC104817812 Tarenaya hassleriana HOM05D004507 ORTHO05D004874 7.5e-18 94.7 172 37.8
HanXRQChr10g0306471 Helianthus annuus HOM05D004507 ORTHO05D004874 9.9e-18 94.4 183 37.2
CARHR271510 Cardamine hirsuta HOM05D004507 ORTHO05D004874 1.7e-17 93.6 171 36.3
BcaB08g36143 Brassica carinata HOM05D004507 ORTHO05D004874 6.4e-17 91.7 175 37.7
MD13G1260000 Malus domestica HOM05D004507 ORTHO05D004874 8.3e-17 91.3 161 40.4
MD16G1262200 Malus domestica HOM05D004507 ORTHO05D004874 1.9e-16 90.1 160 42.5
Sed0015365 Sechium edule HOM05D004507 ORTHO05D004874 1.9e-16 90.1 168 39.3
BcaC04g19929 Brassica carinata HOM05D004507 ORTHO05D004874 2.4e-16 89.7 171 37.4
BolC9t57818H Brassica oleracea HOM05D004507 ORTHO05D004874 2.4e-16 89.7 171 37.4
A10p15150 Brassica napus HOM05D004507 ORTHO05D004874 3.2e-16 89.4 171 36.8
BraA10t43598Z Brassica rapa HOM05D004507 ORTHO05D004874 3.2e-16 89.4 171 36.8
MBI15_g25682_MAGBIO Magnolia biondii HOM05D004507 ORTHO05D004874 4.1e-16 89.0 183 39.3
Oeu031854.1 Olea europaea HOM05D004507 ORTHO05D004874 4.1e-16 89.0 157 44.6
AT5G57780 Arabidopsis thaliana HOM05D004507 ORTHO05D004874 5.4e-16 88.6 171 36.8
Sed0016375 Sechium edule HOM05D004507 ORTHO05D004874 7.1e-16 88.2 180 33.3
AUR62039753 Chenopodium quinoa HOM05D004507 ORTHO05D004874 9.2e-16 87.8 148 42.6
Lalb_Chr07g0180071 Lupinus albus HOM05D004507 ORTHO05D004874 9.2e-16 87.8 186 34.9
C09p49660 Brassica napus HOM05D004507 ORTHO05D004874 2.1e-15 86.7 171 36.3
HanXRQChr09g0245171 Helianthus annuus HOM05D004507 ORTHO05D004874 2.1e-15 86.7 159 42.1
arahy.Tifrunner.gnm1.ann1.RZ4SGF Arachis hypogaea HOM05D004507 ORTHO05D004874 4.6e-15 85.5 176 36.4
Thhalv10014877m.g Eutrema salsugineum HOM05D004507 ORTHO05D004874 4.6e-15 85.5 172 37.2
HanXRQChr03g0066301 Helianthus annuus HOM05D004507 ORTHO05D004874 6.0e-15 85.1 160 41.2
AL8G33810 Arabidopsis lyrata HOM05D004507 ORTHO05D004874 1.3e-14 84.0 171 35.1
arahy.Tifrunner.gnm1.ann1.40EERC Arachis hypogaea HOM05D004507 ORTHO05D004874 1.3e-14 84.0 176 35.8
AUR62028409 Chenopodium quinoa HOM05D004507 ORTHO05D004874 2.3e-14 83.2 149 39.6
CDE05G1486 Ceratophyllum demersum HOM05D004507 ORTHO05D004874 5.1e-14 82.0 170 37.1
HanXRQChr12g0358031 Helianthus annuus HOM05D004507 ORTHO05D004874 1.5e-13 80.5 149 38.9
unitig_62.g23492 Utricularia gibba HOM05D004507 ORTHO05D004874 1.9e-13 80.1 170 32.9
MBI14_g08083_MAGBIO Magnolia biondii HOM05D004507 ORTHO05D004874 5.6e-13 78.6 151 39.7
Sp6g19460 Schrenkiella parvula HOM05D004507 ORTHO05D004874 5.6e-13 78.6 165 34.5
ClCG11G012600 Citrullus lanatus HOM05D004507 ORTHO05D004874 9.6e-13 77.8 133 38.3
ATR0580G302 Amborella trichopoda HOM05D004507 ORTHO05D004874 1.2e-12 77.4 183 37.7
CDE02G1288 Ceratophyllum demersum HOM05D004507 ORTHO05D004874 1.2e-12 77.4 154 38.3
GSVIVG01023743001 Vitis vinifera HOM05D004507 ORTHO05D004874 6.2e-12 75.1 95 46.3
Os02g0178700 Oryza sativa ssp. japonica HOM05D004507 ORTHO05D004874 3.1e-11 72.8 176 32.4
Cc06_g14060 Coffea canephora HOM05D004507 ORTHO05D004874 2.0e-10 70.1 119 39.5
CANSAT11G0203 Cannabis sativa HOM05D004507 ORTHO05D004874 5.8e-10 68.6 186 31.7
Zm00001eb389070 Zea mays HOM05D004507 ORTHO05D004874 1.7e-09 67.0 174 31.0
Zm00001eb412560 Zea mays HOM05D004507 ORTHO05D004874 2.9e-09 66.2 190 31.6
SHI49167 Sapria himalayana HOM05D004507 ORTHO05D004874 4.9e-09 65.5 181 33.7
SalBow1G3357 Salvia bowleyana HOM05D004507 ORTHO05D004874 2.4e-08 63.2 93 39.8
Os02g0791300 Oryza sativa ssp. japonica HOM05D004507 ORTHO05D004874 2.3e-06 56.6 174 30.5
SMO144G0179 Selaginella moellendorffii HOM05D026704 ORTHO05D030102 3.0e-06 56.2 150 27.3
CARHR138130 Cardamine hirsuta HOM05D005211 ORTHO05D006148 6.6e-06 55.1 142 34.5
SEGI_09603 Sequoiadendron giganteum HOM05D001624 ORTHO05D008636 6.6e-06 55.1 146 32.9
SEGI_25117 Sequoiadendron giganteum HOM05D016169 ORTHO05D004874 6.6e-06 55.1 197 30.5


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