Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaB03g12610 Brassica carinata HOM05D004932 ORTHO05D005622 9.4e-154 547.0 307 100.0
A08p19620 Brassica napus HOM05D004932 ORTHO05D005622 5.0e-139 498.0 308 89.9
BolC3t21234H Brassica oleracea HOM05D004932 ORTHO05D005622 2.5e-138 495.7 308 89.9
BraA08t33920Z Brassica rapa HOM05D004932 ORTHO05D005622 2.5e-138 495.7 308 89.6
C03p89240 Brassica napus HOM05D004932 ORTHO05D005622 4.3e-138 495.0 308 89.9
BcaC01g01175 Brassica carinata HOM05D004932 ORTHO05D005622 3.0e-136 488.8 311 88.7
A01p08520 Brassica napus HOM05D004932 ORTHO05D005622 1.8e-128 463.0 313 81.5
C01p09950 Brassica napus HOM05D004932 ORTHO05D005622 2.6e-127 459.1 311 83.6
BolC1t00957H Brassica oleracea HOM05D004932 ORTHO05D005622 2.6e-127 459.1 311 83.6
BraA01t00801Z Brassica rapa HOM05D004932 ORTHO05D005622 2.9e-126 455.7 319 80.3
BcaC09g51740 Brassica carinata HOM05D004932 ORTHO05D005622 1.1e-125 453.8 311 82.6
Sp7g27380 Schrenkiella parvula HOM05D004932 ORTHO05D005622 1.5e-122 443.4 312 84.6
Thhalv10025804m.g Eutrema salsugineum HOM05D004932 ORTHO05D005622 2.6e-119 432.6 311 76.8
AT4G29520 Arabidopsis thaliana HOM05D004932 ORTHO05D005622 6.4e-118 427.9 312 80.4
AL7G22880 Arabidopsis lyrata HOM05D004932 ORTHO05D005622 2.7e-116 422.5 312 79.8
Carub.0007s1103 Capsella rubella HOM05D004932 ORTHO05D005622 6.6e-115 417.9 312 78.2
CARHR237350 Cardamine hirsuta HOM05D004932 ORTHO05D005622 6.6e-115 417.9 312 80.4
THA.LOC104814605 Tarenaya hassleriana HOM05D004932 ORTHO05D005622 4.1e-109 398.7 310 72.3
Aa31LG2G20960 Aethionema arabicum HOM05D004932 ORTHO05D005622 2.6e-103 379.4 314 73.2
Duzib168G1170 Durio zibethinus HOM05D004932 ORTHO05D005622 1.7e-91 340.1 302 63.2
Gohir.D07G010400 Gossypium hirsutum HOM05D004932 ORTHO05D005622 2.3e-91 339.7 306 61.8
Gorai.001G010800 Gossypium raimondii HOM05D004932 ORTHO05D005622 2.3e-91 339.7 306 61.8
Gohir.A07G010100 Gossypium hirsutum HOM05D004932 ORTHO05D005622 3.0e-91 339.3 306 61.8
Duzib150G0148 Durio zibethinus HOM05D004932 ORTHO05D005622 4.3e-90 335.5 307 60.9
SalBow1G2721 Salvia bowleyana HOM05D004932 ORTHO05D005622 5.6e-90 335.1 307 59.6
Thecc.09G093000 Theobroma cacao HOM05D004932 ORTHO05D005622 3.6e-89 332.4 307 61.9
Eucgr.C00917 Eucalyptus grandis HOM05D004932 ORTHO05D005622 4.0e-88 328.9 305 60.0
MSTRG.10579 Avicennia marina HOM05D004932 ORTHO05D005622 3.4e-87 325.9 311 59.5
Manes.14G155500 Manihot esculenta HOM05D004932 ORTHO05D005622 5.8e-87 325.1 308 59.4
CANSAT56G0365 Cannabis sativa HOM05D004932 ORTHO05D005622 9.9e-87 324.3 305 61.3
PGSC0003DMG400008434 Solanum tuberosum HOM05D004932 ORTHO05D005622 1.3e-86 323.9 289 61.2
Actinidia29889 Actinidia chinensis HOM05D004932 ORTHO05D005622 2.2e-86 323.2 308 59.7
PGR142G3354 Punica granatum HOM05D004932 ORTHO05D005622 2.9e-86 322.8 306 60.5
Lalb_Chr24g0393881 Lupinus albus HOM05D004932 ORTHO05D005622 4.9e-86 322.0 308 61.0
MELO3C015448.2 Cucumis melo HOM05D004932 ORTHO05D005622 6.4e-86 321.6 306 62.4
CsaV3_1G040210 Cucumis sativus L. HOM05D004932 ORTHO05D005622 1.4e-85 320.5 310 62.3
CsaV3_UNG060480 Cucumis sativus L. HOM05D004932 ORTHO05D005622 1.4e-85 320.5 310 62.3
Atru.chr7.1544 Acer truncatum HOM05D004932 ORTHO05D005622 2.4e-85 319.7 310 62.3
Hma1.2p1_0798F.1_g219580 Hydrangea macrophylla HOM05D004932 ORTHO05D005622 3.2e-85 319.3 310 57.7
Lj2g0005770 Lotus japonicus HOM05D004932 ORTHO05D005622 4.2e-85 318.9 311 60.1
Solyc07g032250.4 Solanum lycopersicum HOM05D004932 ORTHO05D005622 4.2e-85 318.9 307 59.9
Sopen07g015910 Solanum pennellii HOM05D004932 ORTHO05D005622 1.6e-84 317.0 307 59.9
TWI63G1476 Tripterygium wilfordii HOM05D004932 ORTHO05D005622 4.6e-84 315.5 309 58.9
arahy.Tifrunner.gnm1.ann1.NAI4LE Arachis hypogaea HOM05D004932 ORTHO05D005622 6.0e-84 315.1 308 61.4
Dinv42295 Davidia involucrata HOM05D004932 ORTHO05D005622 1.0e-83 314.3 311 56.6
Medtr6g091780 Medicago truncatula HOM05D004932 ORTHO05D005622 1.8e-83 313.5 308 60.1
arahy.Tifrunner.gnm1.ann1.RRYY0T Arachis hypogaea HOM05D004932 ORTHO05D005622 2.3e-83 313.2 309 61.8
FvH4_1g07000 Fragaria vesca HOM05D004932 ORTHO05D005622 3.0e-83 312.8 308 56.5
FAN26G1352 Fragaria x ananassa HOM05D004932 ORTHO05D005622 3.0e-83 312.8 308 58.4
FAN26G3436 Fragaria x ananassa HOM05D004932 ORTHO05D005622 3.0e-83 312.8 308 58.4
Glyma.07G128200 Glycine max HOM05D004932 ORTHO05D005622 3.0e-83 312.8 308 60.7
MD15G1203900 Malus domestica HOM05D004932 ORTHO05D005622 3.0e-83 312.8 311 58.8
EL10Ac8g19275 Beta vulgaris HOM05D004932 ORTHO05D005622 3.9e-83 312.4 308 58.4
GSVIVG01015235001 Vitis vinifera HOM05D004932 ORTHO05D005622 3.9e-83 312.4 310 59.0
Ca_25616_v3 Cicer arietinum L. HOM05D004932 ORTHO05D005622 6.7e-83 311.6 300 60.7
ClCG03G015800 Citrullus lanatus HOM05D004932 ORTHO05D005622 6.7e-83 311.6 306 58.2
FAN19G2121 Fragaria x ananassa HOM05D004932 ORTHO05D005622 6.7e-83 311.6 308 58.4
QL02p063162 Quercus lobata HOM05D004932 ORTHO05D005622 8.7e-83 311.2 302 61.9
FAN28G1050 Fragaria x ananassa HOM05D004932 ORTHO05D005622 1.1e-82 310.8 308 58.1
CAN.G1837.4 Capsicum annuum HOM05D004932 ORTHO05D005622 1.9e-82 310.1 289 59.2
FAN23G2709 Fragaria x ananassa HOM05D004932 ORTHO05D005622 1.9e-82 310.1 308 58.1
Potri.018G067300 Populus trichocarpa HOM05D004932 ORTHO05D005622 2.5e-82 309.7 308 59.4
Dinv36742 Davidia involucrata HOM05D004932 ORTHO05D005622 3.3e-82 309.3 311 57.6
Nitab4.5_0007297g0010 Nicotiana tabacum HOM05D004932 ORTHO05D005622 4.3e-82 308.9 305 56.7
Nitab4.5_0000713g0230 Nicotiana tabacum HOM05D004932 ORTHO05D005622 5.6e-82 308.5 305 57.4
Manes.16G104000 Manihot esculenta HOM05D004932 ORTHO05D005622 6.2e-81 305.1 311 55.6
COL.COLO4_18228 Corchorus olitorius HOM05D004932 ORTHO05D005622 5.3e-80 302.0 307 57.0
Sabra18G0059800 Salix brachista HOM05D004932 ORTHO05D005622 9.0e-80 301.2 312 58.0
Os06g0150400 Oryza sativa ssp. japonica HOM05D004932 ORTHO05D005622 2.6e-79 299.7 285 58.2
PSO210G2479 Papaver somniferum HOM05D004932 ORTHO05D005622 2.6e-79 299.7 304 55.9
Cc06_g11080 Coffea canephora HOM05D004932 ORTHO05D005622 3.4e-79 299.3 311 56.9
Lalb_Chr14g0375311 Lupinus albus HOM05D004932 ORTHO05D005622 4.5e-79 298.9 309 57.0
CiPaw.03G218800 Carya illinoinensis HOM05D004932 ORTHO05D005622 7.6e-79 298.1 304 60.5
Haze_25884 Corylus avellana HOM05D004932 ORTHO05D005622 2.2e-78 296.6 309 59.5
Sc18g0001850 Simmondsia chinensis HOM05D004932 ORTHO05D005622 2.2e-78 296.6 267 62.2
Lj7C672T15 Lonicera japonica HOM05D004932 ORTHO05D005622 3.8e-78 295.8 305 57.0
Nn6g35421 Nelumbo nucifera HOM05D004932 ORTHO05D005622 3.8e-78 295.8 307 57.7
Zm00001eb376850 Zea mays HOM05D004932 ORTHO05D005622 1.1e-77 294.3 302 55.3
MD02G1074400 Malus domestica HOM05D004932 ORTHO05D005622 1.4e-77 293.9 311 58.5
Aqoxy7G01262 Aquilegia oxysepala HOM05D004932 ORTHO05D005622 1.9e-77 293.5 311 53.7
Glyma.01G003700 Glycine max HOM05D004932 ORTHO05D005622 1.9e-77 293.5 308 57.8
Phvul.004G172100 Phaseolus vulgaris HOM05D004932 ORTHO05D005622 1.9e-77 293.5 308 59.7
VMungo0464G1844 Vigna mungo HOM05D004932 ORTHO05D005622 2.5e-77 293.1 308 58.8
TPR.G35493 Trifolium pratense HOM05D004932 ORTHO05D005622 9.3e-77 291.2 299 61.5
Prupe.7G213500 Prunus persica HOM05D004932 ORTHO05D005622 1.6e-76 290.4 306 57.8
CDE05G0556 Ceratophyllum demersum HOM05D004932 ORTHO05D005622 2.7e-76 289.7 310 55.5
Ciclev10009015m.g Citrus clementina HOM05D004932 ORTHO05D005622 3.5e-76 289.3 305 60.0
Cpa.g.sc7.248 Carica papaya HOM05D004932 ORTHO05D005622 6.0e-76 288.5 311 58.5
Oeu000325.1 Olea europaea HOM05D001440 ORTHO05D005622 6.0e-76 288.5 204 70.1
PSO210G4737 Papaver somniferum HOM05D004932 ORTHO05D005622 6.0e-76 288.5 304 56.9
ATR0789G094 Amborella trichopoda HOM05D004932 ORTHO05D005622 1.3e-75 287.3 296 49.3
RcHm_v2.0_Chr2g0092951 Rosa chinensis HOM05D004932 ORTHO05D005622 2.3e-75 286.6 311 59.2
Sed0008469 Sechium edule HOM05D004932 ORTHO05D005622 2.3e-75 286.6 239 65.3
ECA234G2984 Erigeron canadensis HOM05D004932 ORTHO05D005622 5.1e-75 285.4 266 57.5
Medtr6g090810 Medicago truncatula HOM05D004932 ORTHO05D005622 5.1e-75 285.4 308 57.5
Psat1g049760 Pisum sativum HOM05D004932 ORTHO05D005622 8.7e-75 284.6 300 57.0
Ah.09g228480 Amaranthus hybridus HOM05D004932 ORTHO05D005622 1.1e-72 277.7 309 51.5
Peaxi162Scf00444g00617 Petunia axillaris HOM05D004932 ORTHO05D005622 1.8e-72 276.9 304 51.0
AUR62031253 Chenopodium quinoa HOM05D004932 ORTHO05D005622 4.1e-72 275.8 309 50.8
HanXRQChr10g0319131 Helianthus annuus HOM05D004932 ORTHO05D005622 5.3e-72 275.4 305 54.8
vmacro06275 Vaccinium macrocarpon HOM05D004932 ORTHO05D005622 9.0e-72 274.6 311 53.7
AUR62027447 Chenopodium quinoa HOM05D004932 ORTHO05D005622 1.2e-71 274.2 309 51.5
CDE05G1139 Ceratophyllum demersum HOM05D004932 ORTHO05D005622 3.4e-71 272.7 267 56.9
SGA_v2.0_scaffold10G05207 Striga asiatica HOM05D004932 ORTHO05D005622 5.9e-71 271.9 366 49.2
CSS0009775 Camellia sinensis var. sinensis HOM05D004932 ORTHO05D005622 7.6e-71 271.6 308 55.2
Migut.K00580 Erythranthe guttata HOM05D004932 ORTHO05D005622 1.3e-70 270.8 313 55.0
Medtr6g092180 Medicago truncatula HOM05D004932 ORTHO05D005622 1.3e-70 270.8 308 55.8
DCAR_011989 Daucus carota HOM05D004932 ORTHO05D005622 6.5e-70 268.5 276 58.7
unitig_749.g14227 Utricularia gibba HOM05D004932 ORTHO05D005622 8.5e-70 268.1 269 56.5
Lsat_1_v5_gn_5_145840 Lactuca sativa HOM05D004932 ORTHO05D005622 7.2e-69 265.0 301 56.1
arahy.Tifrunner.gnm1.ann1.E8KE86 Arachis hypogaea HOM05D004932 ORTHO05D005622 1.2e-68 264.2 310 56.5
SEGI_24488 Sequoiadendron giganteum HOM05D004932 ORTHO05D005622 7.9e-68 261.5 319 46.7
arahy.Tifrunner.gnm1.ann1.XF40UC Arachis hypogaea HOM05D004932 ORTHO05D005622 1.0e-67 261.2 312 56.1
HPP92_004560 Vanilla planifolia HOM05D004932 ORTHO05D005622 1.8e-67 260.4 310 50.6
Rhsim03G0234400 Rhododendron simsii HOM05D004932 ORTHO05D005622 4.1e-64 249.2 308 51.0
TAR365G0154 Trochodendron aralioides HOM05D004932 ORTHO05D005622 1.9e-61 240.4 210 58.1
SHI02816 Sapria himalayana HOM05D004932 ORTHO05D005622 1.6e-60 237.3 231 55.4
Medtr6g092150 Medicago truncatula HOM05D004932 ORTHO05D005622 2.0e-58 230.3 314 51.6
unitig_78.g29619 Utricularia gibba HOM05D004932 ORTHO05D005622 3.3e-58 229.6 255 53.3
Mapoly0075s0048 Marchantia polymorpha HOM05D004932 ORTHO05D005622 5.7e-58 228.8 319 49.5
Pp3c4_19450 Physcomitrium patens HOM05D004932 ORTHO05D005622 8.2e-57 224.9 309 46.6
Cfa003116 Carpinus fangiana HOM05D004932 ORTHO05D005622 7.7e-55 218.4 235 58.3
AagrBONN_evm.TU.Sc2ySwM_362.2022 Anthoceros agrestis HOM05D004932 ORTHO05D005622 1.5e-50 204.1 201 53.7
arahy.Tifrunner.gnm1.ann1.GR1INA Arachis hypogaea HOM05D004932 ORTHO05D005622 3.7e-49 199.5 185 58.9
HanXRQChr12g0355371 Helianthus annuus HOM05D004932 ORTHO05D005622 1.5e-45 187.6 311 43.4
SMO361G0136 Selaginella moellendorffii HOM05D004932 ORTHO05D005622 1.8e-43 180.6 204 47.1
CBR_g8029 Chara braunii HOM05D004932 ORTHO05D005622 1.1e-40 171.4 266 40.2
arahy.Tifrunner.gnm1.ann1.Y4MEFZ Arachis hypogaea HOM05D004932 ORTHO05D005622 3.7e-33 146.4 98 73.5
Cc06_g18040 Coffea canephora HOM05D004932 ORTHO05D005622 8.5e-30 135.2 209 41.1
unitig_26.g9168 Utricularia gibba HOM05D004932 ORTHO05D005622 1.1e-29 134.8 124 60.5
MCO04G519 Micromonas commoda HOM05D004932 ORTHO05D005622 9.8e-26 121.7 195 35.9
PRCOL_00005979 Prasinoderma coloniale HOM05D004932 ORTHO05D005622 3.1e-24 116.7 220 31.4
Oeu037599.1 Olea europaea HOM05D004932 ORTHO05D005622 9.2e-24 115.2 290 37.9
Cre03.g151700 Chlamydomonas reinhardtii HOM05D004932 ORTHO05D005622 5.6e-21 105.9 218 32.6
arahy.Tifrunner.gnm1.ann1.XYZ5FS Arachis hypogaea HOM05D004932 ORTHO05D005622 1.4e-19 101.3 68 66.2
CARHR109770 Cardamine hirsuta HOM05D004932 ORTHO05D005622 1.4e-19 101.3 119 55.5
Hma1.2p1_0798F.1_g219570 Hydrangea macrophylla HOM05D004932 ORTHO05D005622 1.2e-18 98.2 140 47.9
Hma1.2p1_1074F.1_g254276 Hydrangea macrophylla HOM05D004932 ORTHO05D005622 1.2e-18 98.2 140 47.9
Hma1.2p1_1586F.1_g292210 Hydrangea macrophylla HOM05D004932 ORTHO05D005622 1.2e-18 98.2 66 66.7
RcHm_v2.0_Chr5g0016971 Rosa chinensis HOM05D004932 ORTHO05D005622 1.3e-17 94.7 64 71.9
RcHm_v2.0_Chr4g0402141 Rosa chinensis HOM05D004932 ORTHO05D005622 4.9e-17 92.8 69 68.1
Hma1.2p1_1881F.1_g306380 Hydrangea macrophylla HOM05D004932 ORTHO05D005622 1.1e-13 81.6 52 69.2
CiPaw.05G072200 Carya illinoinensis HOM05D004932 ORTHO05D005622 8.9e-11 72.0 50 66.0
Nn3g21874 Nelumbo nucifera HOM05D004932 ORTHO05D005622 3.4e-10 70.1 45 66.7
Nn2g13205 Nelumbo nucifera HOM05D004932 ORTHO05D005622 1.7e-09 67.8 61 59.0
arahy.Tifrunner.gnm1.ann1.P1T2M1 Arachis hypogaea HOM05D000368 ORTHO05D000289 1.6e-07 61.2 39 69.2
Medtr6g077350 Medicago truncatula HOM05D004932 ORTHO05D005622 3.5e-07 60.1 44 70.5


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