Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaB03g12563 Brassica carinata HOM05D005953 ORTHO05D004056 2.3e-30 135.2 81 100.0
BcaB03g12564 Brassica carinata HOM05D005953 ORTHO05D004056 2.3e-30 135.2 81 100.0
Carub.0007s1247 Capsella rubella HOM05D005953 ORTHO05D004056 4.1e-24 114.4 81 80.2
C01p24770 Brassica napus HOM05D005953 ORTHO05D004056 4.6e-23 110.9 81 84.0
BcaC07g38320 Brassica carinata HOM05D005953 ORTHO05D004056 1.0e-22 109.8 81 80.2
BolC1t02424H Brassica oleracea HOM05D005953 ORTHO05D004056 2.3e-22 108.6 81 81.5
Sp7g26250 Schrenkiella parvula HOM05D005953 ORTHO05D004056 3.0e-22 108.2 81 80.2
BraA08t33974Z Brassica rapa HOM05D005953 ORTHO05D004056 5.0e-22 107.5 81 79.0
AT4G28290 Arabidopsis thaliana HOM05D005953 ORTHO05D004056 1.9e-21 105.5 81 79.0
BcaC09g50494 Brassica carinata HOM05D005953 ORTHO05D004056 1.6e-20 102.4 81 81.5
A01p19690 Brassica napus HOM05D005953 ORTHO05D004056 1.6e-20 102.4 81 81.5
BraA01t01902Z Brassica rapa HOM05D005953 ORTHO05D004056 1.6e-20 102.4 81 81.5
C08p10750 Brassica napus HOM05D005953 ORTHO05D004056 4.7e-20 100.9 81 74.1
BolC8t48747H Brassica oleracea HOM05D005953 ORTHO05D004056 4.7e-20 100.9 81 74.1
AL7G24310 Arabidopsis lyrata HOM05D005953 ORTHO05D004056 9.8e-18 93.2 81 74.1
BcaNung01582 Brassica carinata HOM05D005953 ORTHO05D004056 9.2e-16 86.7 81 74.1
Thhalv10026705m.g Eutrema salsugineum HOM05D005953 ORTHO05D004056 1.8e-11 72.4 82 68.3
CARHR236000 Cardamine hirsuta HOM05D005953 ORTHO05D004056 2.3e-11 72.0 81 65.4
Medtr2g090340 Medicago truncatula HOM05D005953 ORTHO05D004056 1.7e-09 65.9 81 49.4
Hma1.2p1_1201F.1_g266560 Hydrangea macrophylla HOM05D005953 ORTHO05D004056 6.4e-09 63.9 82 52.4
Ca_01501_v3 Cicer arietinum L. HOM05D005953 ORTHO05D004056 1.9e-08 62.4 81 49.4
Atru.chr6.2998 Acer truncatum HOM05D005953 ORTHO05D004056 4.1e-08 61.2 81 50.6
Actinidia11037 Actinidia chinensis HOM05D005953 ORTHO05D004056 9.2e-08 60.1 81 59.3
SalBow1G2785 Salvia bowleyana HOM05D005953 ORTHO05D004056 9.2e-08 60.1 82 48.8
Migut.H01186 Erythranthe guttata HOM05D005953 ORTHO05D004056 2.1e-07 58.9 81 44.4
Lalb_Chr03g0029431 Lupinus albus HOM05D005953 ORTHO05D004056 2.1e-07 58.9 81 48.1
Sopen07g028000 Solanum pennellii HOM05D005953 ORTHO05D004056 2.1e-07 58.9 82 52.4
Ciclev10017361m.g Citrus clementina HOM05D005953 ORTHO05D004056 2.7e-07 58.5 81 44.4
Solyc07g054060.3 Solanum lycopersicum HOM05D005953 ORTHO05D004056 2.7e-07 58.5 82 52.4
Peaxi162Scf00132g00229 Petunia axillaris HOM05D005953 ORTHO05D004056 3.5e-07 58.2 81 56.8
Psat0s741g0120 Pisum sativum HOM05D005953 ORTHO05D004056 4.6e-07 57.8 81 54.3
PGSC0003DMG400018306 Solanum tuberosum HOM05D005953 ORTHO05D004056 4.6e-07 57.8 81 49.4
Gohir.A04G103800 Gossypium hirsutum HOM05D005953 ORTHO05D004056 7.8e-07 57.0 81 48.1
Gohir.D04G143500 Gossypium hirsutum HOM05D005953 ORTHO05D004056 7.8e-07 57.0 81 46.9
Gorai.012G128900 Gossypium raimondii HOM05D005953 ORTHO05D004056 7.8e-07 57.0 81 46.9
HanXRQChr17g0541941 Helianthus annuus HOM05D005953 ORTHO05D004056 1.0e-06 56.6 85 52.9
MELO3C013618.2 Cucumis melo HOM05D005953 ORTHO05D004056 1.3e-06 56.2 81 46.9
MBI06_g06482_MAGBIO Magnolia biondii HOM05D005953 ORTHO05D004056 1.3e-06 56.2 82 47.6
Thecc.02G179300 Theobroma cacao HOM05D005953 ORTHO05D004056 1.3e-06 56.2 81 45.7
Manes.12G089522 Manihot esculenta HOM05D005953 ORTHO05D004056 1.7e-06 55.8 81 53.1
HPP92_014633 Vanilla planifolia HOM05D005953 ORTHO05D004056 1.7e-06 55.8 84 50.0
MBI07_g12792_MAGBIO Magnolia biondii HOM05D005953 ORTHO05D004056 2.3e-06 55.5 83 47.0
Actinidia09855 Actinidia chinensis HOM05D005953 ORTHO05D004056 3.0e-06 55.1 81 48.1
Nitab4.5_0000512g0060 Nicotiana tabacum HOM05D005953 ORTHO05D004056 3.0e-06 55.1 81 54.3
GSVIVG01020541001 Vitis vinifera HOM05D005953 ORTHO05D004056 3.0e-06 55.1 85 44.7
QL02p049480 Quercus lobata HOM05D005953 ORTHO05D004056 3.9e-06 54.7 83 45.8
QL08p038675 Quercus lobata HOM05D005953 ORTHO05D004056 3.9e-06 54.7 83 45.8
Lalb_Chr14g0366901 Lupinus albus HOM05D005953 ORTHO05D004056 5.1e-06 54.3 86 48.8
Nn1g06570 Nelumbo nucifera HOM05D005953 ORTHO05D004056 5.1e-06 54.3 82 43.9
arahy.Tifrunner.gnm1.ann1.XD6XV6 Arachis hypogaea HOM05D005953 ORTHO05D004056 8.6e-06 53.5 85 50.6
Lsat_1_v5_gn_8_134201 Lactuca sativa HOM05D005953 ORTHO05D004056 8.6e-06 53.5 82 48.8


User provided reference genes

Program Settings