Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaB03g12380 Brassica carinata HOM05D006289 ORTHO05D092672 8.8e-125 450.3 224 100.0
BcaB06g26983 Brassica carinata HOM05D005627 ORTHO05D039808 6.7e-32 141.7 106 74.5
C05p37190 Brassica napus HOM05D005627 ORTHO05D024275 2.1e-17 93.6 134 41.8
BraA08t34504Z Brassica rapa HOM05D006289 ORTHO05D039808 6.7e-16 88.6 64 68.8
BcaB08g34566 Brassica carinata HOM05D005627 ORTHO05D009842 7.4e-15 85.1 84 51.2
BcaC04g21092 Brassica carinata HOM05D005627 ORTHO05D031749 7.4e-15 85.1 150 38.7
C09p35790 Brassica napus HOM05D005627 ORTHO05D031749 7.4e-15 85.1 150 38.7
BolC9t56413H Brassica oleracea HOM05D005627 ORTHO05D031749 7.4e-15 85.1 150 38.7
BcaC09g49023 Brassica carinata HOM05D006289 ORTHO05D018698 1.6e-14 84.0 107 47.7
BcaB01g00118 Brassica carinata HOM05D005627 ORTHO05D009842 4.8e-14 82.4 85 49.4
BcaB05g23251 Brassica carinata HOM05D005627 ORTHO05D009842 6.3e-14 82.0 85 50.6
BcaC01g03482 Brassica carinata HOM05D006289 ORTHO05D032299 8.2e-14 81.6 114 40.4
C03p52020 Brassica napus HOM05D006289 ORTHO05D032299 1.4e-13 80.9 87 47.1
BolC3t17484H Brassica oleracea HOM05D006289 ORTHO05D032299 1.4e-13 80.9 87 47.1
BraA05t20012Z Brassica rapa HOM05D005627 ORTHO05D021730 9.0e-13 78.2 104 41.3
BraA01t02126Z Brassica rapa HOM05D005627 ORTHO05D021730 1.2e-12 77.8 104 41.3
BcaB03g16259 Brassica carinata HOM05D005627 ORTHO05D021730 1.5e-12 77.4 84 46.4
BcaC05g27033 Brassica carinata HOM05D005627 ORTHO05D031886 3.4e-12 76.3 85 45.9
C05p28910 Brassica napus HOM05D005627 ORTHO05D031886 3.4e-12 76.3 85 45.9
BolC5t31612H Brassica oleracea HOM05D005627 ORTHO05D031886 3.4e-12 76.3 85 45.9
BcaC04g19885 Brassica carinata HOM05D005627 ORTHO05D017564 1.0e-11 74.7 105 41.9
A09p28380 Brassica napus HOM05D005627 ORTHO05D021730 1.3e-11 74.3 96 42.7
BraA02t08906Z Brassica rapa HOM05D005627 ORTHO05D019933 2.2e-11 73.6 104 39.4
BcaC08g47004 Brassica carinata HOM05D005627 ORTHO05D019933 2.9e-11 73.2 105 41.9
BcaB04g17888 Brassica carinata HOM05D005627 ORTHO05D017568 3.8e-11 72.8 85 41.2
BcaB04g18536 Brassica carinata HOM05D005627 ORTHO05D009842 6.5e-11 72.0 83 45.8
BcaC04g20743 Brassica carinata HOM05D006289 ORTHO05D027118 8.5e-11 71.6 89 41.6
A04p11360 Brassica napus HOM05D005627 ORTHO05D019933 8.5e-11 71.6 104 38.5
C09p39670 Brassica napus HOM05D005627 ORTHO05D021730 8.5e-11 71.6 105 41.0
BolC9t56847H Brassica oleracea HOM05D005627 ORTHO05D021730 8.5e-11 71.6 105 41.0
BraA04t16798Z Brassica rapa HOM05D005627 ORTHO05D019933 8.5e-11 71.6 104 38.5
BcaC05g27035 Brassica carinata HOM05D006289 ORTHO05D032057 1.1e-10 71.2 86 40.7
C05p28920 Brassica napus HOM05D006289 ORTHO05D032057 1.1e-10 71.2 86 40.7
BolC5t31614H Brassica oleracea HOM05D006289 ORTHO05D032057 1.1e-10 71.2 86 40.7
C09p39660 Brassica napus HOM05D006289 ORTHO05D027118 1.4e-10 70.9 89 40.4
BolC9t56845H Brassica oleracea HOM05D006289 ORTHO05D027118 1.4e-10 70.9 89 40.4
BcaB01g00831 Brassica carinata HOM05D005627 ORTHO05D009842 7.2e-10 68.6 103 36.9
A09p28360 Brassica napus HOM05D006289 ORTHO05D027118 7.2e-10 68.6 82 40.2
BcaB07g30175 Brassica carinata HOM05D005627 ORTHO05D019933 1.2e-09 67.8 120 36.7
BcaB03g16579 Brassica carinata HOM05D006289 ORTHO05D019933 1.6e-09 67.4 135 34.1
BcaB08g34781 Brassica carinata HOM05D005627 ORTHO05D009842 5.1e-08 62.4 108 35.2
BcaC05g27731 Brassica carinata HOM05D006289 ORTHO05D024275 5.1e-08 62.4 90 42.2
BcaB04g19628 Brassica carinata HOM05D005627 ORTHO05D017564 6.7e-08 62.0 131 30.5
BolC9t58083H Brassica oleracea HOM05D006289 ORTHO05D018698 6.7e-08 62.0 127 34.6
BraA05t20010Z Brassica rapa HOM05D006289 ORTHO05D028190 1.1e-07 61.2 93 35.5
C02p45490 Brassica napus HOM05D006289 ORTHO05D039115 1.5e-07 60.8 79 41.8
C02p45470 Brassica napus HOM05D006289 ORTHO05D103884 2.6e-07 60.1 101 35.6
BcaC08g46979 Brassica carinata HOM05D005627 ORTHO05D019933 3.3e-07 59.7 89 38.2
A01p24510 Brassica napus HOM05D006289 ORTHO05D016037 3.3e-07 59.7 104 31.7
BcaB08g35417 Brassica carinata HOM05D006289 ORTHO05D024275 4.4e-07 59.3 62 48.4
C09p42080 Brassica napus HOM05D006289 ORTHO05D016037 5.7e-07 58.9 103 31.1
BraA04t16495Z Brassica rapa HOM05D006289 ORTHO05D016037 5.7e-07 58.9 104 30.8
BcaB04g19296 Brassica carinata HOM05D006289 ORTHO05D017564 7.4e-07 58.5 104 33.7
BcaB01g01914 Brassica carinata HOM05D005627 ORTHO05D009842 2.2e-06 57.0 85 41.2
C03p66840 Brassica napus HOM05D006289 ORTHO05D017568 3.7e-06 56.2 93 32.3
C09p50140 Brassica napus HOM05D006289 ORTHO05D024275 3.7e-06 56.2 61 47.5
BolC3t18952H Brassica oleracea HOM05D006289 ORTHO05D017568 3.7e-06 56.2 93 32.3
C01p43410 Brassica napus HOM05D006289 ORTHO05D017568 8.2e-06 55.1 93 32.3


User provided reference genes

Program Settings