Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaB03g12152 Brassica carinata HOM05D001030 ORTHO05D092014 6.0e-45 183.7 88 100.0
BcaC01g00094 Brassica carinata HOM05D001030 ORTHO05D024412 3.0e-28 128.3 128 57.8
C07p08210 Brassica napus HOM05D001030 ORTHO05D024412 1.0e-15 86.7 69 66.7
C07p08240 Brassica napus HOM05D001030 ORTHO05D024412 1.0e-15 86.7 69 66.7
BolC7t41237H Brassica oleracea HOM05D001030 ORTHO05D024412 1.0e-15 86.7 69 66.7
BolC7t41240H Brassica oleracea HOM05D001030 ORTHO05D024412 1.0e-15 86.7 69 66.7
BcaB06g25939 Brassica carinata HOM05D001030 ORTHO05D003090 2.0e-08 62.4 63 50.8
BcaC05g28562 Brassica carinata HOM05D001030 ORTHO05D003090 1.7e-07 59.3 63 47.6
A05p30710 Brassica napus HOM05D001030 ORTHO05D003090 1.7e-07 59.3 63 47.6
C05p46590 Brassica napus HOM05D001030 ORTHO05D003090 1.7e-07 59.3 63 47.6
BolC5t33387H Brassica oleracea HOM05D001030 ORTHO05D003090 1.7e-07 59.3 63 47.6
BraA05t21912Z Brassica rapa HOM05D001030 ORTHO05D003090 1.7e-07 59.3 63 47.6
A01p35590 Brassica napus HOM05D001030 ORTHO05D003090 2.2e-07 58.9 63 47.6
BraA01t03640Z Brassica rapa HOM05D001030 ORTHO05D003090 2.2e-07 58.9 63 47.6
Carub.0003s1869 Capsella rubella HOM05D001030 ORTHO05D003090 2.2e-07 58.9 63 47.6
Thhalv10020918m.g Eutrema salsugineum HOM05D001030 ORTHO05D003090 2.2e-07 58.9 63 47.6
Sp3g16950 Schrenkiella parvula HOM05D001030 ORTHO05D003090 2.2e-07 58.9 63 47.6
BcaC09g48856 Brassica carinata HOM05D001030 ORTHO05D003090 2.9e-07 58.5 63 47.6
C01p45170 Brassica napus HOM05D001030 ORTHO05D003090 2.9e-07 58.5 63 47.6
BolC1t04490H Brassica oleracea HOM05D001030 ORTHO05D003090 2.9e-07 58.5 63 47.6
AL3G32240 Arabidopsis lyrata HOM05D001030 ORTHO05D003090 6.5e-07 57.4 63 46.0
AT3G18850 Arabidopsis thaliana HOM05D001030 ORTHO05D003090 8.5e-07 57.0 63 46.0
BcaB04g20740 Brassica carinata HOM05D001030 ORTHO05D003090 8.5e-07 57.0 63 46.0
Os01g0782500 Oryza sativa ssp. japonica HOM05D001030 ORTHO05D003090 1.1e-06 56.6 63 42.9
Aa31LG8G5690 Aethionema arabicum HOM05D001030 ORTHO05D003090 1.9e-06 55.8 63 44.4
CARHR094300 Cardamine hirsuta HOM05D001030 ORTHO05D003090 1.9e-06 55.8 63 47.6
Zm00001eb151440 Zea mays HOM05D001030 ORTHO05D003090 2.5e-06 55.5 73 35.6
vmacro19440 Vaccinium macrocarpon HOM05D001030 ORTHO05D003090 7.2e-06 53.9 68 41.2


User provided reference genes

Program Settings