Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaB03g12134 Brassica carinata HOM05D000233 ORTHO05D000020 3.2e-74 281.6 135 100.0
BcaC01g00009 Brassica carinata HOM05D000233 ORTHO05D000020 3.2e-74 281.6 135 100.0
C03p74770 Brassica napus HOM05D000233 ORTHO05D000020 3.2e-74 281.6 135 100.0
BolC3t19726H Brassica oleracea HOM05D000233 ORTHO05D000020 1.6e-73 279.3 135 99.3
A08p25850 Brassica napus HOM05D000233 ORTHO05D000020 7.3e-66 253.8 139 90.6
BraA08t34540Z Brassica rapa HOM05D000233 ORTHO05D000020 1.2e-65 253.1 139 91.4
BcaB03g12133 Brassica carinata HOM05D000233 ORTHO05D000020 1.0e-56 223.4 146 80.8
Sp1g24350 Schrenkiella parvula HOM05D000233 ORTHO05D000020 5.8e-55 217.6 145 78.6
BraA07t28932Z Brassica rapa HOM05D000233 ORTHO05D000020 3.5e-52 208.4 146 74.7
A07p11440 Brassica napus HOM05D000233 ORTHO05D000020 7.8e-52 207.2 146 74.0
Carub.0001s2659 Capsella rubella HOM05D000233 ORTHO05D000020 2.3e-51 205.7 146 73.3
BcaC06g35339 Brassica carinata HOM05D000233 ORTHO05D000020 3.0e-51 205.3 146 74.0
C07p17230 Brassica napus HOM05D000233 ORTHO05D000020 3.0e-51 205.3 146 74.0
BolC7t42227H Brassica oleracea HOM05D000233 ORTHO05D000020 3.0e-51 205.3 146 74.0
A09p37880 Brassica napus HOM05D000233 ORTHO05D000020 7.3e-50 200.7 146 74.7
BraA09t39300Z Brassica rapa HOM05D000233 ORTHO05D000020 7.3e-50 200.7 146 74.7
BcaB03g13948 Brassica carinata HOM05D000233 ORTHO05D000020 1.2e-49 199.9 146 71.9
AT1G28160 Arabidopsis thaliana HOM05D000233 ORTHO05D000020 1.6e-49 199.5 148 69.6
Thhalv10009328m.g Eutrema salsugineum HOM05D000233 ORTHO05D000020 2.1e-49 199.1 148 71.6
BcaB07g32426 Brassica carinata HOM05D000233 ORTHO05D000020 3.6e-49 198.4 136 76.5
AL1G41690 Arabidopsis lyrata HOM05D000233 ORTHO05D000020 1.8e-48 196.1 146 67.8
C05p26960 Brassica napus HOM05D000233 ORTHO05D000020 8.9e-48 193.7 146 72.6
CARHR027630 Cardamine hirsuta HOM05D000233 ORTHO05D000020 1.2e-47 193.4 148 65.5
BcaC05g26823 Brassica carinata HOM05D000233 ORTHO05D000020 3.4e-47 191.8 146 71.9
BolC5t31415H Brassica oleracea HOM05D000233 ORTHO05D000020 3.4e-47 191.8 146 71.9
Aa31sc50G60 Aethionema arabicum HOM05D000233 ORTHO05D000020 6.6e-27 124.4 149 51.0
THA.LOC104812607 Tarenaya hassleriana HOM05D000233 ORTHO05D000020 3.9e-19 98.6 164 40.2
THA.LOC104814685 Tarenaya hassleriana HOM05D000233 ORTHO05D000020 9.6e-18 94.0 175 37.1
Manes.08G099800 Manihot esculenta HOM05D000233 ORTHO05D000020 1.0e-06 57.4 186 31.7
TWI75G1295 Tripterygium wilfordii HOM05D000233 ORTHO05D000020 2.9e-06 55.8 170 32.4
Thecc.02G189700 Theobroma cacao HOM05D000233 ORTHO05D000020 4.9e-06 55.1 158 34.2


User provided reference genes

Program Settings