Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaB03g12131 Brassica carinata HOM05D010217 ORTHO05D014062 2.5e-69 265.4 141 100.0
BcaB03g12132 Brassica carinata HOM05D010217 ORTHO05D014062 2.5e-69 265.4 141 100.0
BolC3t19727H Brassica oleracea HOM05D010217 ORTHO05D014062 8.4e-57 223.8 139 83.5
BcaC01g00010 Brassica carinata HOM05D010217 ORTHO05D014062 1.1e-56 223.4 139 84.2
C03p74780 Brassica napus HOM05D010217 ORTHO05D014062 1.1e-56 223.4 139 84.2
BraA08t34539Z Brassica rapa HOM05D010217 ORTHO05D014062 4.9e-49 198.0 139 77.7
A08p25840 Brassica napus HOM05D010217 ORTHO05D014062 3.7e-44 181.8 131 75.6
BcaB01g02581 Brassica carinata HOM05D010217 ORTHO05D014062 3.1e-27 125.6 137 52.6
C03p36360 Brassica napus HOM05D010217 ORTHO05D014062 3.1e-27 125.6 137 52.6
BolC3t15950H Brassica oleracea HOM05D010217 ORTHO05D014062 3.1e-27 125.6 137 52.6
Carub.0001s0277 Capsella rubella HOM05D010217 ORTHO05D014062 9.1e-27 124.0 139 51.1
BraA03t12198Z Brassica rapa HOM05D010217 ORTHO05D014062 5.9e-26 121.3 137 50.4
Sp6g04300 Schrenkiella parvula HOM05D010217 ORTHO05D014062 5.9e-26 121.3 139 54.7
A03p30150 Brassica napus HOM05D010217 ORTHO05D014062 1.0e-25 120.6 137 51.1
AT1G03660 Arabidopsis thaliana HOM05D010217 ORTHO05D014062 1.7e-20 103.2 98 57.1
Sp6g04290 Schrenkiella parvula HOM05D000264 ORTHO05D000152 4.2e-16 88.6 125 44.8
C08p52710 Brassica napus HOM05D010217 ORTHO05D027043 9.4e-16 87.4 139 37.4
BcaC07g42235 Brassica carinata HOM05D010217 ORTHO05D027043 1.6e-15 86.7 130 40.8
BcaC07g42240 Brassica carinata HOM05D010217 ORTHO05D027043 2.7e-15 85.9 136 38.2
BolC8t52797H Brassica oleracea HOM05D010217 ORTHO05D027043 2.7e-15 85.9 136 38.2
Thhalv10002443m.g Eutrema salsugineum HOM05D000264 ORTHO05D000152 1.4e-11 73.6 132 37.9
BcaC03g14743 Brassica carinata HOM05D000264 ORTHO05D000152 4.1e-11 72.0 126 39.7
C02p21940 Brassica napus HOM05D000264 ORTHO05D000152 1.2e-10 70.5 126 39.7
A02p13600 Brassica napus HOM05D000264 ORTHO05D000152 4.5e-10 68.6 123 39.8
BraA02t06419Z Brassica rapa HOM05D000264 ORTHO05D000152 4.5e-10 68.6 123 39.8
A09p68260 Brassica napus HOM05D000803 ORTHO05D001162 7.7e-10 67.8 113 36.3
BcaB01g02537 Brassica carinata HOM05D000264 ORTHO05D000152 1.0e-09 67.4 128 35.9
C08p52720 Brassica napus HOM05D010217 ORTHO05D028134 1.0e-09 67.4 96 41.7
BolC8t52798H Brassica oleracea HOM05D010217 ORTHO05D028134 1.0e-09 67.4 96 41.7
BcaC01g06675 Brassica carinata HOM05D000264 ORTHO05D000152 1.7e-09 66.6 112 41.1
C03p36730 Brassica napus HOM05D000264 ORTHO05D000152 1.7e-09 66.6 112 41.1
BolC3t15987H Brassica oleracea HOM05D000264 ORTHO05D000152 1.7e-09 66.6 112 41.1
BraA09t42162Z Brassica rapa HOM05D010217 ORTHO05D028134 2.2e-09 66.2 96 40.6
A09p68270 Brassica napus HOM05D010217 ORTHO05D028134 2.9e-09 65.9 96 40.6
Dinv02172 Davidia involucrata HOM05D000264 ORTHO05D000152 2.9e-09 65.9 130 38.5
BraA03t12224Z Brassica rapa HOM05D000264 ORTHO05D000152 3.8e-09 65.5 112 40.2
CARHR251900 Cardamine hirsuta HOM05D000264 ORTHO05D000001 1.5e-08 63.5 113 38.1
GSVIVG01030372001 Vitis vinifera HOM05D000264 ORTHO05D000152 9.4e-08 60.8 114 35.1
AT4G03460 Arabidopsis thaliana HOM05D000264 ORTHO05D000152 1.2e-07 60.5 112 38.4
Carub.0006s3361 Capsella rubella HOM05D000264 ORTHO05D000152 1.2e-07 60.5 112 38.4
CARHR002990 Cardamine hirsuta HOM05D000264 ORTHO05D000152 1.6e-07 60.1 136 37.5
Cc05_g06990 Coffea canephora HOM05D000264 ORTHO05D000152 3.6e-07 58.9 124 33.9
TAR624G1302 Trochodendron aralioides HOM05D000264 ORTHO05D000152 4.7e-07 58.5 135 34.8
EL10Ac4g07662 Beta vulgaris HOM05D000264 ORTHO05D000152 6.1e-07 58.2 134 29.1
Migut.D00741 Erythranthe guttata HOM05D000264 ORTHO05D000152 6.1e-07 58.2 129 37.2
vmacro12289 Vaccinium macrocarpon HOM05D000264 ORTHO05D000152 6.1e-07 58.2 130 33.1
vmacro22811 Vaccinium macrocarpon HOM05D000264 ORTHO05D000152 6.1e-07 58.2 130 33.1
AT4G03500 Arabidopsis thaliana HOM05D000264 ORTHO05D000152 8.0e-07 57.8 112 37.5
Dinv23656 Davidia involucrata HOM05D000264 ORTHO05D000152 1.0e-06 57.4 108 40.7
Migut.H01079 Erythranthe guttata HOM05D000264 ORTHO05D000152 1.0e-06 57.4 123 33.3
vmacro12293 Vaccinium macrocarpon HOM05D000264 ORTHO05D000152 1.4e-06 57.0 126 32.5
Ah.15g093680 Amaranthus hybridus HOM05D000264 ORTHO05D000152 1.8e-06 56.6 111 36.0
Dinv26423 Davidia involucrata HOM05D000264 ORTHO05D000152 1.8e-06 56.6 128 34.4
GSVIVG01020524001 Vitis vinifera HOM05D000264 ORTHO05D000152 1.8e-06 56.6 129 33.3
GSVIVG01020530001 Vitis vinifera HOM05D000264 ORTHO05D000152 1.8e-06 56.6 134 32.8
QL02p056100 Quercus lobata HOM05D000264 ORTHO05D000152 2.3e-06 56.2 131 34.4
QL05p018838 Quercus lobata HOM05D000264 ORTHO05D000152 2.3e-06 56.2 131 34.4
Rhsim06G0144100 Rhododendron simsii HOM05D000264 ORTHO05D000152 2.3e-06 56.2 133 30.8
Rhsim06G0144200 Rhododendron simsii HOM05D000264 ORTHO05D000152 2.3e-06 56.2 115 34.8
Rhsim06G0145000 Rhododendron simsii HOM05D000264 ORTHO05D000152 2.3e-06 56.2 115 34.8
Actinidia11041 Actinidia chinensis HOM05D000264 ORTHO05D000152 3.0e-06 55.8 113 36.3
CSS0000780 Camellia sinensis var. sinensis HOM05D000264 ORTHO05D000152 3.0e-06 55.8 110 38.2
CSS0018607 Camellia sinensis var. sinensis HOM05D000264 ORTHO05D000152 3.0e-06 55.8 110 38.2
vmacro12290 Vaccinium macrocarpon HOM05D000264 ORTHO05D000152 3.0e-06 55.8 121 33.9
vmacro22812 Vaccinium macrocarpon HOM05D000264 ORTHO05D000152 3.0e-06 55.8 121 33.9
GSVIVG01020517001 Vitis vinifera HOM05D000264 ORTHO05D000152 3.0e-06 55.8 125 31.2
Actinidia11042 Actinidia chinensis HOM05D000264 ORTHO05D000152 4.0e-06 55.5 113 36.3
Prupe.3G153800 Prunus persica HOM05D000264 ORTHO05D000152 5.2e-06 55.1 110 37.3
GSVIVG01030360001 Vitis vinifera HOM05D000264 ORTHO05D000152 5.2e-06 55.1 125 31.2
GSVIVG01030362001 Vitis vinifera HOM05D000264 ORTHO05D000152 5.2e-06 55.1 125 31.2
A02p37150 Brassica napus HOM05D000264 ORTHO05D000152 6.7e-06 54.7 107 36.4
BraA02t08701Z Brassica rapa HOM05D000264 ORTHO05D000152 6.7e-06 54.7 107 36.4
Hma1.2p1_0213F.1_g090350 Hydrangea macrophylla HOM05D000264 ORTHO05D000152 6.7e-06 54.7 123 30.9
Prupe.3G135100 Prunus persica HOM05D000264 ORTHO05D000152 6.7e-06 54.7 128 34.4
QL05p018975 Quercus lobata HOM05D000264 ORTHO05D000152 6.7e-06 54.7 131 34.4
BcaC03g17617 Brassica carinata HOM05D000264 ORTHO05D000152 8.8e-06 54.3 107 36.4
C02p56170 Brassica napus HOM05D000264 ORTHO05D000152 8.8e-06 54.3 107 36.4
BolC2t11673H Brassica oleracea HOM05D000264 ORTHO05D000152 8.8e-06 54.3 107 36.4
Migut.H01080 Erythranthe guttata HOM05D000264 ORTHO05D000152 8.8e-06 54.3 129 32.6
RcHm_v2.0_Chr3g0461161 Rosa chinensis HOM05D000264 ORTHO05D000152 8.8e-06 54.3 126 33.3
GSVIVG01030371001 Vitis vinifera HOM05D000264 ORTHO05D000152 8.8e-06 54.3 125 31.2


User provided reference genes

Program Settings