Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaB03g12124 Brassica carinata HOM05D000266 ORTHO05D095333 3.0e-54 214.9 109 100.0
Thhalv10009673m.g Eutrema salsugineum HOM05D000266 ORTHO05D000819 5.4e-11 71.2 83 53.0
BcaB03g13947 Brassica carinata HOM05D000266 ORTHO05D000819 2.0e-10 69.3 83 51.8
BcaC06g35340 Brassica carinata HOM05D000266 ORTHO05D000819 2.7e-10 68.9 83 50.6
A07p11410 Brassica napus HOM05D000266 ORTHO05D000819 2.7e-10 68.9 83 50.6
C07p17210 Brassica napus HOM05D000266 ORTHO05D000819 2.7e-10 68.9 83 50.6
BolC7t42225H Brassica oleracea HOM05D000266 ORTHO05D000819 2.7e-10 68.9 83 50.6
BraA07t28929Z Brassica rapa HOM05D000266 ORTHO05D000819 2.7e-10 68.9 83 50.6
CARHR027710 Cardamine hirsuta HOM05D000266 ORTHO05D000819 6.0e-10 67.8 83 49.4
AL1G41770 Arabidopsis lyrata HOM05D000266 ORTHO05D000819 7.8e-10 67.4 103 44.7
Sp1g24420 Schrenkiella parvula HOM05D000266 ORTHO05D000819 1.0e-09 67.0 83 50.6
Carub.0001s2666 Capsella rubella HOM05D000266 ORTHO05D000819 3.9e-09 65.1 103 41.7
AT1G28220 Arabidopsis thaliana HOM05D000266 ORTHO05D000819 1.5e-08 63.2 100 44.0
THA.LOC104820541 Tarenaya hassleriana HOM05D000266 ORTHO05D000819 1.9e-08 62.8 103 37.9
Aa31sc50G90 Aethionema arabicum HOM05D000266 ORTHO05D000819 5.6e-08 61.2 79 50.6
A05p11850 Brassica napus HOM05D000266 ORTHO05D000819 6.2e-07 57.8 77 45.5
BraA05t20126Z Brassica rapa HOM05D000266 ORTHO05D000819 6.2e-07 57.8 77 45.5
CARHR024060 Cardamine hirsuta HOM05D000266 ORTHO05D000819 1.4e-06 56.6 101 34.7
CARHR127820 Cardamine hirsuta HOM05D000266 ORTHO05D000819 1.4e-06 56.6 101 33.7
BcaB06g28717 Brassica carinata HOM05D000266 ORTHO05D000819 3.1e-06 55.5 66 47.0
THA.LOC104812610 Tarenaya hassleriana HOM05D000266 ORTHO05D000819 4.0e-06 55.1 101 37.6
BcaC02g11450 Brassica carinata HOM05D000266 ORTHO05D000819 5.2e-06 54.7 66 48.5
C04p15420 Brassica napus HOM05D000266 ORTHO05D000819 5.2e-06 54.7 66 48.5
BolC4t23113H Brassica oleracea HOM05D000266 ORTHO05D000819 5.2e-06 54.7 66 48.5
BcaB02g10588 Brassica carinata HOM05D000266 ORTHO05D000819 6.8e-06 54.3 66 48.5
CARHR127770 Cardamine hirsuta HOM05D000266 ORTHO05D000819 6.8e-06 54.3 79 38.0
CARHR127810 Cardamine hirsuta HOM05D000266 ORTHO05D000819 6.8e-06 54.3 79 34.2
Lsat_1_v5_gn_1_2081 Lactuca sativa HOM05D000266 ORTHO05D000819 6.8e-06 54.3 76 42.1
THA.LOC104820542 Tarenaya hassleriana HOM05D000266 ORTHO05D000819 8.9e-06 53.9 98 37.8


User provided reference genes

Program Settings