Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaB03g12097 Brassica carinata HOM05D007416 ORTHO05D009329 3.3e-56 221.5 112 100.0
BcaC01g00068 Brassica carinata HOM05D007416 ORTHO05D009329 1.6e-50 202.6 113 92.0
BraA07t28904Z Brassica rapa HOM05D007416 ORTHO05D009329 1.0e-49 199.9 112 87.5
C07p16790 Brassica napus HOM05D007416 ORTHO05D009329 1.8e-49 199.1 112 88.4
Sp1g24790 Schrenkiella parvula HOM05D007416 ORTHO05D009329 1.4e-46 189.5 112 89.3
BolC7t42186H Brassica oleracea HOM05D007416 ORTHO05D009329 2.4e-46 188.7 112 86.6
A08p25450 Brassica napus HOM05D007416 ORTHO05D009329 5.3e-46 187.6 115 87.0
C03p75360 Brassica napus HOM05D007416 ORTHO05D009329 1.2e-45 186.4 109 87.2
BolC3t19794H Brassica oleracea HOM05D007416 ORTHO05D009329 1.2e-45 186.4 104 90.4
CARHR028020 Cardamine hirsuta HOM05D007416 ORTHO05D009329 1.0e-44 183.3 110 86.4
Thhalv10009143m.g Eutrema salsugineum HOM05D007416 ORTHO05D009329 1.1e-43 179.9 116 81.9
BraA08t34496Z Brassica rapa HOM05D007416 ORTHO05D009329 7.9e-42 173.7 110 82.7
AL1G42170 Arabidopsis lyrata HOM05D007416 ORTHO05D009329 1.9e-40 169.1 112 83.0
AT1G28540 Arabidopsis thaliana HOM05D007416 ORTHO05D009329 3.8e-36 154.8 112 79.5
Carub.0001s2700 Capsella rubella HOM05D007416 ORTHO05D009329 2.1e-34 149.1 112 75.0
A07p11140 Brassica napus HOM05D007416 ORTHO05D009329 1.0e-33 146.7 85 84.7
THA.LOC104812624 Tarenaya hassleriana HOM05D007416 ORTHO05D009329 6.3e-31 137.5 107 66.4
Hma1.2p1_1465F.1_g285370 Hydrangea macrophylla HOM05D007416 ORTHO05D009329 2.2e-28 129.0 97 67.0
MELO3C007245.2 Cucumis melo HOM05D007416 ORTHO05D009329 8.5e-28 127.1 95 66.3
Potri.004G051300 Populus trichocarpa HOM05D007416 ORTHO05D009329 8.5e-28 127.1 103 65.0
Prupe.4G055000 Prunus persica HOM05D007416 ORTHO05D009329 5.5e-27 124.4 112 59.8
CsaV3_6G050530 Cucumis sativus L. HOM05D007416 ORTHO05D009329 2.1e-26 122.5 101 61.4
Cfa000548 Carpinus fangiana HOM05D007416 ORTHO05D009329 6.1e-26 120.9 96 62.5
AUR62031108 Chenopodium quinoa HOM05D007416 ORTHO05D009329 8.0e-26 120.6 117 59.0
Ah.09g237760 Amaranthus hybridus HOM05D007416 ORTHO05D009329 1.0e-25 120.2 98 62.2
CiPaw.10G054100 Carya illinoinensis HOM05D007416 ORTHO05D009329 1.0e-25 120.2 100 61.0
AUR62014900 Chenopodium quinoa HOM05D007416 ORTHO05D009329 1.0e-25 120.2 115 60.0
Haze_06330 Corylus avellana HOM05D007416 ORTHO05D009329 1.4e-25 119.8 109 57.8
Eucgr.D00578 Eucalyptus grandis HOM05D007416 ORTHO05D009329 1.4e-25 119.8 87 62.1
Sc17g0005840 Simmondsia chinensis HOM05D007416 ORTHO05D009329 2.3e-25 119.0 88 63.6
Sed0002237 Sechium edule HOM05D007416 ORTHO05D009329 3.0e-25 118.6 98 64.3
PGR004G2353 Punica granatum HOM05D007416 ORTHO05D009329 5.2e-25 117.9 78 69.2
CANSAT35G0095 Cannabis sativa HOM05D007416 ORTHO05D009329 6.7e-25 117.5 88 68.2
ClCG01G023400 Citrullus lanatus HOM05D007416 ORTHO05D009329 6.7e-25 117.5 98 60.2
Aqoxy1G02242 Aquilegia oxysepala HOM05D007416 ORTHO05D009329 1.1e-24 116.7 99 60.6
COL.COLO4_31395 Corchorus olitorius HOM05D007416 ORTHO05D009329 1.1e-24 116.7 110 60.0
Manes.17G051100 Manihot esculenta HOM05D007416 ORTHO05D009329 1.1e-24 116.7 118 55.9
Gohir.A02G025200 Gossypium hirsutum HOM05D007416 ORTHO05D009329 2.0e-24 115.9 103 55.3
unitig_8.g4633 Utricularia gibba HOM05D007416 ORTHO05D009329 2.0e-24 115.9 91 63.7
unitig_8.g4637 Utricularia gibba HOM05D007416 ORTHO05D009329 2.0e-24 115.9 91 63.7
unitig_8.g4657 Utricularia gibba HOM05D004204 ORTHO05D005069 2.0e-24 115.9 94 61.7
TWI38G0960 Tripterygium wilfordii HOM05D007416 ORTHO05D009329 2.6e-24 115.5 106 50.0
CSS0002821 Camellia sinensis var. sinensis HOM05D007416 ORTHO05D009329 3.3e-24 115.2 91 61.5
Migut.M01088 Erythranthe guttata HOM05D007416 ORTHO05D009329 3.3e-24 115.2 114 55.3
QL05p043606 Quercus lobata HOM05D007416 ORTHO05D009329 3.3e-24 115.2 111 55.9
Cpa.g.sc7.10 Carica papaya HOM05D007416 ORTHO05D009329 5.7e-24 114.4 79 67.1
ECA234G4626 Erigeron canadensis HOM05D007416 ORTHO05D009329 5.7e-24 114.4 72 72.2
Gohir.D02G032400 Gossypium hirsutum HOM05D007416 ORTHO05D009329 5.7e-24 114.4 108 53.7
Psat1g201280 Pisum sativum HOM05D007416 ORTHO05D009329 5.7e-24 114.4 88 59.1
SGA_v2.0_scaffold309G48156 Striga asiatica HOM05D007416 ORTHO05D009329 5.7e-24 114.4 112 57.1
Dinv17369 Davidia involucrata HOM05D007416 ORTHO05D009329 1.7e-23 112.8 80 68.8
Os06g0524500 Oryza sativa ssp. japonica HOM05D007416 ORTHO05D009329 1.7e-23 112.8 72 68.1
TWI63G0778 Tripterygium wilfordii HOM05D007416 ORTHO05D009329 2.2e-23 112.5 109 52.3
Aa31LG6G11050 Aethionema arabicum HOM05D007416 ORTHO05D009329 2.8e-23 112.1 59 83.1
Gorai.005G035900 Gossypium raimondii HOM05D007416 ORTHO05D009329 2.8e-23 112.1 108 52.8
MD10G1286700 Malus domestica HOM05D007416 ORTHO05D009329 2.8e-23 112.1 91 61.5
Oeu012170.1 Olea europaea HOM05D007416 ORTHO05D009329 2.8e-23 112.1 71 70.4
Peaxi162Scf00248g00011 Petunia axillaris HOM05D007416 ORTHO05D009329 2.8e-23 112.1 74 70.3
Ciclev10017211m.g Citrus clementina HOM05D007416 ORTHO05D009329 3.7e-23 111.7 107 51.4
Cc02_g14200 Coffea canephora HOM05D007416 ORTHO05D009329 3.7e-23 111.7 100 60.0
SalBow8G2036 Salvia bowleyana HOM05D007416 ORTHO05D009329 3.7e-23 111.7 107 57.0
Thecc.06G178300 Theobroma cacao HOM05D007416 ORTHO05D009329 4.8e-23 111.3 112 56.2
Nn1g06362 Nelumbo nucifera HOM05D007416 ORTHO05D009329 6.3e-23 110.9 113 53.1
TAR627G0809 Trochodendron aralioides HOM05D003433 ORTHO05D003921 6.3e-23 110.9 67 73.1
SGA_v2.0_scaffold16G07657 Striga asiatica HOM05D007416 ORTHO05D009329 1.4e-22 109.8 100 58.0
Atru.chr10.1755 Acer truncatum HOM05D007416 ORTHO05D009329 1.8e-22 109.4 95 60.0
Solyc10g008850.2 Solanum lycopersicum HOM05D007416 ORTHO05D009329 1.8e-22 109.4 69 69.6
Sopen10g004640 Solanum pennellii HOM05D007416 ORTHO05D009329 1.8e-22 109.4 69 69.6
BcaC06g35377 Brassica carinata HOM05D007416 ORTHO05D009329 2.4e-22 109.0 112 58.0
BcaNung06837 Brassica carinata HOM05D007416 ORTHO05D009329 2.4e-22 109.0 112 58.0
Lalb_Chr20g0121431 Lupinus albus HOM05D007416 ORTHO05D009329 3.1e-22 108.6 68 69.1
EL10Ac8g20461 Beta vulgaris HOM05D007416 ORTHO05D009329 7.0e-22 107.5 71 66.2
HanXRQChr14g0454031 Helianthus annuus HOM05D007416 ORTHO05D009329 7.0e-22 107.5 104 54.8
HPP92_005210 Vanilla planifolia HOM05D007416 ORTHO05D009329 9.1e-22 107.1 88 55.7
FAN21G3844 Fragaria x ananassa HOM05D007416 ORTHO05D009329 1.2e-21 106.7 85 61.2
Lsat_1_v5_gn_1_119080 Lactuca sativa HOM05D007416 ORTHO05D009329 1.2e-21 106.7 98 53.1
Lj6g0009243 Lotus japonicus HOM05D007416 ORTHO05D009329 1.2e-21 106.7 68 67.6
Nitab4.5_0002114g0110 Nicotiana tabacum HOM05D007416 ORTHO05D009329 1.2e-21 106.7 105 55.2
PSO675G1239 Papaver somniferum HOM05D007416 ORTHO05D009329 1.2e-21 106.7 97 51.5
Os06g0525000 Oryza sativa ssp. japonica HOM05D007416 ORTHO05D009329 1.6e-21 106.3 105 54.3
arahy.Tifrunner.gnm1.ann1.96U62E Arachis hypogaea HOM05D007416 ORTHO05D009329 2.0e-21 105.9 89 56.2
Nitab4.5_0014582g0020 Nicotiana tabacum HOM05D007416 ORTHO05D009329 2.0e-21 105.9 107 52.3
arahy.Tifrunner.gnm1.ann1.46W2M6 Arachis hypogaea HOM05D007416 ORTHO05D009329 4.5e-21 104.8 84 58.3
FvH4_3g08330 Fragaria vesca HOM05D007416 ORTHO05D009329 4.5e-21 104.8 85 61.2
FAN16G3750 Fragaria x ananassa HOM05D007416 ORTHO05D009329 4.5e-21 104.8 85 61.2
FAN25G0684 Fragaria x ananassa HOM05D007416 ORTHO05D009329 4.5e-21 104.8 62 74.2
RcHm_v2.0_Chr5g0009671 Rosa chinensis HOM05D007416 ORTHO05D009329 4.5e-21 104.8 90 60.0
PGSC0003DMG400022819 Solanum tuberosum HOM05D007416 ORTHO05D009329 4.5e-21 104.8 107 50.5
TPR.G11747 Trifolium pratense HOM05D007416 ORTHO05D009329 5.9e-21 104.4 104 54.8
TPR.G39540 Trifolium pratense HOM05D007416 ORTHO05D009329 5.9e-21 104.4 97 55.7
CDE05G1837 Ceratophyllum demersum HOM05D007416 ORTHO05D009329 1.0e-20 103.6 106 52.8
Actinidia07614 Actinidia chinensis HOM05D007416 ORTHO05D009329 1.3e-20 103.2 73 60.3
CAN.G361.15 Capsicum annuum HOM05D007416 ORTHO05D009329 3.8e-20 101.7 104 51.9
Phvul.006G180100 Phaseolus vulgaris HOM05D007416 ORTHO05D009329 6.5e-20 100.9 103 50.5
Ca_00403_v3 Cicer arietinum L. HOM05D007416 ORTHO05D009329 1.1e-19 100.1 101 50.5
Medtr2g014970 Medicago truncatula HOM05D007416 ORTHO05D009329 1.5e-19 99.8 91 51.6
HPP92_008637 Vanilla planifolia HOM05D007416 ORTHO05D009329 4.2e-19 98.2 78 59.0
Glyma.13G152576 Glycine max HOM05D007416 ORTHO05D009329 5.5e-19 97.8 93 52.7
Rhsim02G0137800 Rhododendron simsii HOM05D007416 ORTHO05D009329 1.2e-18 96.7 123 47.2
VMungo0540G0454 Vigna mungo HOM05D007416 ORTHO05D009329 1.2e-18 96.7 110 47.3
AUR62031107 Chenopodium quinoa HOM05D007416 ORTHO05D009329 4.0e-17 91.7 77 57.1
FAN11G0205 Fragaria x ananassa HOM05D007416 ORTHO05D009329 2.6e-16 89.0 67 64.2
Mapoly0016s0097 Marchantia polymorpha HOM05D007416 ORTHO05D009329 3.7e-15 85.1 94 48.9
Pp3c24_10110 Physcomitrium patens HOM05D007416 ORTHO05D009329 1.6e-13 79.7 105 41.9
AagrBONN_evm.TU.Sc2ySwM_362.2610 Anthoceros agrestis HOM05D007416 ORTHO05D009329 4.7e-10 68.2 65 50.8


User provided reference genes

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