Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaB03g12091 Brassica carinata HOM05D005523 ORTHO05D007089 1.2e-70 269.6 128 100.0
A06p43010 Brassica napus HOM05D005523 ORTHO05D007089 2.1e-67 258.8 128 96.1
C07p34020 Brassica napus HOM05D005523 ORTHO05D007089 4.0e-66 254.6 128 94.5
BolC7t43916H Brassica oleracea HOM05D005523 ORTHO05D007089 9.0e-66 253.4 128 93.8
AL5G13440 Arabidopsis lyrata HOM05D005523 ORTHO05D007089 4.9e-64 247.7 131 89.3
Sp2g14490 Schrenkiella parvula HOM05D005523 ORTHO05D007089 6.4e-64 247.3 131 90.8
Carub.0005s0279 Capsella rubella HOM05D005523 ORTHO05D007089 8.4e-64 246.9 131 90.1
CARHR145990 Cardamine hirsuta HOM05D005523 ORTHO05D007089 1.4e-63 246.1 131 89.3
AT2G03667 Arabidopsis thaliana HOM05D005523 ORTHO05D007089 2.1e-62 242.3 131 87.8
Aa31LG2G7010 Aethionema arabicum HOM05D005523 ORTHO05D007089 2.3e-61 238.8 130 86.9
Thhalv10003838m.g Eutrema salsugineum HOM05D005523 ORTHO05D007089 2.3e-61 238.8 131 87.0
Prupe.1G288300 Prunus persica HOM05D005523 ORTHO05D007089 1.8e-58 229.2 130 84.6
THA.LOC104805203 Tarenaya hassleriana HOM05D005523 ORTHO05D007089 3.4e-57 224.9 130 81.5
BcaC06g31164 Brassica carinata HOM05D005523 ORTHO05D006344 7.6e-57 223.8 108 97.2
MD16G1060200 Malus domestica HOM05D005523 ORTHO05D007089 8.4e-56 220.3 130 80.8
CAN.G707.6 Capsicum annuum HOM05D005523 ORTHO05D007089 1.4e-55 219.5 128 81.2
Nitab4.5_0000231g0170 Nicotiana tabacum HOM05D005523 ORTHO05D007089 1.9e-55 219.2 128 80.5
Solyc05g012200.3 Solanum lycopersicum HOM05D005523 ORTHO05D007089 1.9e-55 219.2 128 82.0
Sopen05g007030 Solanum pennellii HOM05D005523 ORTHO05D007089 1.9e-55 219.2 128 82.0
FAN17G1793 Fragaria x ananassa HOM05D005523 ORTHO05D007089 5.5e-55 217.6 130 79.2
FAN22G0589 Fragaria x ananassa HOM05D005523 ORTHO05D007089 5.5e-55 217.6 130 79.2
ECA234G2689 Erigeron canadensis HOM05D005523 ORTHO05D007089 7.1e-55 217.2 130 77.7
MD13G1061700 Malus domestica HOM05D005523 ORTHO05D007089 7.1e-55 217.2 130 80.0
Peaxi162Scf00175g00035 Petunia axillaris HOM05D005523 ORTHO05D007089 7.1e-55 217.2 128 79.7
FvH4_4g29880 Fragaria vesca HOM05D005523 ORTHO05D007089 9.3e-55 216.9 130 78.5
FAN12G2921 Fragaria x ananassa HOM05D005523 ORTHO05D007089 9.3e-55 216.9 130 78.5
FAN07G2138 Fragaria x ananassa HOM05D005523 ORTHO05D007089 1.2e-54 216.5 130 79.2
PGSC0003DMG400028314 Solanum tuberosum HOM05D005523 ORTHO05D007089 1.6e-54 216.1 128 81.2
RcHm_v2.0_Chr4g0438141 Rosa chinensis HOM05D005523 ORTHO05D007089 3.5e-54 214.9 130 78.5
Sed0024899 Sechium edule HOM05D005523 ORTHO05D007089 4.6e-54 214.5 129 77.5
GSVIVG01012228001 Vitis vinifera HOM05D005523 ORTHO05D007089 4.6e-54 214.5 130 77.7
Nitab4.5_0007061g0020 Nicotiana tabacum HOM05D005523 ORTHO05D007089 6.0e-54 214.2 128 78.9
Manes.05G109800 Manihot esculenta HOM05D005523 ORTHO05D007089 2.3e-53 212.2 131 77.1
TPR.G34024 Trifolium pratense HOM05D005523 ORTHO05D007089 2.3e-53 212.2 128 75.8
Actinidia14169 Actinidia chinensis HOM05D005523 ORTHO05D007089 3.0e-53 211.8 135 77.0
Actinidia28650 Actinidia chinensis HOM05D005523 ORTHO05D007089 3.0e-53 211.8 135 77.0
CSS0034602 Camellia sinensis var. sinensis HOM05D005523 ORTHO05D007089 3.0e-53 211.8 135 77.8
Oeu021803.1 Olea europaea HOM05D005523 ORTHO05D007089 3.0e-53 211.8 130 78.5
EL10Ac6g15006 Beta vulgaris HOM05D005523 ORTHO05D007089 3.9e-53 211.5 130 76.9
Potri.010G157700 Populus trichocarpa HOM05D005523 ORTHO05D007089 3.9e-53 211.5 130 75.4
TAR374G1461 Trochodendron aralioides HOM05D005523 ORTHO05D007089 5.1e-53 211.1 130 76.2
Ciclev10033727m.g Citrus clementina HOM05D005523 ORTHO05D007089 6.7e-53 210.7 130 75.4
Duzib251G0966 Durio zibethinus HOM05D005523 ORTHO05D007089 6.7e-53 210.7 129 76.7
Gohir.D12G164000 Gossypium hirsutum HOM05D005523 ORTHO05D007089 6.7e-53 210.7 129 76.7
Rhsim02G0238300 Rhododendron simsii HOM05D005523 ORTHO05D007089 6.7e-53 210.7 135 74.8
CsaV3_5G033360 Cucumis sativus L. HOM05D005523 ORTHO05D007089 8.7e-53 210.3 129 76.0
Gorai.008G176600 Gossypium raimondii HOM05D005523 ORTHO05D007089 8.7e-53 210.3 129 76.7
QL03p074024 Quercus lobata HOM05D005523 ORTHO05D007089 1.1e-52 209.9 133 74.4
QL03p074443 Quercus lobata HOM05D005523 ORTHO05D007089 1.1e-52 209.9 133 74.4
HanXRQChr17g0552771 Helianthus annuus HOM05D005523 ORTHO05D007089 1.5e-52 209.5 132 74.2
CANSAT64G1787 Cannabis sativa HOM05D005523 ORTHO05D007089 1.9e-52 209.1 128 76.6
Lj4g0005251 Lotus japonicus HOM05D005523 ORTHO05D007089 1.9e-52 209.1 130 76.2
AUR62003091 Chenopodium quinoa HOM05D005523 ORTHO05D007089 2.5e-52 208.8 130 76.9
Eucgr.G02442 Eucalyptus grandis HOM05D005523 ORTHO05D007089 2.5e-52 208.8 130 76.2
MELO3C012156.2 Cucumis melo HOM05D005523 ORTHO05D007089 3.3e-52 208.4 129 76.0
CiPaw.05G124500 Carya illinoinensis HOM05D005523 ORTHO05D007089 4.3e-52 208.0 130 75.4
Medtr4g083180 Medicago truncatula HOM05D005523 ORTHO05D007089 7.4e-52 207.2 128 75.8
Psat7g133840 Pisum sativum HOM05D005523 ORTHO05D007089 7.4e-52 207.2 128 74.2
Ca_18798_v3 Cicer arietinum L. HOM05D005523 ORTHO05D007089 9.6e-52 206.8 128 75.8
Gohir.A12G160700 Gossypium hirsutum HOM05D005523 ORTHO05D007089 9.6e-52 206.8 129 74.4
Glyma.20G025400 Glycine max HOM05D005523 ORTHO05D007089 1.6e-51 206.1 130 73.8
COL.COLO4_27873 Corchorus olitorius HOM05D005523 ORTHO05D007089 2.1e-51 205.7 129 73.6
Thecc.02G329500 Theobroma cacao HOM05D005523 ORTHO05D007089 2.1e-51 205.7 129 75.2
Hund25171 Selenicereus undatus HOM05D005523 ORTHO05D007089 2.8e-51 205.3 130 75.4
Atru.chr11.1618 Acer truncatum HOM05D005523 ORTHO05D007089 6.2e-51 204.1 130 75.4
Phvul.002G101900 Phaseolus vulgaris HOM05D005523 ORTHO05D007089 6.2e-51 204.1 130 72.3
Cc11_g11910 Coffea canephora HOM05D005523 ORTHO05D007089 8.2e-51 203.8 128 77.3
AUR62007908 Chenopodium quinoa HOM05D005523 ORTHO05D007089 1.1e-50 203.4 130 76.2
SalBow2G2481 Salvia bowleyana HOM05D005523 ORTHO05D007089 1.1e-50 203.4 130 73.8
Sc14g0007970 Simmondsia chinensis HOM05D005523 ORTHO05D007089 1.1e-50 203.4 129 74.4
PGR119G1690 Punica granatum HOM05D005523 ORTHO05D007089 1.8e-50 202.6 130 71.5
arahy.Tifrunner.gnm1.ann1.1A68HA Arachis hypogaea HOM05D005523 ORTHO05D007089 2.4e-50 202.2 131 72.5
VMungo0251G0731 Vigna mungo HOM05D005523 ORTHO05D007089 3.1e-50 201.8 130 71.5
TWI79G0260 Tripterygium wilfordii HOM05D005523 ORTHO05D007089 4.1e-50 201.4 130 70.8
arahy.Tifrunner.gnm1.ann1.5T11RT Arachis hypogaea HOM05D005523 ORTHO05D007089 9.0e-50 200.3 131 71.8
Cc03_g11190 Coffea canephora HOM05D005523 ORTHO05D007089 9.0e-50 200.3 128 76.6
Aqoxy3G00520 Aquilegia oxysepala HOM05D005523 ORTHO05D007089 1.2e-49 199.9 130 72.3
Migut.L01183 Erythranthe guttata HOM05D005523 ORTHO05D007089 1.2e-49 199.9 128 74.2
Lsat_1_v5_gn_4_11761 Lactuca sativa HOM05D005523 ORTHO05D007089 1.2e-49 199.9 128 73.4
Lalb_Chr05g0219911 Lupinus albus HOM05D005523 ORTHO05D007089 2.6e-49 198.7 130 70.8
unitig_26.g10286 Utricularia gibba HOM05D005523 ORTHO05D007089 2.6e-49 198.7 130 73.1
BcaB07g30661 Brassica carinata HOM05D005523 ORTHO05D007089 4.5e-49 198.0 147 69.4
SGA_v2.0_scaffold16G07795 Striga asiatica HOM05D005523 ORTHO05D007089 1.7e-48 196.1 128 72.7
DCAR_026677 Daucus carota HOM05D005523 ORTHO05D007089 2.2e-48 195.7 130 73.8
Cfa008872 Carpinus fangiana HOM05D005523 ORTHO05D007089 3.2e-47 191.8 130 73.1
Nn4g23450 Nelumbo nucifera HOM05D005523 ORTHO05D007089 3.2e-47 191.8 130 70.8
PSO478G5042 Papaver somniferum HOM05D005523 ORTHO05D007089 7.1e-47 190.7 128 71.1
HPP92_001825 Vanilla planifolia HOM05D005523 ORTHO05D007089 1.6e-46 189.5 128 71.1
Haze_11899 Corylus avellana HOM05D005523 ORTHO05D007089 2.1e-46 189.1 130 72.3
Zm00001eb029510 Zea mays HOM05D005523 ORTHO05D007089 2.7e-46 188.7 128 64.8
PSO017G3752 Papaver somniferum HOM05D005523 ORTHO05D007089 4.6e-46 188.0 128 71.1
Lsat_1_v5_gn_5_143020 Lactuca sativa HOM05D005523 ORTHO05D007089 1.8e-45 186.0 128 70.3
Cpa.g.sc1.134 Carica papaya HOM05D005523 ORTHO05D007089 1.1e-44 183.3 110 79.1
Pp3c13_5080 Physcomitrium patens HOM05D005523 ORTHO05D007089 1.1e-42 176.8 134 59.7
Mapoly0013s0146 Marchantia polymorpha HOM05D005523 ORTHO05D007089 1.1e-39 166.8 131 57.3
AagrBONN_evm.TU.Sc2ySwM_228.676 Anthoceros agrestis HOM05D005523 ORTHO05D007089 1.4e-39 166.4 132 61.4
Actinidia36738 Actinidia chinensis HOM05D005523 ORTHO05D007089 9.4e-39 163.7 128 66.4
Lj6A778G61 Lonicera japonica HOM05D005523 ORTHO05D007089 2.1e-38 162.5 128 63.3
SMO364G0955 Selaginella moellendorffii HOM05D005523 ORTHO05D007089 1.5e-36 156.4 128 57.8
vmacro10430 Vaccinium macrocarpon HOM05D005523 ORTHO05D007089 3.4e-33 145.2 135 56.3
Lsat_1_v5_gn_5_70240 Lactuca sativa HOM05D005523 ORTHO05D007089 1.7e-32 142.9 97 70.1
CDE10G0904 Ceratophyllum demersum HOM05D005523 ORTHO05D007089 6.5e-32 141.0 128 56.2
Rhsim09G0126700 Rhododendron simsii HOM05D005523 ORTHO05D007089 7.2e-31 137.5 73 84.9
MBI19_g25293_MAGBIO Magnolia biondii HOM05D005523 ORTHO05D007089 1.2e-30 136.7 96 68.8
MBI19_g44450_MAGBIO Magnolia biondii HOM05D005523 ORTHO05D007089 1.2e-30 136.7 128 57.0
BolC9t56002H Brassica oleracea HOM05D005523 ORTHO05D007089 2.7e-30 135.6 66 95.5
RcHm_v2.0_Chr7g0182531 Rosa chinensis HOM05D005523 ORTHO05D007089 7.9e-30 134.0 85 72.9
C09p31430 Brassica napus HOM05D000070 ORTHO05D006344 3.0e-29 132.1 66 93.9
CBR_g50115 Chara braunii HOM05D005523 ORTHO05D007089 3.9e-29 131.7 240 29.6
BcaC04g21469 Brassica carinata HOM05D000070 ORTHO05D006344 9.1e-26 120.6 97 67.0
PRCOL_00003408 Prasinoderma coloniale HOM05D005523 ORTHO05D007089 4.5e-25 118.2 128 45.3
Actinidia12916 Actinidia chinensis HOM05D005523 ORTHO05D007089 2.9e-24 115.5 97 61.9
Lsat_1_v5_gn_7_112061 Lactuca sativa HOM05D005523 ORTHO05D007089 4.2e-23 111.7 67 71.6
Cre07.g321050 Chlamydomonas reinhardtii HOM05D005523 ORTHO05D007089 1.0e-21 107.1 213 32.4
CAN.G602.9 Capsicum annuum HOM05D005523 ORTHO05D007089 2.3e-13 79.3 57 66.7
Lsat_1_v5_gn_7_82480 Lactuca sativa HOM05D005523 ORTHO05D007089 3.5e-09 65.5 97 46.4
HanXRQChr16g0520621 Helianthus annuus HOM05D005523 ORTHO05D007089 1.0e-08 63.9 52 57.7


User provided reference genes

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