Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaB03g11943 Brassica carinata HOM05D008527 ORTHO05D010701 7.4e-85 317.4 186 100.0
BcaB03g11945 Brassica carinata HOM05D008527 ORTHO05D010701 7.4e-85 317.4 186 100.0
A08p28140 Brassica napus HOM05D008527 ORTHO05D010701 1.7e-73 279.6 187 93.6
BraA08t34747Z Brassica rapa HOM05D008527 ORTHO05D010701 1.7e-73 279.6 187 93.6
BcaC07g39203 Brassica carinata HOM05D008527 ORTHO05D010701 2.4e-67 259.2 187 90.4
C08p21950 Brassica napus HOM05D008527 ORTHO05D010701 2.4e-67 259.2 187 90.4
BolC8t49831H Brassica oleracea HOM05D008527 ORTHO05D010701 2.4e-67 259.2 187 90.4
BcaC06g35042 Brassica carinata HOM05D008527 ORTHO05D010701 4.2e-64 248.4 190 87.4
A07p13850 Brassica napus HOM05D008527 ORTHO05D010701 4.2e-64 248.4 190 87.4
BolC7t42561H Brassica oleracea HOM05D008527 ORTHO05D010701 4.2e-64 248.4 190 87.4
BraA07t29139Z Brassica rapa HOM05D008527 ORTHO05D010701 5.5e-64 248.1 189 87.3
Sp1g20970 Schrenkiella parvula HOM05D008527 ORTHO05D010701 1.6e-63 246.5 191 84.8
C07p20400 Brassica napus HOM05D008527 ORTHO05D010701 1.8e-62 243.0 190 86.3
BcaNung06957 Brassica carinata HOM05D008527 ORTHO05D010701 2.7e-55 219.2 187 82.4
BcaB03g14145 Brassica carinata HOM05D008527 ORTHO05D010701 1.4e-54 216.9 193 79.8
AL1G37290 Arabidopsis lyrata HOM05D008527 ORTHO05D010701 3.9e-54 215.3 194 67.0
Thhalv10008871m.g Eutrema salsugineum HOM05D008527 ORTHO05D010701 3.8e-49 198.7 188 73.9
BcaB07g32343 Brassica carinata HOM05D008527 ORTHO05D010701 4.8e-44 181.8 208 55.8
BolC5t30985H Brassica oleracea HOM05D008527 ORTHO05D010701 6.3e-44 181.4 219 57.5
BcaC05g26275 Brassica carinata HOM05D008527 ORTHO05D010701 1.4e-43 180.3 219 57.1
C05p22860 Brassica napus HOM05D008527 ORTHO05D010701 7.0e-43 177.9 219 56.6
A09p41140 Brassica napus HOM05D008527 ORTHO05D010701 2.0e-42 176.4 219 55.7
BraA09t39607Z Brassica rapa HOM05D008527 ORTHO05D010701 2.0e-42 176.4 219 55.7
Carub.0001s2307 Capsella rubella HOM05D008527 ORTHO05D010701 2.9e-41 172.6 192 66.1
AT1G23530 Arabidopsis thaliana HOM05D008527 ORTHO05D010701 6.1e-39 164.9 190 64.2
CARHR023970 Cardamine hirsuta HOM05D008527 ORTHO05D010701 1.4e-35 153.7 196 61.7
Aa31LG7G7580 Aethionema arabicum HOM05D008527 ORTHO05D010701 2.4e-35 152.9 194 63.9
THA.LOC104824704 Tarenaya hassleriana HOM05D008527 ORTHO05D010701 3.5e-26 122.5 187 59.9
THA.LOC104822151 Tarenaya hassleriana HOM05D008527 ORTHO05D010701 2.0e-21 106.7 189 46.0
Sp5g25540 Schrenkiella parvula HOM05D008527 ORTHO05D010701 1.3e-20 104.0 104 62.5
A07p36840 Brassica napus HOM05D008527 ORTHO05D010701 6.3e-20 101.7 111 58.6
Thhalv10019272m.g Eutrema salsugineum HOM05D008527 ORTHO05D010701 2.4e-19 99.8 104 60.6
Aa31LG4G10480 Aethionema arabicum HOM05D008527 ORTHO05D010701 2.0e-18 96.7 153 43.8
Carub.0002s1715 Capsella rubella HOM05D008527 ORTHO05D010701 2.0e-18 96.7 146 44.5
AL2G29840 Arabidopsis lyrata HOM05D008527 ORTHO05D010701 1.0e-17 94.4 141 53.9
A02p16540 Brassica napus HOM05D008527 ORTHO05D010701 1.7e-17 93.6 160 43.8
BraA02t06712Z Brassica rapa HOM05D008527 ORTHO05D010701 1.7e-17 93.6 160 43.8
AT1G70470 Arabidopsis thaliana HOM05D008527 ORTHO05D010701 5.0e-17 92.0 85 62.4
BolC2t08819H Brassica oleracea HOM05D008527 ORTHO05D010701 5.0e-17 92.0 160 43.8
BcaC03g15190 Brassica carinata HOM05D008527 ORTHO05D010701 1.1e-16 90.9 104 54.8
C02p27710 Brassica napus HOM05D008527 ORTHO05D010701 2.1e-15 86.7 104 53.8
A07p31080 Brassica napus HOM05D008527 ORTHO05D010701 4.7e-15 85.5 82 63.4
BraA07t30743Z Brassica rapa HOM05D008527 ORTHO05D010701 4.7e-15 85.5 82 63.4
BcaB05g24574 Brassica carinata HOM05D008527 ORTHO05D010701 1.2e-13 80.9 104 52.9
BcaC08g46489 Brassica carinata HOM05D008527 ORTHO05D010701 2.6e-13 79.7 111 49.5
C06p44320 Brassica napus HOM05D008527 ORTHO05D010701 2.6e-13 79.7 111 49.5
BolC6t39502H Brassica oleracea HOM05D008527 ORTHO05D010701 2.6e-13 79.7 111 49.5
CARHR063630 Cardamine hirsuta HOM05D008527 ORTHO05D010701 2.2e-12 76.6 87 55.2
BcaB05g24577 Brassica carinata HOM05D008527 ORTHO05D010701 6.4e-12 75.1 59 71.2
BcaB03g14805 Brassica carinata HOM05D008527 ORTHO05D010701 1.2e-07 60.8 109 44.0
BraA07t31250Z Brassica rapa HOM05D008527 ORTHO05D010701 1.4e-06 57.4 111 41.4


User provided reference genes

Program Settings