Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaB03g11729 Brassica carinata HOM05D003856 ORTHO05D004547 1.4e-136 489.6 247 100.0
BcaC01g00774 Brassica carinata HOM05D003856 ORTHO05D004547 4.6e-135 484.6 247 99.2
A08p15680 Brassica napus HOM05D003856 ORTHO05D004547 4.6e-135 484.6 247 99.2
C03p84130 Brassica napus HOM05D003856 ORTHO05D004547 1.0e-134 483.4 247 98.8
BolC3t20692H Brassica oleracea HOM05D003856 ORTHO05D004547 1.0e-134 483.4 247 98.8
BraA08t33548Z Brassica rapa HOM05D003856 ORTHO05D004547 1.3e-134 483.0 247 98.8
C01p16660 Brassica napus HOM05D003856 ORTHO05D004547 7.4e-133 477.2 247 97.6
A01p13750 Brassica napus HOM05D003856 ORTHO05D004547 1.6e-132 476.1 247 97.6
BraA01t01320Z Brassica rapa HOM05D003856 ORTHO05D004547 1.6e-132 476.1 247 97.6
AL7G31210 Arabidopsis lyrata HOM05D003856 ORTHO05D004547 3.7e-132 474.9 247 96.8
Thhalv10026090m.g Eutrema salsugineum HOM05D003856 ORTHO05D004547 4.8e-132 474.6 247 97.2
BolC1t01613H Brassica oleracea HOM05D003856 ORTHO05D004547 8.2e-132 473.8 247 97.2
AT4G12590 Arabidopsis thaliana HOM05D003856 ORTHO05D004547 1.8e-131 472.6 245 96.7
Sp7g20520 Schrenkiella parvula HOM05D003856 ORTHO05D004547 2.4e-131 472.2 247 96.8
AL6G47550 Arabidopsis lyrata HOM05D003856 ORTHO05D004547 5.3e-131 471.1 245 96.3
Carub.0006s3186 Capsella rubella HOM05D003856 ORTHO05D004547 5.8e-130 467.6 245 95.5
CARHR229320 Cardamine hirsuta HOM05D003856 ORTHO05D004547 5.8e-130 467.6 248 96.0
BcaC09g51102 Brassica carinata HOM05D003856 ORTHO05D004547 2.9e-129 465.3 248 96.0
A09p26760 Brassica napus HOM05D003856 ORTHO05D004547 6.5e-129 464.2 245 95.1
C09p33910 Brassica napus HOM05D003856 ORTHO05D004547 6.5e-129 464.2 245 95.1
BolC9t56227H Brassica oleracea HOM05D003856 ORTHO05D004547 6.5e-129 464.2 245 95.1
BraA09t38248Z Brassica rapa HOM05D003856 ORTHO05D004547 6.5e-129 464.2 245 95.1
THA.LOC104813601 Tarenaya hassleriana HOM05D003856 ORTHO05D004547 1.1e-128 463.4 247 94.3
BcaC04g21245 Brassica carinata HOM05D003856 ORTHO05D004547 2.5e-128 462.2 245 94.7
CARHR253580 Cardamine hirsuta HOM05D003856 ORTHO05D004547 7.1e-128 460.7 245 94.3
THA.LOC104812995 Tarenaya hassleriana HOM05D003856 ORTHO05D004547 2.7e-127 458.8 245 94.3
BcaB01g01755 Brassica carinata HOM05D003856 ORTHO05D004547 7.9e-127 457.2 245 93.5
Dinv07408 Davidia involucrata HOM05D003856 ORTHO05D004547 1.8e-126 456.1 245 93.1
Thhalv10028913m.g Eutrema salsugineum HOM05D003856 ORTHO05D004547 3.0e-126 455.3 245 93.1
Actinidia02310 Actinidia chinensis HOM05D003856 ORTHO05D004547 6.7e-126 454.1 245 93.5
CANSAT56G3590 Cannabis sativa HOM05D003856 ORTHO05D004547 2.5e-125 452.2 247 91.5
Potri.016G013100 Populus trichocarpa HOM05D003856 ORTHO05D004547 4.3e-125 451.4 245 91.4
Aa31LG9G10060 Aethionema arabicum HOM05D003856 ORTHO05D004547 5.7e-125 451.1 247 91.1
Hma1.2p1_0657F.1_g197110 Hydrangea macrophylla HOM05D003856 ORTHO05D004547 5.7e-125 451.1 245 91.4
Nitab4.5_0004406g0030 Nicotiana tabacum HOM05D003856 ORTHO05D004547 9.7e-125 450.3 245 91.4
QL05p069616 Quercus lobata HOM05D003856 ORTHO05D004547 1.6e-124 449.5 245 90.2
FAN25G1896 Fragaria x ananassa HOM05D003856 ORTHO05D004547 2.2e-124 449.1 247 91.5
FvH4_3g00930 Fragaria vesca HOM05D003856 ORTHO05D004547 2.8e-124 448.7 245 91.8
Lj2A261T38 Lonicera japonica HOM05D003856 ORTHO05D004547 3.7e-124 448.4 245 92.2
Aqoxy1G04060 Aquilegia oxysepala HOM05D003856 ORTHO05D004547 4.8e-124 448.0 245 91.0
Actinidia26855 Actinidia chinensis HOM05D003856 ORTHO05D004547 6.3e-124 447.6 245 91.8
Sp6g04920 Schrenkiella parvula HOM05D003856 ORTHO05D004547 6.3e-124 447.6 245 91.0
Cpa.g.sc75.112 Carica papaya HOM05D003856 ORTHO05D004547 8.2e-124 447.2 245 91.8
RcHm_v2.0_Chr5g0001451 Rosa chinensis HOM05D003856 ORTHO05D004547 8.2e-124 447.2 247 91.9
Thecc.06G233900 Theobroma cacao HOM05D003856 ORTHO05D004547 8.2e-124 447.2 247 90.3
PGR004G0563 Punica granatum HOM05D003856 ORTHO05D004547 1.8e-123 446.0 247 90.3
CiPaw.09G102800 Carya illinoinensis HOM05D003856 ORTHO05D004547 2.4e-123 445.7 247 90.7
Duzib235G1167 Durio zibethinus HOM05D003856 ORTHO05D004547 2.4e-123 445.7 247 90.3
Lsat_1_v5_gn_4_61900 Lactuca sativa HOM05D003856 ORTHO05D004547 2.4e-123 445.7 245 89.4
SalBow8G1854 Salvia bowleyana HOM05D003856 ORTHO05D004547 2.4e-123 445.7 245 90.2
TAR626G0303 Trochodendron aralioides HOM05D003856 ORTHO05D004547 3.1e-123 445.3 245 91.0
Ciclev10016420m.g Citrus clementina HOM05D003856 ORTHO05D004547 4.1e-123 444.9 247 90.7
Manes.08G069500 Manihot esculenta HOM05D003856 ORTHO05D004547 4.1e-123 444.9 245 91.0
Migut.M01400 Erythranthe guttata HOM05D003856 ORTHO05D004547 9.0e-123 443.7 245 90.2
Lalb_Chr02g0149201 Lupinus albus HOM05D003856 ORTHO05D004547 9.0e-123 443.7 245 90.6
Duzib192G0794 Durio zibethinus HOM05D003856 ORTHO05D004547 1.2e-122 443.4 247 89.5
Lj5g0025471 Lotus japonicus HOM05D003856 ORTHO05D004547 1.2e-122 443.4 247 89.5
MBI16_g31714_MAGBIO Magnolia biondii HOM05D003856 ORTHO05D004547 1.2e-122 443.4 247 90.3
TAR627G0499 Trochodendron aralioides HOM05D003856 ORTHO05D004547 1.2e-122 443.4 245 91.0
TAR627G1166 Trochodendron aralioides HOM05D003856 ORTHO05D004547 1.2e-122 443.4 245 91.0
arahy.Tifrunner.gnm1.ann1.B5Z1I8 Arachis hypogaea HOM05D003856 ORTHO05D004547 1.5e-122 443.0 247 89.9
arahy.Tifrunner.gnm1.ann1.ZZ9Q5Y Arachis hypogaea HOM05D003856 ORTHO05D004547 1.5e-122 443.0 247 89.9
CiPaw.10G078300 Carya illinoinensis HOM05D003856 ORTHO05D004547 1.5e-122 443.0 247 89.9
FAN21G0260 Fragaria x ananassa HOM05D003856 ORTHO05D004547 1.5e-122 443.0 252 89.7
Gohir.D10G008800 Gossypium hirsutum HOM05D003856 ORTHO05D004547 1.5e-122 443.0 245 90.2
Gorai.011G009600 Gossypium raimondii HOM05D003856 ORTHO05D004547 1.5e-122 443.0 245 90.2
Glyma.18G075400 Glycine max HOM05D003856 ORTHO05D004547 2.0e-122 442.6 244 90.2
Potri.006G011500 Populus trichocarpa HOM05D003856 ORTHO05D004547 2.0e-122 442.6 245 89.4
arahy.Tifrunner.gnm1.ann1.D1JSNC Arachis hypogaea HOM05D003856 ORTHO05D004547 2.6e-122 442.2 247 89.5
Gohir.A10G009100 Gossypium hirsutum HOM05D003856 ORTHO05D004547 2.6e-122 442.2 245 90.2
Gohir.D10G008700 Gossypium hirsutum HOM05D003856 ORTHO05D004547 2.6e-122 442.2 245 90.2
Gorai.011G009500 Gossypium raimondii HOM05D003856 ORTHO05D004547 2.6e-122 442.2 245 90.2
arahy.Tifrunner.gnm1.ann1.GCV40F Arachis hypogaea HOM05D003856 ORTHO05D004547 3.4e-122 441.8 247 89.1
EL10Ac8g20193 Beta vulgaris HOM05D003856 ORTHO05D004547 3.4e-122 441.8 244 90.6
DCAR_004889 Daucus carota HOM05D003856 ORTHO05D004547 3.4e-122 441.8 245 91.0
MD05G1358200 Malus domestica HOM05D003856 ORTHO05D004547 3.4e-122 441.8 247 89.5
ECA248G1273 Erigeron canadensis HOM05D003856 ORTHO05D004547 4.5e-122 441.4 243 89.3
Nn1g07399 Nelumbo nucifera HOM05D003856 ORTHO05D004547 4.5e-122 441.4 247 90.3
Sc17g0007760 Simmondsia chinensis HOM05D003856 ORTHO05D004547 4.5e-122 441.4 245 89.8
Lsat_1_v5_gn_0_29081 Lactuca sativa HOM05D003856 ORTHO05D004547 5.9e-122 441.0 243 89.3
Prupe.4G009900 Prunus persica HOM05D003856 ORTHO05D004547 5.9e-122 441.0 244 90.2
SalBow1G0666 Salvia bowleyana HOM05D003856 ORTHO05D004547 5.9e-122 441.0 245 89.8
Hund06997 Selenicereus undatus HOM05D003856 ORTHO05D004547 5.9e-122 441.0 245 89.4
Cfa010272 Carpinus fangiana HOM05D003856 ORTHO05D004547 7.7e-122 440.7 245 89.8
HanXRQChr01g0006771 Helianthus annuus HOM05D003856 ORTHO05D004547 7.7e-122 440.7 243 89.3
CAN.G449.18 Capsicum annuum HOM05D003856 ORTHO05D004547 1.0e-121 440.3 246 90.2
Glyma.08G331200 Glycine max HOM05D003856 ORTHO05D004547 1.0e-121 440.3 245 89.4
MD10G1332300 Malus domestica HOM05D003856 ORTHO05D004547 1.0e-121 440.3 247 89.1
Eucgr.D01412 Eucalyptus grandis HOM05D003856 ORTHO05D004547 1.3e-121 439.9 247 88.3
VMungo0540G0895 Vigna mungo HOM05D003856 ORTHO05D004547 1.3e-121 439.9 245 89.0
CSS0032798 Camellia sinensis var. sinensis HOM05D003856 ORTHO05D004547 1.7e-121 439.5 245 90.2
Gohir.A10G009000 Gossypium hirsutum HOM05D003856 ORTHO05D004547 2.2e-121 439.1 245 89.8
Lalb_Chr06g0168331 Lupinus albus HOM05D003856 ORTHO05D004547 2.9e-121 438.7 247 89.1
Sopen05g032590 Solanum pennellii HOM05D003856 ORTHO05D004547 3.8e-121 438.3 246 89.8
PGSC0003DMG400008443 Solanum tuberosum HOM05D003856 ORTHO05D004547 3.8e-121 438.3 246 89.8
Atru.chr1.2436 Acer truncatum HOM05D003856 ORTHO05D004547 5.0e-121 438.0 248 89.1
Atru.chr1.2438 Acer truncatum HOM05D003856 ORTHO05D004547 5.0e-121 438.0 248 89.1
Haze_06930 Corylus avellana HOM05D003856 ORTHO05D004547 5.0e-121 438.0 245 89.0
Phvul.006G059000 Phaseolus vulgaris HOM05D003856 ORTHO05D004547 5.0e-121 438.0 245 89.0
HanXRQChr10g0285161 Helianthus annuus HOM05D003856 ORTHO05D004547 6.5e-121 437.6 243 88.5
SGA_v2.0_scaffold4G01871 Striga asiatica HOM05D003856 ORTHO05D004547 1.1e-120 436.8 244 88.5
Ah.14g087610 Amaranthus hybridus HOM05D003856 ORTHO05D004547 1.4e-120 436.4 245 87.8
Ca_10008_v3 Cicer arietinum L. HOM05D003856 ORTHO05D004547 1.9e-120 436.0 246 88.6
Solyc05g054100.3 Solanum lycopersicum HOM05D003856 ORTHO05D004547 2.5e-120 435.6 246 89.4
TWI38G2230 Tripterygium wilfordii HOM05D003856 ORTHO05D004547 4.2e-120 434.9 246 87.8
Cc09_g00840 Coffea canephora HOM05D003856 ORTHO05D004547 5.5e-120 434.5 246 90.2
CDE04G3203 Ceratophyllum demersum HOM05D003856 ORTHO05D004547 7.2e-120 434.1 245 88.2
CDE06G2351 Ceratophyllum demersum HOM05D003856 ORTHO05D004547 7.2e-120 434.1 245 87.8
CsaV3_1G017260 Cucumis sativus L. HOM05D003856 ORTHO05D004547 9.4e-120 433.7 245 87.3
Rhsim02G0099500 Rhododendron simsii HOM05D003856 ORTHO05D004547 1.2e-119 433.3 269 83.6
Sed0026067 Sechium edule HOM05D003856 ORTHO05D004547 1.2e-119 433.3 245 87.3
ClCG01G010160 Citrullus lanatus HOM05D003856 ORTHO05D004547 1.6e-119 433.0 245 87.3
MSTRG.7166 Avicennia marina HOM05D003856 ORTHO05D004547 7.9e-119 430.6 245 87.8
Sed0028227 Sechium edule HOM05D003856 ORTHO05D004547 1.4e-118 429.9 245 86.5
Psat6g143120 Pisum sativum HOM05D003856 ORTHO05D004547 8.8e-118 427.2 246 87.0
Nitab4.5_0001735g0170 Nicotiana tabacum HOM05D003856 ORTHO05D004547 1.1e-117 426.8 246 88.6
PSO541G3298 Papaver somniferum HOM05D003856 ORTHO05D004547 2.5e-117 425.6 246 87.4
PSO675G7111 Papaver somniferum HOM05D003856 ORTHO05D004547 7.4e-117 424.1 246 87.0
unitig_61.g26092 Utricularia gibba HOM05D003856 ORTHO05D004547 7.4e-117 424.1 260 83.1
DCAR_027821 Daucus carota HOM05D003856 ORTHO05D004547 1.3e-116 423.3 284 78.5
Nn1g03306 Nelumbo nucifera HOM05D003856 ORTHO05D004547 1.8e-115 419.5 235 89.8
Medtr1g079890 Medicago truncatula HOM05D003856 ORTHO05D004547 2.4e-115 419.1 246 85.0
TPR.G32278 Trifolium pratense HOM05D003856 ORTHO05D004547 4.1e-115 418.3 246 85.8
Peaxi162Scf00990g00017 Petunia axillaris HOM05D003856 ORTHO05D004547 2.6e-114 415.6 247 85.4
TWI63G1684 Tripterygium wilfordii HOM05D003856 ORTHO05D004547 5.9e-114 414.5 290 74.5
Zm00001eb102120 Zea mays HOM05D003856 ORTHO05D004547 9.4e-112 407.1 249 82.3
Sabra06G0009100 Salix brachista HOM05D003856 ORTHO05D004547 3.0e-110 402.1 332 66.3
Pp3c11_24600 Physcomitrium patens HOM05D003856 ORTHO05D004547 6.7e-110 401.0 251 79.7
AagrBONN_evm.TU.Sc2ySwM_362.305 Anthoceros agrestis HOM05D003856 ORTHO05D004547 3.3e-109 398.7 245 80.8
Os09g0497400 Oryza sativa ssp. japonica HOM05D003856 ORTHO05D004547 8.2e-108 394.0 249 79.5
Sabra16G0002300 Salix brachista HOM05D003856 ORTHO05D004547 1.1e-107 393.7 214 91.1
Mapoly0029s0061 Marchantia polymorpha HOM05D003856 ORTHO05D004547 3.1e-107 392.1 251 78.1
SMO239G0047 Selaginella moellendorffii HOM05D003856 ORTHO05D004547 3.1e-107 392.1 251 77.3
Pp3c7_950 Physcomitrium patens HOM05D003856 ORTHO05D004547 7.0e-107 391.0 251 76.9
GSVIVG01003331001 Vitis vinifera HOM05D003856 ORTHO05D004547 8.0e-103 377.5 209 88.0
GSVIVG01003337001 Vitis vinifera HOM05D003856 ORTHO05D004547 8.0e-103 377.5 209 88.0
Haze_06937 Corylus avellana HOM05D003856 ORTHO05D004547 1.8e-102 376.3 264 75.0
Oeu009395.1 Olea europaea HOM05D003856 ORTHO05D004547 1.1e-101 373.6 221 84.6
ATR0712G091 Amborella trichopoda HOM05D003856 ORTHO05D004547 5.7e-101 371.3 213 87.3
vmacro15762 Vaccinium macrocarpon HOM05D003856 ORTHO05D004547 1.1e-99 367.1 359 58.5
SHI24455 Sapria himalayana HOM05D003856 ORTHO05D004547 9.1e-91 337.4 245 71.4
Lj1C1240G8 Lonicera japonica HOM05D003856 ORTHO05D004547 3.8e-89 332.0 198 88.4
Gorai.013G129800 Gossypium raimondii HOM05D003856 ORTHO05D004547 6.1e-87 324.7 245 71.4
Nitab4.5_0003626g0020 Nicotiana tabacum HOM05D003856 ORTHO05D004547 1.5e-85 320.1 245 70.6
MELO3C021687.2 Cucumis melo HOM05D003856 ORTHO05D004547 2.0e-82 309.7 179 87.7
AUR62021855 Chenopodium quinoa HOM05D003856 ORTHO05D004547 4.2e-80 302.0 172 90.1
AUR62012797 Chenopodium quinoa HOM05D003856 ORTHO05D004547 2.1e-79 299.7 172 89.5
CSS0048239 Camellia sinensis var. sinensis HOM05D003856 ORTHO05D004547 5.2e-78 295.0 163 89.6
Lalb_Chr21g0311231 Lupinus albus HOM05D003856 ORTHO05D004547 6.8e-78 294.7 166 86.7
HPP92_000415 Vanilla planifolia HOM05D003856 ORTHO05D004547 5.2e-70 268.5 278 54.7
MCO07G661 Micromonas commoda HOM05D003856 ORTHO05D004547 3.1e-62 242.7 241 49.8
SEGI_40422 Sequoiadendron giganteum HOM05D003856 ORTHO05D004547 5.1e-57 225.3 138 81.2
Haze_26609 Corylus avellana HOM05D003856 ORTHO05D004547 1.6e-47 193.7 232 44.0
Cre09.g400400 Chlamydomonas reinhardtii HOM05D003856 ORTHO05D004547 6.2e-47 191.8 247 43.7
Gorai.012G047500 Gossypium raimondii HOM05D003856 ORTHO05D004547 1.4e-46 190.7 245 51.4
MD10G1332200 Malus domestica HOM05D003856 ORTHO05D004547 7.6e-45 184.9 102 88.2
Carub.0007s1888 Capsella rubella HOM05D003856 ORTHO05D004547 1.3e-44 184.1 208 55.8
SEGI_31097 Sequoiadendron giganteum HOM05D003856 ORTHO05D004547 1.1e-40 171.0 94 89.4
CSS0021523 Camellia sinensis var. sinensis HOM05D003856 ORTHO05D004547 1.6e-34 150.6 163 54.6
CARHR290760 Cardamine hirsuta HOM05D003856 ORTHO05D004547 1.9e-32 143.7 87 83.9
AL649U10020 Arabidopsis lyrata HOM05D003856 ORTHO05D004547 7.3e-32 141.7 82 90.2
COL.COLO4_31891 Corchorus olitorius HOM05D003856 ORTHO05D004547 6.2e-31 138.7 141 56.0
C01p16690 Brassica napus HOM05D003856 ORTHO05D004547 2.4e-30 136.7 84 82.1
Carub.0008s0836 Capsella rubella HOM05D003856 ORTHO05D004547 2.0e-29 133.7 212 46.2
Lalb_Chr21g0311241 Lupinus albus HOM05D003856 ORTHO05D004547 2.0e-29 133.7 82 81.7
PRCOL_00006309 Prasinoderma coloniale HOM05D003856 ORTHO05D004547 2.1e-26 123.6 232 37.1
CBR_g38137 Chara braunii HOM05D003856 ORTHO05D004547 4.2e-19 99.4 99 49.5
COL.COLO4_31890 Corchorus olitorius HOM05D003856 ORTHO05D004547 1.1e-16 91.3 57 82.5
Migut.L00276 Erythranthe guttata HOM05D003856 ORTHO05D004547 3.3e-16 89.7 51 82.4
vmacro04321 Vaccinium macrocarpon HOM05D004428 ORTHO05D013648 1.1e-14 84.7 74 66.2
HPP92_000455 Vanilla planifolia HOM05D003856 ORTHO05D004547 1.4e-14 84.3 51 84.3
Dinv13969 Davidia involucrata HOM05D003856 ORTHO05D004547 4.1e-14 82.8 79 59.5
Hund21152 Selenicereus undatus HOM05D003856 ORTHO05D004547 1.2e-13 81.3 47 76.6
Oeu040759.1 Olea europaea HOM05D003856 ORTHO05D004547 1.5e-13 80.9 52 84.6
vmacro16921 Vaccinium macrocarpon HOM05D000007 ORTHO05D013648 8.4e-12 75.1 112 49.1
Ah.14g078790 Amaranthus hybridus HOM05D006286 ORTHO05D007741 7.2e-11 72.0 38 86.8
Rhsim07G0218800 Rhododendron simsii HOM05D003856 ORTHO05D013648 7.2e-11 72.0 90 53.3
FAN07G2353 Fragaria x ananassa HOM05D003856 ORTHO05D004547 3.9e-09 66.2 45 77.8
Rhsim07G0218900 Rhododendron simsii HOM05D003856 ORTHO05D013648 4.3e-08 62.8 98 48.0
A05p11440 Brassica napus HOM05D003856 ORTHO05D004547 9.7e-08 61.6 36 80.6
BraA05t20093Z Brassica rapa HOM05D003856 ORTHO05D004547 9.7e-08 61.6 36 80.6
C04p14930 Brassica napus HOM05D003856 ORTHO05D004547 2.8e-07 60.1 36 77.8
vmacro22601 Vaccinium macrocarpon HOM05D003856 ORTHO05D426869 2.8e-07 60.1 90 48.9


User provided reference genes

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