Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaB03g11704 Brassica carinata HOM05D008952 ORTHO05D011481 1.0e-56 224.6 300 100.0
A08p15360 Brassica napus HOM05D008952 ORTHO05D011481 9.8e-47 191.4 300 79.0
BcaC01g00723 Brassica carinata HOM05D008952 ORTHO05D011481 2.0e-39 167.2 285 80.4
Thhalv10027342m.g Eutrema salsugineum HOM05D008952 ORTHO05D011481 9.8e-39 164.9 300 73.3
C03p83630 Brassica napus HOM05D008952 ORTHO05D011481 2.9e-38 163.3 285 80.4
Sp7g19070 Schrenkiella parvula HOM05D008952 ORTHO05D011481 5.4e-37 159.1 300 75.3
A01p12370 Brassica napus HOM05D008952 ORTHO05D011481 5.1e-35 152.5 300 79.7
BcaNung04710 Brassica carinata HOM05D008952 ORTHO05D011481 4.0e-32 142.9 300 71.7
Carub.0007s2042 Capsella rubella HOM05D008952 ORTHO05D011481 7.6e-31 138.7 300 68.7
BraA01t01182Z Brassica rapa HOM05D008952 ORTHO05D011481 8.4e-30 135.2 300 76.3
BcaC09g51279 Brassica carinata HOM05D008952 ORTHO05D011481 1.4e-29 134.4 90 80.0
C01p14890 Brassica napus HOM05D008952 ORTHO05D011481 1.4e-29 134.4 90 80.0
BolC1t01436H Brassica oleracea HOM05D008952 ORTHO05D011481 1.4e-29 134.4 90 80.0
AL7G33130 Arabidopsis lyrata HOM05D008952 ORTHO05D011481 1.6e-25 120.9 300 76.0
AT4G21020 Arabidopsis thaliana HOM05D008952 ORTHO05D011481 3.1e-24 116.7 300 75.0
CARHR227600 Cardamine hirsuta HOM05D008952 ORTHO05D011481 4.0e-24 116.3 300 57.0
Carub.0008s0421 Capsella rubella HOM05D008952 ORTHO05D011481 7.3e-18 95.5 86 65.1
Aa31LG6G3060 Aethionema arabicum HOM05D008952 ORTHO05D011481 6.2e-17 92.4 300 66.3
AT5G44310 Arabidopsis thaliana HOM05D008952 ORTHO05D011481 8.1e-17 92.0 89 61.8
Thhalv10003385m.g Eutrema salsugineum HOM05D008952 ORTHO05D011481 5.3e-16 89.4 92 59.8
AL8G15670 Arabidopsis lyrata HOM05D008952 ORTHO05D011481 1.2e-15 88.2 84 63.1
CARHR178870 Cardamine hirsuta HOM05D008952 ORTHO05D011481 3.4e-15 86.7 86 60.5
BcaB07g30953 Brassica carinata HOM05D008952 ORTHO05D011481 2.1e-12 77.4 86 59.3
BcaC04g21842 Brassica carinata HOM05D008952 ORTHO05D011481 1.3e-11 74.7 94 56.4
BraA09t37703Z Brassica rapa HOM05D008952 ORTHO05D011481 1.3e-11 74.7 86 57.0
THA.LOC104824877 Tarenaya hassleriana HOM05D008952 ORTHO05D011481 1.8e-11 74.3 114 43.0
Sp2g09140 Schrenkiella parvula HOM05D008952 ORTHO05D011481 3.0e-11 73.6 87 57.5
A09p21040 Brassica napus HOM05D008952 ORTHO05D011481 8.7e-11 72.0 86 55.8
C09p26780 Brassica napus HOM05D008952 ORTHO05D011481 1.1e-10 71.6 87 54.0
BolC9t55566H Brassica oleracea HOM05D008952 ORTHO05D011481 1.1e-10 71.6 87 54.0
Aa31LG9G8860 Aethionema arabicum HOM05D000051 ORTHO05D000015 1.5e-10 71.2 84 53.6
BcaB07g30533 Brassica carinata HOM05D008952 ORTHO05D011481 4.5e-07 59.7 80 51.2
C02p44920 Brassica napus HOM05D008952 ORTHO05D021944 4.5e-07 59.7 92 50.0
CARHR036340 Cardamine hirsuta HOM05D008952 ORTHO05D011481 5.8e-07 59.3 86 46.5
A02p28340 Brassica napus HOM05D008952 ORTHO05D021944 3.8e-06 56.6 74 54.1
BraA02t07870Z Brassica rapa HOM05D008952 ORTHO05D021944 3.8e-06 56.6 74 54.1
Ciclev10018298m.g Citrus clementina HOM05D032138 ORTHO05D011264 6.4e-06 55.8 95 38.9


User provided reference genes

Program Settings