Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaB03g11570 Brassica carinata HOM05D009742 ORTHO05D016608 1.8e-37 158.7 76 100.0
BcaC01g04263 Brassica carinata HOM05D009742 ORTHO05D016608 1.1e-31 139.4 74 86.5
BolC3t16602H Brassica oleracea HOM05D009742 ORTHO05D016608 1.9e-31 138.7 76 85.5
A03p35670 Brassica napus HOM05D009742 ORTHO05D016608 7.3e-31 136.7 78 85.9
BraA03t12742Z Brassica rapa HOM05D009742 ORTHO05D016608 7.3e-31 136.7 78 85.9
AL3G21530 Arabidopsis lyrata HOM05D009742 ORTHO05D016608 4.9e-27 124.0 75 73.3
Thhalv10022345m.g Eutrema salsugineum HOM05D009742 ORTHO05D016608 9.2e-26 119.8 73 72.6
Carub.0003s0936 Capsella rubella HOM05D009742 ORTHO05D016608 4.3e-23 110.9 61 77.0
AT3G10195 Arabidopsis thaliana HOM05D009742 ORTHO05D016608 2.1e-22 108.6 78 67.9
CARHR084680 Cardamine hirsuta HOM05D009742 ORTHO05D016608 4.7e-22 107.5 79 67.1
BcaC09g48109 Brassica carinata HOM05D009742 ORTHO05D024001 2.3e-16 88.6 79 55.7
BolC1t05415H Brassica oleracea HOM05D009742 ORTHO05D024001 2.3e-16 88.6 79 55.7
BcaB04g21224 Brassica carinata HOM05D009742 ORTHO05D024001 5.6e-15 84.0 78 55.1
A01p42000 Brassica napus HOM05D009742 ORTHO05D024001 5.6e-15 84.0 79 54.4
BraA01t04268Z Brassica rapa HOM05D009742 ORTHO05D024001 5.6e-15 84.0 79 54.4
BolC1t05417H Brassica oleracea HOM05D009742 ORTHO05D039915 3.1e-13 78.2 82 54.9
C03p43320 Brassica napus HOM05D009742 ORTHO05D097810 2.6e-12 75.1 54 68.5
BcaC09g48110 Brassica carinata HOM05D009742 ORTHO05D032499 2.3e-08 62.0 74 45.9
BcaB04g21223 Brassica carinata HOM05D009742 ORTHO05D024321 2.5e-07 58.5 74 44.6
BcaC09g48112 Brassica carinata HOM05D009742 ORTHO05D039915 2.5e-07 58.5 65 52.3
A01p42010 Brassica napus HOM05D009742 ORTHO05D032499 9.6e-07 56.6 74 45.9
BraA01t04269Z Brassica rapa HOM05D009742 ORTHO05D032499 9.6e-07 56.6 74 45.9
BcaB04g21226 Brassica carinata HOM05D009742 ORTHO05D092332 3.6e-06 54.7 66 50.0


User provided reference genes

Program Settings