Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaB02g11533 Brassica carinata HOM05D004703 ORTHO05D005801 3.0e-108 395.2 200 100.0
BcaB01g01695 Brassica carinata HOM05D004703 ORTHO05D005801 3.0e-68 262.3 231 65.8
BcaC04g21182 Brassica carinata HOM05D004703 ORTHO05D005801 7.4e-67 257.7 231 64.5
C09p34490 Brassica napus HOM05D004703 ORTHO05D005801 7.4e-67 257.7 231 64.5
BolC9t56293H Brassica oleracea HOM05D004703 ORTHO05D005801 7.4e-67 257.7 231 64.5
Thhalv10028825m.g Eutrema salsugineum HOM05D004703 ORTHO05D005801 2.4e-65 252.7 231 64.5
A09p27170 Brassica napus HOM05D004703 ORTHO05D005801 7.7e-64 247.7 261 57.1
AL6G46750 Arabidopsis lyrata HOM05D004703 ORTHO05D005801 8.5e-63 244.2 231 62.3
CARHR254310 Cardamine hirsuta HOM05D004703 ORTHO05D005801 3.2e-62 242.3 228 61.8
Carub.0006s3108 Capsella rubella HOM05D004703 ORTHO05D005801 1.2e-61 240.4 228 61.4
AT4G11980 Arabidopsis thaliana HOM05D004703 ORTHO05D005801 1.6e-61 240.0 263 57.4
BcaB04g18565 Brassica carinata HOM05D004703 ORTHO05D005801 6.1e-61 238.0 174 77.0
BcaB02g09202 Brassica carinata HOM05D004703 ORTHO05D005801 2.3e-60 236.1 174 76.4
arahy.Tifrunner.gnm1.ann1.TVWC12 Arachis hypogaea HOM05D004703 ORTHO05D005801 5.9e-56 221.5 221 56.6
THA.LOC104806355 Tarenaya hassleriana HOM05D004703 ORTHO05D005801 1.0e-55 220.7 232 56.9
Atru.chr9.1491 Acer truncatum HOM05D004703 ORTHO05D005801 7.2e-54 214.5 229 55.0
VMungo0251G1252 Vigna mungo HOM05D004703 ORTHO05D005801 3.0e-52 209.1 229 52.0
Haze_09002 Corylus avellana HOM05D004703 ORTHO05D005801 2.6e-51 206.1 228 52.6
Lj4g0003091 Lotus japonicus HOM05D004703 ORTHO05D005801 2.6e-51 206.1 228 52.2
Aa31LG9G10490 Aethionema arabicum HOM05D004703 ORTHO05D005801 3.4e-51 205.7 211 56.4
Phvul.003G216900 Phaseolus vulgaris HOM05D004703 ORTHO05D005801 3.4e-51 205.7 229 52.4
arahy.Tifrunner.gnm1.ann1.RRY62Q Arachis hypogaea HOM05D004703 ORTHO05D005801 5.7e-51 204.9 228 52.6
Glyma.05G054900 Glycine max HOM05D004703 ORTHO05D005801 5.7e-51 204.9 229 52.4
Ciclev10021310m.g Citrus clementina HOM05D004703 ORTHO05D005801 7.5e-51 204.5 229 52.8
Glyma.05G054800 Glycine max HOM05D004703 ORTHO05D005801 9.8e-51 204.1 228 51.8
unitig_22.g5479 Utricularia gibba HOM05D004703 ORTHO05D005801 1.3e-50 203.8 227 50.2
PGR042G1634 Punica granatum HOM05D004703 ORTHO05D005801 2.8e-50 202.6 228 51.3
TAR629G2760 Trochodendron aralioides HOM05D004703 ORTHO05D005801 2.8e-50 202.6 230 52.2
Eucgr.E00504 Eucalyptus grandis HOM05D004703 ORTHO05D005801 3.7e-50 202.2 228 51.3
Lalb_Chr05g0225211 Lupinus albus HOM05D004703 ORTHO05D005801 3.7e-50 202.2 228 51.8
PGSC0003DMG400003941 Solanum tuberosum HOM05D004703 ORTHO05D005801 3.7e-50 202.2 228 51.8
COL.COLO4_23815 Corchorus olitorius HOM05D004703 ORTHO05D005801 4.8e-50 201.8 228 53.5
FvH4_5g01080 Fragaria vesca HOM05D004703 ORTHO05D005801 8.3e-50 201.1 228 51.3
FAN18G3460 Fragaria x ananassa HOM05D004703 ORTHO05D005801 8.3e-50 201.1 228 51.8
Ca_12294_v3 Cicer arietinum L. HOM05D004703 ORTHO05D005801 1.8e-49 199.9 229 51.5
RcHm_v2.0_Chr7g0200241 Rosa chinensis HOM05D004703 ORTHO05D005801 1.8e-49 199.9 228 50.9
CANSAT21G0478 Cannabis sativa HOM05D004703 ORTHO05D005801 5.4e-49 198.4 227 51.5
Cc08_g13610 Coffea canephora HOM05D004703 ORTHO05D005801 5.4e-49 198.4 228 50.9
FAN13G0401 Fragaria x ananassa HOM05D004703 ORTHO05D005801 5.4e-49 198.4 228 50.9
Sopen08g028180 Solanum pennellii HOM05D004703 ORTHO05D005801 7.0e-49 198.0 227 51.1
Manes.01G070700 Manihot esculenta HOM05D004703 ORTHO05D005801 9.1e-49 197.6 229 52.0
CAN.G630.24 Capsicum annuum HOM05D004703 ORTHO05D005801 1.2e-48 197.2 229 49.8
Migut.A00879 Erythranthe guttata HOM05D004703 ORTHO05D005801 1.2e-48 197.2 229 49.3
MBI04_g28556_MAGBIO Magnolia biondii HOM05D004703 ORTHO05D005801 1.2e-48 197.2 228 50.9
Nitab4.5_0005167g0040 Nicotiana tabacum HOM05D004703 ORTHO05D005801 1.2e-48 197.2 228 50.4
Nitab4.5_0012494g0020 Nicotiana tabacum HOM05D004703 ORTHO05D005801 1.2e-48 197.2 228 50.4
Hma1.2p1_0138F.1_g062820 Hydrangea macrophylla HOM05D004703 ORTHO05D005801 1.6e-48 196.8 228 50.9
Psat4g069480 Pisum sativum HOM05D004703 ORTHO05D005801 1.6e-48 196.8 247 49.0
QL12p016126 Quercus lobata HOM05D004703 ORTHO05D005801 1.6e-48 196.8 227 51.1
QL12p016291 Quercus lobata HOM05D004703 ORTHO05D005801 1.6e-48 196.8 227 51.1
Solyc08g079820.3 Solanum lycopersicum HOM05D004703 ORTHO05D005801 2.0e-48 196.4 227 51.1
Actinidia14493 Actinidia chinensis HOM05D004703 ORTHO05D005801 4.5e-48 195.3 228 49.6
Lj2A203G54 Lonicera japonica HOM05D004703 ORTHO05D005801 4.5e-48 195.3 225 51.1
Thecc.03G266100 Theobroma cacao HOM05D004703 ORTHO05D005801 4.5e-48 195.3 228 51.3
Medtr4g101830 Medicago truncatula HOM05D004703 ORTHO05D005801 5.9e-48 194.9 229 50.7
CSS0006775 Camellia sinensis var. sinensis HOM05D004703 ORTHO05D005801 7.7e-48 194.5 228 51.8
DCAR_006785 Daucus carota HOM05D004703 ORTHO05D005801 1.0e-47 194.1 259 47.5
Potri.003G118300 Populus trichocarpa HOM05D004703 ORTHO05D005801 1.0e-47 194.1 228 52.2
CsaV3_5G003450 Cucumis sativus L. HOM05D004703 ORTHO05D005801 1.3e-47 193.7 229 50.7
Dinv37721 Davidia involucrata HOM05D004703 ORTHO05D005801 1.7e-47 193.4 228 50.9
TPR.G37619 Trifolium pratense HOM05D004703 ORTHO05D005801 2.3e-47 193.0 229 49.8
TWI15G0205 Tripterygium wilfordii HOM05D004703 ORTHO05D005801 2.3e-47 193.0 228 50.4
CiPaw.11G143800 Carya illinoinensis HOM05D004703 ORTHO05D005801 3.8e-47 192.2 228 49.6
Prupe.5G084800 Prunus persica HOM05D004703 ORTHO05D005801 3.8e-47 192.2 228 50.0
CDE04G3458 Ceratophyllum demersum HOM05D004703 ORTHO05D005801 5.0e-47 191.8 228 48.7
Os06g0129700 Oryza sativa ssp. japonica HOM05D004703 ORTHO05D005801 5.0e-47 191.8 229 48.0
Oeu001909.1 Olea europaea HOM05D004703 ORTHO05D005801 6.5e-47 191.4 228 49.1
SGA_v2.0_scaffold37G14871 Striga asiatica HOM05D004703 ORTHO05D005801 8.6e-47 191.0 229 48.0
Duzib084G1157 Durio zibethinus HOM05D004703 ORTHO05D005801 1.5e-46 190.3 228 50.0
Lsat_1_v5_gn_6_10661 Lactuca sativa HOM05D004703 ORTHO05D005801 1.5e-46 190.3 228 49.1
MD04G1073000 Malus domestica HOM05D004703 ORTHO05D005801 1.9e-46 189.9 228 49.6
Hund14696 Selenicereus undatus HOM05D004703 ORTHO05D005801 1.9e-46 189.9 228 49.6
Ah.12g053460 Amaranthus hybridus HOM05D004703 ORTHO05D005801 2.5e-46 189.5 229 47.6
Ah.12g057950 Amaranthus hybridus HOM05D004703 ORTHO05D005801 2.5e-46 189.5 229 47.6
AUR62010550 Chenopodium quinoa HOM05D004703 ORTHO05D005801 2.5e-46 189.5 227 49.3
AUR62017343 Chenopodium quinoa HOM05D004703 ORTHO05D005801 2.5e-46 189.5 225 49.3
Sed0028019 Sechium edule HOM05D004703 ORTHO05D005801 4.2e-46 188.7 229 49.3
EL10Ac5g12672 Beta vulgaris HOM05D004703 ORTHO05D005801 5.5e-46 188.3 227 48.5
ECA233G5834 Erigeron canadensis HOM05D004703 ORTHO05D005801 9.5e-46 187.6 228 49.1
Peaxi162Scf00620g00231 Petunia axillaris HOM05D004703 ORTHO05D005801 1.6e-45 186.8 252 45.6
Ah.02g116260 Amaranthus hybridus HOM05D004703 ORTHO05D005801 2.1e-45 186.4 228 47.4
VMungo0251G1928 Vigna mungo HOM05D004703 ORTHO05D005801 2.1e-45 186.4 279 41.9
Aqoxy7G00537 Aquilegia oxysepala HOM05D004703 ORTHO05D005801 2.8e-45 186.0 260 46.5
Gorai.006G210900 Gossypium raimondii HOM05D004703 ORTHO05D005801 2.8e-45 186.0 228 49.1
Gohir.A09G193900 Gossypium hirsutum HOM05D004703 ORTHO05D005801 3.6e-45 185.7 228 48.7
CSS0042147 Camellia sinensis var. sinensis HOM05D004703 ORTHO05D005801 8.0e-45 184.5 228 49.6
Gohir.D09G188100 Gossypium hirsutum HOM05D004703 ORTHO05D005801 8.0e-45 184.5 228 49.1
Rhsim08G0184400 Rhododendron simsii HOM05D004703 ORTHO05D005801 8.0e-45 184.5 228 51.3
Cpa.g.sc29.48 Carica papaya HOM05D004703 ORTHO05D005801 1.0e-44 184.1 174 59.8
HanXRQChr07g0186971 Helianthus annuus HOM05D004703 ORTHO05D005801 1.0e-44 184.1 228 48.7
HPP92_020651 Vanilla planifolia HOM05D004703 ORTHO05D005801 1.0e-44 184.1 263 45.2
GSVIVG01019903001 Vitis vinifera HOM05D004703 ORTHO05D005801 1.4e-44 183.7 228 47.4
PSO782G3959 Papaver somniferum HOM05D004703 ORTHO05D005801 5.2e-44 181.8 229 47.2
PSO478G3534 Papaver somniferum HOM05D004703 ORTHO05D005801 8.9e-44 181.0 229 46.7
Sabra03G0082300 Salix brachista HOM05D004703 ORTHO05D005801 8.9e-44 181.0 244 47.1
PSO478G3008 Papaver somniferum HOM05D004703 ORTHO05D005801 1.5e-43 180.3 238 45.4
RcHm_v2.0_Chr6g0265101 Rosa chinensis HOM05D004703 ORTHO05D005801 2.0e-43 179.9 228 47.4
RcHm_v2.0_Chr6g0265181 Rosa chinensis HOM05D004703 ORTHO05D005801 2.0e-43 179.9 228 47.4
ClCG01G003390 Citrullus lanatus HOM05D004703 ORTHO05D005801 5.7e-43 178.3 245 45.3
SalBow6G2643 Salvia bowleyana HOM05D004703 ORTHO05D005801 8.3e-42 174.5 178 56.2
CBR_g30593 Chara braunii HOM05D004703 ORTHO05D005801 1.0e-36 157.5 174 49.4
FAN08G2483 Fragaria x ananassa HOM05D004703 ORTHO05D005801 5.8e-35 151.8 209 46.9
MELO3C005608.2 Cucumis melo HOM05D004703 ORTHO05D005801 7.5e-35 151.4 330 34.5
Mapoly0093s0020 Marchantia polymorpha HOM05D004703 ORTHO05D005801 1.3e-34 150.6 231 41.1
Pp3c15_11750 Physcomitrium patens HOM05D004703 ORTHO05D005801 3.5e-32 142.5 250 38.0
SMO140G0070 Selaginella moellendorffii HOM05D004703 ORTHO05D005801 1.0e-31 141.0 174 47.1
arahy.Tifrunner.gnm1.ann1.DGE7ZD Arachis hypogaea HOM05D004703 ORTHO05D005801 1.6e-29 133.7 146 58.9
arahy.Tifrunner.gnm1.ann1.WGQ9HG Arachis hypogaea HOM05D004703 ORTHO05D005801 3.1e-28 129.4 95 74.7
Sp6g05530 Schrenkiella parvula HOM05D004703 ORTHO05D005801 3.1e-28 129.4 135 59.3
arahy.Tifrunner.gnm1.ann1.QV6CQV Arachis hypogaea HOM05D004703 ORTHO05D005801 4.0e-28 129.0 94 74.5
arahy.Tifrunner.gnm1.ann1.0W2QGA Arachis hypogaea HOM05D004703 ORTHO05D005801 5.2e-28 128.6 95 73.7
arahy.Tifrunner.gnm1.ann1.QD9SPH Arachis hypogaea HOM05D004703 ORTHO05D005801 1.2e-27 127.5 95 72.6
BcaC01g04204 Brassica carinata HOM05D004703 ORTHO05D005801 1.5e-27 127.1 118 64.4
arahy.Tifrunner.gnm1.ann1.7IH5G2 Arachis hypogaea HOM05D004703 ORTHO05D005801 2.0e-27 126.7 95 72.6
arahy.Tifrunner.gnm1.ann1.R8Q162 Arachis hypogaea HOM05D004703 ORTHO05D005801 2.0e-27 126.7 95 71.6
arahy.Tifrunner.gnm1.ann1.U0A30G Arachis hypogaea HOM05D004703 ORTHO05D005801 7.5e-27 124.8 125 61.6
arahy.Tifrunner.gnm1.ann1.KBZV3C Arachis hypogaea HOM05D004703 ORTHO05D005801 9.8e-27 124.4 95 71.6
arahy.Tifrunner.gnm1.ann1.QT2LTC Arachis hypogaea HOM05D004703 ORTHO05D005801 9.8e-27 124.4 95 71.6
arahy.Tifrunner.gnm1.ann1.J3Q2MP Arachis hypogaea HOM05D004703 ORTHO05D005801 1.3e-26 124.0 95 70.5
arahy.Tifrunner.gnm1.ann1.TN8QBF Arachis hypogaea HOM05D004703 ORTHO05D005801 2.4e-25 119.8 95 71.6
Haze_13993 Corylus avellana HOM05D004703 ORTHO05D005801 4.1e-25 119.0 134 54.5
Sc07g0009460 Simmondsia chinensis HOM05D004703 ORTHO05D005801 1.6e-24 117.1 151 51.7
RcHm_v2.0_Chr4g0403961 Rosa chinensis HOM05D004703 ORTHO05D005801 1.7e-23 113.6 121 55.4
Zm00001eb378400 Zea mays HOM05D004703 ORTHO05D005801 3.0e-23 112.8 154 50.6
arahy.Tifrunner.gnm1.ann1.HPWZ3I Arachis hypogaea HOM05D004703 ORTHO05D005801 1.9e-22 110.2 121 56.2
Nn1g00505 Nelumbo nucifera HOM05D004703 ORTHO05D005801 2.5e-22 109.8 132 50.8
vmacro19246 Vaccinium macrocarpon HOM05D004703 ORTHO05D005801 7.3e-22 108.2 153 49.7
arahy.Tifrunner.gnm1.ann1.EX0EXI Arachis hypogaea HOM05D004703 ORTHO05D005801 1.6e-21 107.1 97 63.9
RcHm_v2.0_Chr0c37g0502981 Rosa chinensis HOM05D004703 ORTHO05D005801 1.4e-20 104.0 170 42.9
arahy.Tifrunner.gnm1.ann1.0PA3BU Arachis hypogaea HOM05D004703 ORTHO05D005801 5.2e-20 102.1 80 71.2
ATR0905G001 Amborella trichopoda HOM05D004703 ORTHO05D005801 6.8e-20 101.7 122 45.1
vmacro19247 Vaccinium macrocarpon HOM05D004703 ORTHO05D005801 2.0e-19 100.1 75 62.7
arahy.Tifrunner.gnm1.ann1.UX21TB Arachis hypogaea HOM05D004703 ORTHO05D005801 3.4e-19 99.4 76 73.7
arahy.Tifrunner.gnm1.ann1.YD44XK Arachis hypogaea HOM05D004703 ORTHO05D005801 3.4e-19 99.4 76 73.7
arahy.Tifrunner.gnm1.ann1.2KDH9Q Arachis hypogaea HOM05D004703 ORTHO05D005801 4.1e-17 92.4 61 80.3
Zm00001eb279110 Zea mays HOM05D004703 ORTHO05D005801 5.4e-17 92.0 99 59.6
arahy.Tifrunner.gnm1.ann1.XKXY1P Arachis hypogaea HOM05D004703 ORTHO05D005801 6.0e-16 88.6 66 74.2
MSTRG.25560 Avicennia marina HOM05D004703 ORTHO05D005801 1.0e-15 87.8 67 73.1
arahy.Tifrunner.gnm1.ann1.4J0L4L Arachis hypogaea HOM05D004703 ORTHO05D005801 2.3e-15 86.7 72 69.4
Zm00001eb113910 Zea mays HOM05D004703 ORTHO05D005801 2.3e-15 86.7 100 58.0
arahy.Tifrunner.gnm1.ann1.L680XF Arachis hypogaea HOM05D004703 ORTHO05D005801 1.5e-14 84.0 80 60.0
RcHm_v2.0_Chr4g0425481 Rosa chinensis HOM05D004703 ORTHO05D005801 4.3e-14 82.4 116 46.6
AagrBONN_evm.TU.Sc2ySwM_344.4389 Anthoceros agrestis HOM05D004703 ORTHO05D005801 9.5e-14 81.3 79 58.2
arahy.Tifrunner.gnm1.ann1.DQS0N1 Arachis hypogaea HOM05D004703 ORTHO05D005801 1.6e-13 80.5 91 53.8
arahy.Tifrunner.gnm1.ann1.RAR2PQ Arachis hypogaea HOM05D004703 ORTHO05D030873 2.7e-08 63.2 120 36.7
ATR0251G001 Amborella trichopoda HOM05D004703 ORTHO05D005801 7.8e-08 61.6 88 42.0
Cfa024731 Carpinus fangiana HOM05D004703 ORTHO05D005801 1.3e-07 60.8 192 28.6
arahy.Tifrunner.gnm1.ann1.IA6KQS Arachis hypogaea HOM05D004703 ORTHO05D005801 3.9e-07 59.3 47 66.0
CSS0004055 Camellia sinensis var. sinensis HOM05D004703 ORTHO05D005801 4.3e-06 55.8 43 72.1


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