Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaB02g11518 Brassica carinata HOM05D001224 ORTHO05D000395 1.3e-238 829.3 404 100.0
BcaB04g17772 Brassica carinata HOM05D001224 ORTHO05D010571 2.8e-28 130.6 333 34.5
BcaB05g22438 Brassica carinata HOM05D001224 ORTHO05D095127 3.1e-19 100.5 185 40.0
BcaB06g26645 Brassica carinata HOM05D001224 ORTHO05D010571 3.2e-16 90.5 77 64.9
BcaB06g27849 Brassica carinata HOM05D001224 ORTHO05D091028 4.3e-13 80.1 72 62.5
C03p68610 Brassica napus HOM05D000675 ORTHO05D000395 4.0e-11 73.6 82 52.4
BolC3t19120H Brassica oleracea HOM05D000675 ORTHO05D000395 4.0e-11 73.6 82 52.4
BolC4t23819H Brassica oleracea HOM05D002776 ORTHO05D000395 1.5e-10 71.6 69 59.4
BcaB01g02585 Brassica carinata HOM05D001224 ORTHO05D000395 7.6e-10 69.3 74 56.8
BolC4t22590H Brassica oleracea HOM05D002776 ORTHO05D016111 7.6e-10 69.3 75 53.3
BcaB06g26474 Brassica carinata HOM05D001224 ORTHO05D095885 3.8e-09 67.0 83 50.6
BcaC05g27135 Brassica carinata HOM05D001224 ORTHO05D010571 3.8e-09 67.0 109 45.9
BcaB06g25741 Brassica carinata HOM05D001224 ORTHO05D016074 4.9e-09 66.6 100 45.0
BcaB08g35078 Brassica carinata HOM05D001224 ORTHO05D016074 8.4e-09 65.9 167 32.9
BcaC02g11120 Brassica carinata HOM05D001224 ORTHO05D010571 8.4e-09 65.9 74 54.1
BolC4t26388H Brassica oleracea HOM05D001224 ORTHO05D000395 8.4e-09 65.9 74 54.1
BraA01t01571Z Brassica rapa HOM05D000675 ORTHO05D000395 8.4e-09 65.9 74 54.1
C05p45370 Brassica napus HOM05D000675 ORTHO05D000395 1.1e-08 65.5 74 52.7
C04p20840 Brassica napus HOM05D000675 ORTHO05D012331 1.4e-08 65.1 74 50.0
C07p06250 Brassica napus HOM05D000675 ORTHO05D000395 1.9e-08 64.7 73 53.4
BolC7t41043H Brassica oleracea HOM05D000675 ORTHO05D000395 1.9e-08 64.7 73 53.4
C04p35160 Brassica napus HOM05D000675 ORTHO05D000395 2.4e-08 64.3 74 54.1
C05p42010 Brassica napus HOM05D000675 ORTHO05D000395 2.4e-08 64.3 74 52.7
BolC6t35441H Brassica oleracea HOM05D001224 ORTHO05D003542 2.4e-08 64.3 74 52.7
BraSC37t46113Z Brassica rapa HOM05D000675 ORTHO05D000395 2.4e-08 64.3 74 54.1
BolC4t23614H Brassica oleracea HOM05D000675 ORTHO05D012331 4.2e-08 63.5 74 48.6
BcaC07g37040 Brassica carinata HOM05D001224 ORTHO05D010571 5.4e-08 63.2 74 52.7
BolC1t04758H Brassica oleracea HOM05D000675 ORTHO05D000395 5.4e-08 63.2 74 52.7
C05p37770 Brassica napus HOM05D000675 ORTHO05D000395 7.1e-08 62.8 74 51.4
BolC7t41308H Brassica oleracea HOM05D000675 ORTHO05D000395 7.1e-08 62.8 74 52.7
BraA01t02479Z Brassica rapa HOM05D000675 ORTHO05D000395 1.2e-07 62.0 74 51.4
BcaB06g27850 Brassica carinata HOM05D001224 ORTHO05D016074 2.1e-07 61.2 50 66.0
BraA07t28367Z Brassica rapa HOM05D000675 ORTHO05D000395 2.1e-07 61.2 74 51.4
BraA06t25345Z Brassica rapa HOM05D000675 ORTHO05D000395 6.0e-07 59.7 74 51.4
C05p42060 Brassica napus HOM05D002776 ORTHO05D000395 7.8e-07 59.3 75 49.3
BcaB02g11183 Brassica carinata HOM05D001224 ORTHO05D016074 1.0e-06 58.9 42 69.0
BcaB04g17705 Brassica carinata HOM05D001224 ORTHO05D016074 1.0e-06 58.9 42 69.0
BcaB06g25737 Brassica carinata HOM05D001224 ORTHO05D016074 1.0e-06 58.9 42 69.0
BcaC04g20542 Brassica carinata HOM05D002776 ORTHO05D012331 1.0e-06 58.9 60 48.3
A07p05870 Brassica napus HOM05D000675 ORTHO05D000395 1.0e-06 58.9 74 50.0
BolC6t35536H Brassica oleracea HOM05D000675 ORTHO05D000395 1.7e-06 58.2 73 49.3
BcaC02g11069 Brassica carinata HOM05D002776 ORTHO05D012331 2.3e-06 57.8 60 48.3
BcaB02g10769 Brassica carinata HOM05D002776 ORTHO05D012331 3.9e-06 57.0 60 48.3


User provided reference genes

Program Settings