Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaB02g11474 Brassica carinata HOM05D000589 ORTHO05D013242 4.6e-92 341.3 178 100.0
BcaB05g23573 Brassica carinata HOM05D000589 ORTHO05D013242 3.9e-67 258.5 151 92.7
BcaB04g17413 Brassica carinata HOM05D000589 ORTHO05D001885 9.9e-47 190.7 109 90.8
BcaB02g11539 Brassica carinata HOM05D000589 ORTHO05D001885 2.7e-44 182.6 129 77.5
BcaB06g26956 Brassica carinata HOM05D000589 ORTHO05D001885 3.9e-43 178.7 123 80.5
BcaB01g01135 Brassica carinata HOM05D000589 ORTHO05D001885 4.0e-40 168.7 103 82.5
BcaB02g11088 Brassica carinata HOM05D000589 ORTHO05D091396 6.9e-32 141.4 94 84.0
BcaNung05686 Brassica carinata HOM05D000589 ORTHO05D090921 3.6e-28 129.0 96 75.0
BcaB01g01136 Brassica carinata HOM05D000353 ORTHO05D013242 4.6e-28 128.6 75 90.7
BcaB05g23079 Brassica carinata HOM05D000353 ORTHO05D013242 6.3e-25 118.2 75 82.7
BcaB03g16438 Brassica carinata HOM05D000353 ORTHO05D013242 3.1e-24 115.9 69 87.0
BcaNung05687 Brassica carinata HOM05D000353 ORTHO05D013242 2.6e-23 112.8 80 77.5
BcaB06g26938 Brassica carinata HOM05D000353 ORTHO05D013242 2.2e-22 109.8 79 75.9
BcaB07g33413 Brassica carinata HOM05D000589 ORTHO05D001885 1.9e-21 106.7 56 91.1
BcaB04g18091 Brassica carinata HOM05D000353 ORTHO05D013242 2.3e-19 99.8 65 76.9
BcaC08g42891 Brassica carinata HOM05D000044 ORTHO05D002654 4.4e-18 95.5 56 83.9
BcaB08g35927 Brassica carinata HOM05D025466 ORTHO05D013242 1.3e-17 94.0 59 81.4
BcaB01g01538 Brassica carinata HOM05D011453 ORTHO05D014511 1.7e-17 93.6 58 86.2
BcaC04g21586 Brassica carinata HOM05D000589 ORTHO05D001885 1.2e-15 87.4 54 77.8
BolC6t35247H Brassica oleracea HOM05D000589 ORTHO05D001885 1.2e-15 87.4 54 81.5
BcaC02g12351 Brassica carinata HOM05D000589 ORTHO05D001885 5.9e-15 85.1 57 75.4
BcaB01g02433 Brassica carinata HOM05D005426 ORTHO05D012988 1.0e-14 84.3 57 73.7
BcaB05g22907 Brassica carinata HOM05D000589 ORTHO05D001885 2.2e-14 83.2 54 77.8
BcaC05g25328 Brassica carinata HOM05D000589 ORTHO05D001885 2.9e-14 82.8 54 75.9
BcaC01g05797 Brassica carinata HOM05D000589 ORTHO05D001885 3.8e-14 82.4 54 75.9
BcaC05g28348 Brassica carinata HOM05D000589 ORTHO05D001885 6.5e-14 81.6 54 74.1
BcaC05g29003 Brassica carinata HOM05D000589 ORTHO05D001885 1.9e-13 80.1 55 72.7
BcaC05g29611 Brassica carinata HOM05D000589 ORTHO05D000401 1.9e-13 80.1 47 83.0
C08p03150 Brassica napus HOM05D000930 ORTHO05D000748 1.9e-13 80.1 57 73.7
BcaC03g16729 Brassica carinata HOM05D000589 ORTHO05D004260 2.5e-13 79.7 54 72.2
BcaC06g33723 Brassica carinata HOM05D000589 ORTHO05D001885 3.2e-13 79.3 54 77.8
BcaB05g24472 Brassica carinata HOM05D000589 ORTHO05D001885 4.2e-13 79.0 54 77.8
BcaB06g26826 Brassica carinata HOM05D000589 ORTHO05D013242 5.5e-13 78.6 46 89.1
BcaC02g08929 Brassica carinata HOM05D000589 ORTHO05D001885 2.1e-12 76.6 51 74.5
BcaC08g45067 Brassica carinata HOM05D000589 ORTHO05D001885 2.7e-12 76.3 65 64.6
BolC1t01662H Brassica oleracea HOM05D000589 ORTHO05D001885 2.7e-12 76.3 46 82.6
BcaB05g22699 Brassica carinata HOM05D000589 ORTHO05D001885 6.1e-12 75.1 54 72.2
BcaB08g36271 Brassica carinata HOM05D000589 ORTHO05D001885 1.4e-11 73.9 67 65.7
BcaB01g01573 Brassica carinata HOM05D000589 ORTHO05D001885 1.8e-11 73.6 57 70.2
BcaB02g07028 Brassica carinata HOM05D000589 ORTHO05D001885 1.8e-11 73.6 54 70.4
BcaB06g27778 Brassica carinata HOM05D000589 ORTHO05D001885 1.8e-11 73.6 54 68.5
BcaC04g19792 Brassica carinata HOM05D000589 ORTHO05D001885 5.2e-11 72.0 54 66.7
BcaC05g25870 Brassica carinata HOM05D000589 ORTHO05D001885 5.2e-11 72.0 54 66.7
A07p09370 Brassica napus HOM05D025466 ORTHO05D013242 5.2e-11 72.0 69 59.4
BraA07t28733Z Brassica rapa HOM05D025466 ORTHO05D013242 5.2e-11 72.0 69 59.4
BcaB02g07029 Brassica carinata HOM05D000589 ORTHO05D001885 6.7e-11 71.6 53 69.8
BcaB07g32905 Brassica carinata HOM05D000589 ORTHO05D001885 6.7e-11 71.6 54 66.7
BcaB06g28242 Brassica carinata HOM05D000589 ORTHO05D001885 8.8e-11 71.2 60 65.0
BolC4t25876H Brassica oleracea HOM05D000589 ORTHO05D001885 8.8e-11 71.2 73 54.8
BcaC07g38282 Brassica carinata HOM05D000589 ORTHO05D001885 1.1e-10 70.9 54 68.5
BraA01t03046Z Brassica rapa HOM05D000589 ORTHO05D001885 1.1e-10 70.9 55 65.5
BraA08t32605Z Brassica rapa HOM05D000589 ORTHO05D001885 1.1e-10 70.9 55 65.5
BcaC06g33454 Brassica carinata HOM05D000589 ORTHO05D001885 1.5e-10 70.5 55 67.3
BcaC01g03078 Brassica carinata HOM05D001498 ORTHO05D008559 2.0e-10 70.1 55 65.5
BcaC07g38195 Brassica carinata HOM05D000589 ORTHO05D001885 2.0e-10 70.1 54 64.8
BcaC05g25264 Brassica carinata HOM05D000589 ORTHO05D001885 2.6e-10 69.7 62 59.7
BolC8t47924H Brassica oleracea HOM05D000589 ORTHO05D000401 2.6e-10 69.7 48 72.9
BcaC02g08655 Brassica carinata HOM05D000589 ORTHO05D001885 3.3e-10 69.3 54 64.8
BcaNung04078 Brassica carinata HOM05D000589 ORTHO05D001885 3.3e-10 69.3 55 67.3
BolC5t32503H Brassica oleracea HOM05D000353 ORTHO05D042563 3.3e-10 69.3 68 51.5
BcaB01g01311 Brassica carinata HOM05D000589 ORTHO05D001885 4.4e-10 68.9 55 63.6
BraA07t28350Z Brassica rapa HOM05D000589 ORTHO05D001885 4.4e-10 68.9 55 63.6
BcaC02g08590 Brassica carinata HOM05D000589 ORTHO05D001885 5.7e-10 68.6 55 65.5
BcaC05g28209 Brassica carinata HOM05D000589 ORTHO05D001885 5.7e-10 68.6 55 67.3
BcaNung01371 Brassica carinata HOM05D000589 ORTHO05D039362 5.7e-10 68.6 81 51.9
BcaC06g34173 Brassica carinata HOM05D000589 ORTHO05D001885 7.4e-10 68.2 72 54.2
BraA08t32774Z Brassica rapa HOM05D001498 ORTHO05D001885 7.4e-10 68.2 55 63.6
BcaB03g15491 Brassica carinata HOM05D000589 ORTHO05D001885 9.7e-10 67.8 54 61.1
BcaC04g22605 Brassica carinata HOM05D000589 ORTHO05D001885 9.7e-10 67.8 107 44.9
BcaC05g25861 Brassica carinata HOM05D000589 ORTHO05D001885 9.7e-10 67.8 56 62.5
BcaC09g51508 Brassica carinata HOM05D000589 ORTHO05D001885 9.7e-10 67.8 56 62.5
C05p37620 Brassica napus HOM05D000353 ORTHO05D042563 9.7e-10 67.8 68 50.0
BcaC06g36449 Brassica carinata HOM05D001498 ORTHO05D008559 1.3e-09 67.4 55 63.6
BcaC06g36688 Brassica carinata HOM05D001498 ORTHO05D001885 1.3e-09 67.4 55 63.6
BolC6t36239H Brassica oleracea HOM05D000589 ORTHO05D001885 1.3e-09 67.4 55 63.6
BolC6t37491H Brassica oleracea HOM05D000589 ORTHO05D001885 1.3e-09 67.4 55 63.6
BolC6t38390H Brassica oleracea HOM05D000589 ORTHO05D000401 1.3e-09 67.4 48 66.7
BcaB02g09875 Brassica carinata HOM05D000589 ORTHO05D001885 1.7e-09 67.0 54 64.8
BcaC03g18153 Brassica carinata HOM05D000589 ORTHO05D001885 1.7e-09 67.0 51 64.7
BcaC09g48394 Brassica carinata HOM05D000589 ORTHO05D001885 1.7e-09 67.0 55 63.6
BraA03t14502Z Brassica rapa HOM05D000589 ORTHO05D001885 1.7e-09 67.0 55 61.8
BraA08t32950Z Brassica rapa HOM05D000589 ORTHO05D001885 1.7e-09 67.0 56 64.3
BolC3t18711H Brassica oleracea HOM05D000589 ORTHO05D040045 2.2e-09 66.6 55 63.6
BcaB07g32349 Brassica carinata HOM05D000589 ORTHO05D001885 2.8e-09 66.2 54 59.3
BcaC01g03921 Brassica carinata HOM05D000589 ORTHO05D040045 2.8e-09 66.2 55 63.6
BcaC08g44374 Brassica carinata HOM05D001498 ORTHO05D008559 2.8e-09 66.2 55 63.6
BcaC03g14470 Brassica carinata HOM05D000589 ORTHO05D001885 3.7e-09 65.9 48 68.8
BraA02t07620Z Brassica rapa HOM05D000589 ORTHO05D001885 3.7e-09 65.9 56 62.5
BcaB06g27274 Brassica carinata HOM05D000589 ORTHO05D001885 4.8e-09 65.5 56 62.5
BcaC03g15149 Brassica carinata HOM05D000589 ORTHO05D001885 4.8e-09 65.5 91 42.9
C09p21140 Brassica napus HOM05D000353 ORTHO05D013242 4.8e-09 65.5 88 48.9
BolC9t55015H Brassica oleracea HOM05D000353 ORTHO05D013242 4.8e-09 65.5 88 48.9
BolC8t49419H Brassica oleracea HOM05D000589 ORTHO05D001885 8.2e-09 64.7 55 61.8
BcaC02g11767 Brassica carinata HOM05D000589 ORTHO05D001885 1.1e-08 64.3 57 59.6
BolC9t54652H Brassica oleracea HOM05D000589 ORTHO05D001885 1.1e-08 64.3 55 61.8
BcaB01g00737 Brassica carinata HOM05D009963 ORTHO05D013780 1.4e-08 63.9 34 88.2
BcaC04g22355 Brassica carinata HOM05D000589 ORTHO05D001885 1.4e-08 63.9 54 63.0
BolC4t25125H Brassica oleracea HOM05D000589 ORTHO05D001885 1.4e-08 63.9 55 61.8
BolC6t38706H Brassica oleracea HOM05D000589 ORTHO05D001885 1.4e-08 63.9 55 61.8
BcaB05g21802 Brassica carinata HOM05D000589 ORTHO05D001885 1.8e-08 63.5 51 64.7
BcaB01g01446 Brassica carinata HOM05D000589 ORTHO05D001885 2.4e-08 63.2 54 61.1
BcaB01g02139 Brassica carinata HOM05D000589 ORTHO05D001885 2.4e-08 63.2 54 61.1
BcaB03g15329 Brassica carinata HOM05D000589 ORTHO05D001885 4.1e-08 62.4 54 61.1
BcaB06g26774 Brassica carinata HOM05D000353 ORTHO05D092330 4.1e-08 62.4 39 82.1
BcaC08g45585 Brassica carinata HOM05D000589 ORTHO05D001885 4.1e-08 62.4 45 66.7
BolC9t57315H Brassica oleracea HOM05D000589 ORTHO05D001885 4.1e-08 62.4 55 60.0
BcaC01g00334 Brassica carinata HOM05D000589 ORTHO05D001885 7.0e-08 61.6 54 59.3
BcaC08g45829 Brassica carinata HOM05D000589 ORTHO05D001885 7.0e-08 61.6 54 61.1
BcaC04g20928 Brassica carinata HOM05D000589 ORTHO05D001885 9.1e-08 61.2 54 64.8
BcaB08g34473 Brassica carinata HOM05D000589 ORTHO05D001885 1.2e-07 60.8 54 59.3
BcaB01g02011 Brassica carinata HOM05D000589 ORTHO05D001885 1.6e-07 60.5 56 57.1
BcaB04g20296 Brassica carinata HOM05D000589 ORTHO05D001885 1.6e-07 60.5 54 59.3
BcaC04g22612 Brassica carinata HOM05D000589 ORTHO05D001885 1.6e-07 60.5 54 59.3
BolC7t41941H Brassica oleracea HOM05D025466 ORTHO05D013242 1.6e-07 60.5 62 54.8
BcaB06g27723 Brassica carinata HOM05D000589 ORTHO05D001885 2.0e-07 60.1 61 62.3
BcaC05g28962 Brassica carinata HOM05D000589 ORTHO05D001885 2.0e-07 60.1 56 60.7
BolC4t25855H Brassica oleracea HOM05D000589 ORTHO05D001885 2.0e-07 60.1 56 60.7
C07p14430 Brassica napus HOM05D025466 ORTHO05D013242 2.6e-07 59.7 62 54.8
BcaB06g26227 Brassica carinata HOM05D000589 ORTHO05D001885 3.5e-07 59.3 54 59.3
BcaC02g08299 Brassica carinata HOM05D000589 ORTHO05D001885 3.5e-07 59.3 54 57.4
BcaB01g05554 Brassica carinata HOM05D000589 ORTHO05D001885 4.5e-07 58.9 50 62.0
BolC9t55020H Brassica oleracea HOM05D000589 ORTHO05D001885 4.5e-07 58.9 52 61.5
BcaC03g16344 Brassica carinata HOM05D000589 ORTHO05D001885 5.9e-07 58.5 54 57.4
BraA09t38531Z Brassica rapa HOM05D000589 ORTHO05D001885 1.3e-06 57.4 105 41.9
A09p34640 Brassica napus HOM05D000589 ORTHO05D001885 1.7e-06 57.0 54 61.1
BolC8t48273H Brassica oleracea HOM05D000589 ORTHO05D001885 1.7e-06 57.0 55 61.8
BcaB06g26120 Brassica carinata HOM05D000353 ORTHO05D013242 2.2e-06 56.6 50 66.0
BcaC04g22143 Brassica carinata HOM05D000589 ORTHO05D001885 3.8e-06 55.8 50 58.0
BolC7t42427H Brassica oleracea HOM05D000589 ORTHO05D001885 3.8e-06 55.8 54 57.4
BolC8t49278H Brassica oleracea HOM05D000589 ORTHO05D001885 3.8e-06 55.8 50 60.0
BcaB04g18092 Brassica carinata HOM05D000353 ORTHO05D013242 5.0e-06 55.5 37 67.6
BcaB06g25896 Brassica carinata HOM05D000589 ORTHO05D001885 6.5e-06 55.1 54 51.9
BcaC08g44546 Brassica carinata HOM05D000589 ORTHO05D001885 6.5e-06 55.1 111 37.8
BcaC03g15667 Brassica carinata HOM05D000589 ORTHO05D001885 8.5e-06 54.7 52 61.5
BcaC07g38292 Brassica carinata HOM05D000589 ORTHO05D001885 8.5e-06 54.7 54 53.7


User provided reference genes

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