Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaB02g11456 Brassica carinata HOM05D009652 ORTHO05D013022 1.2e-189 666.4 333 100.0
BraA02t07594Z Brassica rapa HOM05D009652 ORTHO05D013022 4.4e-72 275.8 305 49.2
BcaB01g01609 Brassica carinata HOM05D009652 ORTHO05D013022 3.1e-65 253.1 148 87.2
BolC8t47788H Brassica oleracea HOM05D009652 ORTHO05D013022 3.3e-51 206.5 286 44.4
BraA02t07742Z Brassica rapa HOM05D009652 ORTHO05D017512 3.3e-43 179.9 309 35.9
BraA08t32570Z Brassica rapa HOM05D013925 ORTHO05D017512 1.3e-36 157.9 299 37.1
BolC8t47580H Brassica oleracea HOM05D009652 ORTHO05D013022 1.1e-35 154.8 115 64.3
BolC1t03225H Brassica oleracea HOM05D009652 ORTHO05D013022 1.3e-34 151.4 98 74.5
BolC8t47327H Brassica oleracea HOM05D013925 ORTHO05D017512 9.0e-33 145.2 195 45.1
BolC4t25873H Brassica oleracea HOM05D009652 ORTHO05D013022 4.6e-29 132.9 203 40.9
BcaC03g16439 Brassica carinata HOM05D009652 ORTHO05D013022 4.8e-26 122.9 99 63.6
BolC7t40598H Brassica oleracea HOM05D013925 ORTHO05D017512 3.1e-25 120.2 141 48.2
BolC7t40599H Brassica oleracea HOM05D013925 ORTHO05D017512 5.3e-25 119.4 141 48.2
BolC7t42578H Brassica oleracea HOM05D009652 ORTHO05D000016 4.5e-24 116.3 80 62.5
BolC8t47443H Brassica oleracea HOM05D012819 ORTHO05D013527 9.9e-24 115.2 78 66.7
BolC9t56259H Brassica oleracea HOM05D009652 ORTHO05D013022 4.9e-23 112.8 75 74.7
BolC5t30821H Brassica oleracea HOM05D008153 ORTHO05D017528 1.1e-22 111.7 150 45.3
BcaB02g11490 Brassica carinata HOM05D009652 ORTHO05D013022 2.4e-22 110.5 139 46.8
BraA01t02628Z Brassica rapa HOM05D009652 ORTHO05D013022 2.1e-18 97.4 188 36.2
BcaC07g37525 Brassica carinata HOM05D009652 ORTHO05D013022 2.4e-17 94.0 72 63.9
BcaC08g42795 Brassica carinata HOM05D009652 ORTHO05D031938 1.5e-16 91.3 114 48.2
BolC9t56256H Brassica oleracea HOM05D016801 ORTHO05D019902 4.5e-16 89.7 312 29.2
BolC9t56251H Brassica oleracea HOM05D012819 ORTHO05D013527 5.8e-16 89.4 58 69.0
BcaC06g35614 Brassica carinata HOM05D012819 ORTHO05D000016 2.9e-15 87.0 65 56.9
BcaB04g18174 Brassica carinata HOM05D009564 ORTHO05D000016 6.5e-15 85.9 113 38.1
BolC1t02965H Brassica oleracea HOM05D009652 ORTHO05D013022 1.1e-14 85.1 59 64.4
BolC5t32316H Brassica oleracea HOM05D012819 ORTHO05D013527 2.5e-14 84.0 58 67.2
BolC3t18988H Brassica oleracea HOM05D009652 ORTHO05D013022 4.6e-13 79.7 97 43.3
BolC3t19380H Brassica oleracea HOM05D016801 ORTHO05D019902 1.8e-12 77.8 306 27.8
BolC3t18990H Brassica oleracea HOM05D008153 ORTHO05D013022 2.5e-11 73.9 75 53.3
BolC2t10514H Brassica oleracea HOM05D009652 ORTHO05D013022 5.7e-11 72.8 91 38.5
BolC1t03221H Brassica oleracea HOM05D016801 ORTHO05D019902 2.8e-10 70.5 140 32.9
AT2G06105 Arabidopsis thaliana HOM05D009652 ORTHO05D000016 1.4e-09 68.2 118 30.5
BolC9t56692H Brassica oleracea HOM05D013925 ORTHO05D017512 3.1e-09 67.0 204 29.9
BcaC09g51409 Brassica carinata HOM05D013925 ORTHO05D017512 1.2e-08 65.1 55 58.2
BcaC08g43899 Brassica carinata HOM05D013925 ORTHO05D017512 2.0e-08 64.3 78 46.2
BolC2t10243H Brassica oleracea HOM05D016801 ORTHO05D019902 3.4e-08 63.5 90 40.0
BolC8t47616H Brassica oleracea HOM05D009652 ORTHO05D013022 4.5e-08 63.2 82 47.6
Sp3g25090 Schrenkiella parvula HOM05D009564 ORTHO05D012207 4.5e-08 63.2 105 34.3
BcaC08g42797 Brassica carinata HOM05D009652 ORTHO05D031938 2.9e-07 60.5 53 60.4
BolC6t36271H Brassica oleracea HOM05D009652 ORTHO05D013022 2.9e-07 60.5 84 40.5
BolC7t41461H Brassica oleracea HOM05D009298 ORTHO05D011246 3.8e-07 60.1 51 52.9
THA.LOC104800053 Tarenaya hassleriana HOM05D000014 ORTHO05D000016 1.1e-06 58.5 131 29.0
arahy.Tifrunner.gnm1.ann1.M79Q51 Arachis hypogaea HOM05D000014 ORTHO05D000016 1.9e-06 57.8 79 35.4
THA.LOC104803421 Tarenaya hassleriana HOM05D000014 ORTHO05D000016 2.5e-06 57.4 125 27.2
AL7G44650 Arabidopsis lyrata HOM05D015060 ORTHO05D014029 3.2e-06 57.0 64 40.6
BcaC05g27576 Brassica carinata HOM05D009652 ORTHO05D013022 4.2e-06 56.6 59 54.2
BraA10t42979Z Brassica rapa HOM05D016801 ORTHO05D019902 4.2e-06 56.6 144 34.0
BolC8t47696H Brassica oleracea HOM05D012819 ORTHO05D013527 5.5e-06 56.2 34 67.6
THA.LOC104804950 Tarenaya hassleriana HOM05D000014 ORTHO05D000016 9.3e-06 55.5 124 25.8
THA.LOC104817117 Tarenaya hassleriana HOM05D000014 ORTHO05D000016 9.3e-06 55.5 125 25.6


User provided reference genes

Program Settings