Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaB02g11366 Brassica carinata HOM05D007984 ORTHO05D013027 7.9e-241 837.0 532 100.0
BcaB08g35337 Brassica carinata HOM05D003554 ORTHO05D005130 2.9e-166 589.3 429 75.3
BcaB04g18306 Brassica carinata HOM05D007984 ORTHO05D013027 3.3e-162 575.9 373 91.7
BcaB03g16118 Brassica carinata HOM05D003554 ORTHO05D005130 3.8e-134 482.6 424 66.5
BcaB01g02862 Brassica carinata HOM05D003554 ORTHO05D005130 5.5e-133 478.8 379 73.1
BcaB08g35153 Brassica carinata HOM05D007984 ORTHO05D013027 2.5e-117 426.8 377 70.8
BcaB05g23507 Brassica carinata HOM05D007984 ORTHO05D013027 3.6e-100 369.8 273 87.9
BcaB04g17902 Brassica carinata HOM05D003554 ORTHO05D005130 9.1e-96 355.1 282 69.1
BcaB03g16422 Brassica carinata HOM05D007984 ORTHO05D013027 1.5e-90 337.8 385 57.9
BcaB02g11428 Brassica carinata HOM05D007984 ORTHO05D013027 2.6e-90 337.0 296 79.1
BcaB08g35475 Brassica carinata HOM05D007984 ORTHO05D013027 2.7e-87 327.0 241 85.9
BcaB06g26264 Brassica carinata HOM05D007984 ORTHO05D013027 2.4e-80 303.9 305 68.2
C02p40540 Brassica napus HOM05D007984 ORTHO05D014515 3.6e-68 263.5 345 54.8
BcaB03g16136 Brassica carinata HOM05D007984 ORTHO05D013027 3.1e-67 260.4 277 57.8
BcaB07g32849 Brassica carinata HOM05D007984 ORTHO05D013027 2.6e-66 257.3 393 51.1
BcaB03g16586 Brassica carinata HOM05D007984 ORTHO05D093912 2.0e-63 247.7 223 66.8
BcaB03g15507 Brassica carinata HOM05D007984 ORTHO05D013027 2.2e-57 227.6 375 45.9
BcaB01g01526 Brassica carinata HOM05D007984 ORTHO05D013027 5.6e-53 213.0 361 46.0
BcaB02g11458 Brassica carinata HOM05D007984 ORTHO05D013027 1.6e-47 194.9 338 42.0
BcaB05g23871 Brassica carinata HOM05D007984 ORTHO05D013027 2.3e-46 191.0 291 48.1
BcaB03g16380 Brassica carinata HOM05D007984 ORTHO05D017581 4.3e-45 186.8 303 49.2
BcaC03g13667 Brassica carinata HOM05D007984 ORTHO05D039917 3.1e-43 180.6 351 46.4
BcaB08g34926 Brassica carinata HOM05D007984 ORTHO05D013027 1.7e-41 174.9 224 49.1
BcaB04g17649 Brassica carinata HOM05D007984 ORTHO05D013027 3.5e-39 167.2 96 89.6
Carub.0007s3074 Capsella rubella HOM05D003554 ORTHO05D005130 7.8e-39 166.0 230 43.9
A01p30450 Brassica napus HOM05D007984 ORTHO05D017581 1.3e-36 158.7 252 55.6
BraA08t32840Z Brassica rapa HOM05D007984 ORTHO05D014515 1.1e-35 155.6 259 51.7
A08p08210 Brassica napus HOM05D007984 ORTHO05D014515 3.1e-35 154.1 242 55.4
BcaC05g27840 Brassica carinata HOM05D007984 ORTHO05D014515 1.2e-34 152.1 346 44.8
Carub.0002s0995 Capsella rubella HOM05D003554 ORTHO05D005130 1.2e-34 152.1 247 41.3
A03p68030 Brassica napus HOM05D007984 ORTHO05D017581 2.6e-34 151.0 134 64.2
Carub.0007s0014 Capsella rubella HOM05D003554 ORTHO05D005130 2.6e-34 151.0 239 41.0
Carub.0004s0685 Capsella rubella HOM05D003554 ORTHO05D005130 4.5e-34 150.2 212 42.0
Carub.0278s0001 Capsella rubella HOM05D003554 ORTHO05D005130 7.6e-34 149.4 244 40.2
Carub.0001s3566 Capsella rubella HOM05D003554 ORTHO05D005130 9.9e-34 149.1 228 42.1
Carub.0006s2609 Capsella rubella HOM05D003554 ORTHO05D005130 3.8e-33 147.1 239 40.2
Carub.0002s0983 Capsella rubella HOM05D003554 ORTHO05D005130 8.4e-33 146.0 239 40.2
Carub.0002s0984 Capsella rubella HOM05D003554 ORTHO05D005130 3.2e-32 144.1 239 40.2
Carub.0093s0002 Capsella rubella HOM05D003554 ORTHO05D005130 6.0e-31 139.8 283 33.2
Aa31sc111G40 Aethionema arabicum HOM05D003554 ORTHO05D005130 3.0e-30 137.5 237 36.7
BcaB08g35293 Brassica carinata HOM05D003554 ORTHO05D005130 3.9e-30 137.1 291 35.4
Carub.0002s1014 Capsella rubella HOM05D003554 ORTHO05D005130 1.9e-29 134.8 150 47.3
Carub.0003s3367 Capsella rubella HOM05D003554 ORTHO05D005130 4.3e-29 133.7 220 40.9
Aa31LG10G9040 Aethionema arabicum HOM05D003554 ORTHO05D005130 5.6e-29 133.3 294 32.3
BcaB02g11402 Brassica carinata HOM05D007984 ORTHO05D013027 5.6e-29 133.3 273 43.2
BcaB03g16128 Brassica carinata HOM05D003554 ORTHO05D005130 2.8e-28 131.0 271 35.4
BcaB01g01280 Brassica carinata HOM05D003554 ORTHO05D005130 4.8e-28 130.2 272 34.2
BraA10t42946Z Brassica rapa HOM05D007984 ORTHO05D014515 5.3e-27 126.7 243 56.4
C02p33250 Brassica napus HOM05D003554 ORTHO05D005130 1.2e-26 125.6 209 37.3
C06p00090 Brassica napus HOM05D007984 ORTHO05D014515 2.0e-26 124.8 258 48.8
BcaB02g11541 Brassica carinata HOM05D003554 ORTHO05D005130 5.8e-26 123.2 270 33.3
BcaC03g16254 Brassica carinata HOM05D003554 ORTHO05D005130 6.4e-25 119.8 269 33.5
AL1G56530 Arabidopsis lyrata HOM05D003554 ORTHO05D005130 8.4e-25 119.4 220 33.2
AL1G56540 Arabidopsis lyrata HOM05D003554 ORTHO05D005130 8.4e-25 119.4 220 33.2
Carub.0002s1016 Capsella rubella HOM05D003554 ORTHO05D005130 4.2e-24 117.1 224 35.3
BcaB04g17410 Brassica carinata HOM05D003554 ORTHO05D005130 7.1e-24 116.3 277 34.7
BolC2t09968H Brassica oleracea HOM05D007984 ORTHO05D014515 2.1e-23 114.8 203 49.8
C07p01300 Brassica napus HOM05D007984 ORTHO05D013027 4.6e-23 113.6 298 40.3
Carub.0003s2756 Capsella rubella HOM05D003554 ORTHO05D005130 6.0e-23 113.2 238 34.9
BcaB06g26180 Brassica carinata HOM05D009532 ORTHO05D005130 1.0e-22 112.5 271 29.9
BcaB08g35391 Brassica carinata HOM05D003554 ORTHO05D005130 1.3e-22 112.1 226 33.2
BcaB07g33104 Brassica carinata HOM05D007984 ORTHO05D039989 2.3e-22 111.3 87 66.7
A06p22080 Brassica napus HOM05D007984 ORTHO05D014515 2.3e-22 111.3 183 51.9
BraA03t14882Z Brassica rapa HOM05D004128 ORTHO05D008395 2.3e-22 111.3 265 29.4
C05p37400 Brassica napus HOM05D003554 ORTHO05D005130 6.7e-22 109.8 208 37.0
BolC3t19531H Brassica oleracea HOM05D003554 ORTHO05D005130 6.7e-22 109.8 155 40.6
BolC9t56577H Brassica oleracea HOM05D004128 ORTHO05D008395 1.1e-21 109.0 169 39.1
C07p33860 Brassica napus HOM05D004128 ORTHO05D008395 7.4e-21 106.3 265 29.1
BraSC39t46212Z Brassica rapa HOM05D007984 ORTHO05D014515 7.4e-21 106.3 193 50.8
Aa31sc347G20 Aethionema arabicum HOM05D003554 ORTHO05D005130 9.6e-21 105.9 225 36.0
BolC8t47837H Brassica oleracea HOM05D004128 ORTHO05D008395 9.6e-21 105.9 271 29.9
BcaC08g42899 Brassica carinata HOM05D003554 ORTHO05D005130 1.3e-20 105.5 281 29.9
Aa31LG11G8070 Aethionema arabicum HOM05D003554 ORTHO05D005130 1.6e-20 105.1 204 32.4
Aa31LG6G9990 Aethionema arabicum HOM05D003554 ORTHO05D005130 3.7e-20 104.0 147 38.1
A01p27680 Brassica napus HOM05D007984 ORTHO05D017581 3.7e-20 104.0 79 68.4
Aa31sc129G60 Aethionema arabicum HOM05D003554 ORTHO05D005130 2.4e-19 101.3 276 27.9
A03p66520 Brassica napus HOM05D003037 ORTHO05D003659 4.0e-19 100.5 68 75.0
Aa31LG6G10050 Aethionema arabicum HOM05D003554 ORTHO05D005130 6.9e-19 99.8 249 30.9
BcaB04g17904 Brassica carinata HOM05D007984 ORTHO05D091678 6.9e-19 99.8 87 63.2
BcaB05g23503 Brassica carinata HOM05D003554 ORTHO05D008395 3.4e-18 97.4 142 39.4
A06p23780 Brassica napus HOM05D007984 ORTHO05D017581 4.5e-18 97.1 288 45.8
A06p26050 Brassica napus HOM05D007984 ORTHO05D017581 4.5e-18 97.1 288 45.8
BNapus_Darmor_BZH_scaffold_65p00100 Brassica napus HOM05D007984 ORTHO05D017581 4.5e-18 97.1 288 45.8
BcaB07g31822 Brassica carinata HOM05D003554 ORTHO05D032345 1.7e-17 95.1 306 26.8
BcaB02g10637 Brassica carinata HOM05D003554 ORTHO05D005130 2.2e-17 94.7 181 32.6
AL2G17330 Arabidopsis lyrata HOM05D003554 ORTHO05D008395 6.5e-17 93.2 201 29.4
A03p68560 Brassica napus HOM05D007984 ORTHO05D017581 8.4e-17 92.8 288 44.1
BcaNung01161 Brassica carinata HOM05D007203 ORTHO05D011558 1.4e-16 92.0 174 33.3
A10p06950 Brassica napus HOM05D007984 ORTHO05D101639 1.9e-16 91.7 182 56.0
BcaB06g25964 Brassica carinata HOM05D007984 ORTHO05D013027 5.5e-16 90.1 178 43.3
BolC3t13324H Brassica oleracea HOM05D003554 ORTHO05D008395 5.5e-16 90.1 163 30.7
C04p26230 Brassica napus HOM05D004128 ORTHO05D008395 9.3e-16 89.4 134 38.8
BolC4t24183H Brassica oleracea HOM05D004128 ORTHO05D008395 9.3e-16 89.4 134 38.8
A01p26910 Brassica napus HOM05D007984 ORTHO05D041558 1.2e-15 89.0 286 43.7
BraA01t02826Z Brassica rapa HOM05D007984 ORTHO05D041558 1.2e-15 89.0 286 43.7
C06p13740 Brassica napus HOM05D007984 ORTHO05D014515 2.7e-15 87.8 189 48.1
Aa31sc454G20 Aethionema arabicum HOM05D003554 ORTHO05D005130 4.6e-15 87.0 169 32.5
Aa31LG1G6440 Aethionema arabicum HOM05D003554 ORTHO05D005130 1.3e-14 85.5 231 29.0
A04p09600 Brassica napus HOM05D007984 ORTHO05D039989 1.3e-14 85.5 65 66.2
BcaB01g01146 Brassica carinata HOM05D003554 ORTHO05D005130 3.0e-14 84.3 292 27.7
A03p68500 Brassica napus HOM05D007984 ORTHO05D014515 6.7e-14 83.2 158 53.8
BraSC39t46204Z Brassica rapa HOM05D007984 ORTHO05D017581 1.9e-13 81.6 231 48.1
CARHR049310 Cardamine hirsuta HOM05D003554 ORTHO05D005130 1.9e-13 81.6 106 41.5
THA.LOC109116427 Tarenaya hassleriana HOM05D003554 ORTHO05D005130 2.1e-12 78.2 247 30.8
C02p14940 Brassica napus HOM05D008316 ORTHO05D021631 6.3e-12 76.6 91 40.7
C05p38370 Brassica napus HOM05D007984 ORTHO05D014515 1.4e-11 75.5 91 52.7
THA.LOC104811336 Tarenaya hassleriana HOM05D003554 ORTHO05D005130 1.8e-11 75.1 214 30.4
BolC5t32573H Brassica oleracea HOM05D007984 ORTHO05D014515 2.4e-11 74.7 186 48.4
THA.LOC109116563 Tarenaya hassleriana HOM05D003554 ORTHO05D005130 2.4e-11 74.7 211 28.9
Aa31sc471G30 Aethionema arabicum HOM05D003554 ORTHO05D005130 3.1e-11 74.3 146 30.1
C06p00220 Brassica napus HOM05D003554 ORTHO05D005130 3.1e-11 74.3 115 39.1
BolC5t32273H Brassica oleracea HOM05D003554 ORTHO05D005130 3.1e-11 74.3 115 39.1
THA.LOC104803192 Tarenaya hassleriana HOM05D003554 ORTHO05D005130 3.1e-11 74.3 245 28.6
THA.LOC104807874 Tarenaya hassleriana HOM05D003554 ORTHO05D005130 3.1e-11 74.3 214 30.4
C03p67190 Brassica napus HOM05D003554 ORTHO05D005130 4.1e-11 73.9 115 39.1
BcaC08g42812 Brassica carinata HOM05D008825 ORTHO05D013031 5.3e-11 73.6 224 32.1
Carub.0005s0863 Capsella rubella HOM05D003554 ORTHO05D005130 6.9e-11 73.2 91 38.5
Aa31LG6G9970 Aethionema arabicum HOM05D003554 ORTHO05D005130 9.0e-11 72.8 244 25.8
BNapus_Darmor_BZH_scaffold_167p00060 Brassica napus HOM05D003554 ORTHO05D005130 9.0e-11 72.8 105 33.3
BcaB06g26193 Brassica carinata HOM05D003554 ORTHO05D014926 1.2e-10 72.4 197 32.5
C09p52720 Brassica napus HOM05D004128 ORTHO05D008395 2.0e-10 71.6 138 31.9
BolC9t55613H Brassica oleracea HOM05D004128 ORTHO05D008395 2.0e-10 71.6 138 31.9
THA.LOC104799670 Tarenaya hassleriana HOM05D003554 ORTHO05D005130 2.0e-10 71.6 187 29.4
BcaB03g16057 Brassica carinata HOM05D007984 ORTHO05D093492 2.6e-10 71.2 100 48.0
BcaC03g16180 Brassica carinata HOM05D007984 ORTHO05D014515 2.6e-10 71.2 252 39.7
BcaC04g20860 Brassica carinata HOM05D007984 ORTHO05D032965 2.6e-10 71.2 85 52.9
BolC6t38472H Brassica oleracea HOM05D004128 ORTHO05D008395 4.5e-10 70.5 138 31.9
BraA07t28446Z Brassica rapa HOM05D003554 ORTHO05D005130 4.5e-10 70.5 115 35.7
THA.LOC104823081 Tarenaya hassleriana HOM05D003554 ORTHO05D005130 4.5e-10 70.5 215 28.4
BolC2t07285H Brassica oleracea HOM05D004128 ORTHO05D008395 5.9e-10 70.1 138 31.9
BraA07t30708Z Brassica rapa HOM05D004128 ORTHO05D008395 7.6e-10 69.7 138 31.9
BraA10t42724Z Brassica rapa HOM05D004128 ORTHO05D008395 7.6e-10 69.7 138 31.9
A07p06510 Brassica napus HOM05D003554 ORTHO05D005130 1.3e-09 68.9 115 35.7
C03p49780 Brassica napus HOM05D004128 ORTHO05D008395 1.3e-09 68.9 138 31.2
C04p23890 Brassica napus HOM05D004128 ORTHO05D008395 1.3e-09 68.9 138 31.9
C05p06190 Brassica napus HOM05D003554 ORTHO05D005130 1.3e-09 68.9 105 36.2
THA.LOC104821166 Tarenaya hassleriana HOM05D003554 ORTHO05D005130 1.3e-09 68.9 145 31.7
Aa31LG5G24000 Aethionema arabicum HOM05D003554 ORTHO05D005130 2.2e-09 68.2 80 45.0
C06p01800 Brassica napus HOM05D004128 ORTHO05D008395 2.2e-09 68.2 119 32.8
BolC8t50772H Brassica oleracea HOM05D004128 ORTHO05D008395 2.2e-09 68.2 238 26.5
A04p09640 Brassica napus HOM05D007984 ORTHO05D042340 8.5e-09 66.2 105 43.8
BraA04t16623Z Brassica rapa HOM05D007984 ORTHO05D042340 8.5e-09 66.2 105 43.8
Sp7g02635 Schrenkiella parvula HOM05D003554 ORTHO05D005130 1.4e-08 65.5 77 44.2
THA.LOC104809668 Tarenaya hassleriana HOM05D003554 ORTHO05D005130 1.4e-08 65.5 145 31.0
THA.LOC109116278 Tarenaya hassleriana HOM05D003554 ORTHO05D005130 1.4e-08 65.5 213 26.8
BcaC01g02197 Brassica carinata HOM05D003554 ORTHO05D014926 2.5e-08 64.7 126 38.1
BcaC08g45828 Brassica carinata HOM05D003554 ORTHO05D014926 4.2e-08 63.9 107 39.3
THA.LOC104798651 Tarenaya hassleriana HOM05D003554 ORTHO05D015748 4.2e-08 63.9 140 31.4
BcaC01g00316 Brassica carinata HOM05D003554 ORTHO05D014926 5.5e-08 63.5 107 40.2
C02p39560 Brassica napus HOM05D007984 ORTHO05D099310 5.5e-08 63.5 161 49.7
THA.LOC104825259 Tarenaya hassleriana HOM05D003554 ORTHO05D005130 5.5e-08 63.5 146 29.5
Aa31sc151G30 Aethionema arabicum HOM05D003554 ORTHO05D005130 7.2e-08 63.2 80 38.8
BcaC01g01745 Brassica carinata HOM05D003554 ORTHO05D014926 7.2e-08 63.2 122 36.1
Aa31sc318G10 Aethionema arabicum HOM05D028239 ORTHO05D005130 1.2e-07 62.4 98 35.7
Aa31sc538G10 Aethionema arabicum HOM05D003554 ORTHO05D008395 2.7e-07 61.2 155 29.0
BcaB06g28000 Brassica carinata HOM05D009532 ORTHO05D005130 2.7e-07 61.2 81 39.5
THA.LOC104807864 Tarenaya hassleriana HOM05D003554 ORTHO05D015748 3.6e-07 60.8 323 24.8
C08p06800 Brassica napus HOM05D003554 ORTHO05D005130 7.9e-07 59.7 105 31.4
Thhalv10000512m.g Eutrema salsugineum HOM05D003554 ORTHO05D005130 7.9e-07 59.7 88 33.0
BraA09t38864Z Brassica rapa HOM05D003554 ORTHO05D017243 8.7e-06 56.2 66 47.0
THA.LOC104800374 Tarenaya hassleriana HOM05D003554 ORTHO05D005130 8.7e-06 56.2 159 26.4
THA.LOC104807807 Tarenaya hassleriana HOM05D003554 ORTHO05D005130 8.7e-06 56.2 159 28.3
THA.LOC109116752 Tarenaya hassleriana HOM05D003554 ORTHO05D005130 8.7e-06 56.2 209 23.0


User provided reference genes

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