Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaB02g11354 Brassica carinata HOM05D000963 ORTHO05D011117 8.6e-44 179.9 87 100.0
BcaC04g20703 Brassica carinata HOM05D000963 ORTHO05D011117 7.3e-35 150.2 73 100.0
BcaC04g20780 Brassica carinata HOM05D000963 ORTHO05D011117 7.3e-35 150.2 73 100.0
BcaNung07084 Brassica carinata HOM05D000963 ORTHO05D011117 7.3e-35 150.2 73 100.0
C04p22530 Brassica napus HOM05D000963 ORTHO05D011117 1.4e-33 146.0 73 98.6
C09p24690 Brassica napus HOM05D000963 ORTHO05D011117 1.4e-33 146.0 73 98.6
C09p39370 Brassica napus HOM05D000963 ORTHO05D011117 1.4e-33 146.0 73 98.6
BolSC47t61068H Brassica oleracea HOM05D000963 ORTHO05D011117 1.4e-33 146.0 73 98.6
arahy.Tifrunner.gnm1.ann1.URY1CV Arachis hypogaea HOM05D000533 ORTHO05D011117 7.0e-30 133.7 70 92.9
arahy.Tifrunner.gnm1.ann1.UXAL1K Arachis hypogaea HOM05D000963 ORTHO05D011117 1.7e-28 129.0 70 90.0
Gohir.A02G134101 Gossypium hirsutum HOM05D000963 ORTHO05D004715 3.0e-28 128.3 66 95.5
Gohir.D03G074976 Gossypium hirsutum HOM05D000963 ORTHO05D004715 3.0e-28 128.3 66 95.5
TAR633G1337 Trochodendron aralioides HOM05D001070 ORTHO05D002096 5.1e-28 127.5 68 91.2
Sopen06g015040 Solanum pennellii HOM05D000963 ORTHO05D011117 6.6e-28 127.1 66 93.9
unitig_91.g26528 Utricularia gibba HOM05D000963 ORTHO05D005131 6.6e-28 127.1 66 93.9
MELO3C028157.2 Cucumis melo HOM05D000963 ORTHO05D011117 8.6e-28 126.7 65 95.4
MELO3C033790.2 Cucumis melo HOM05D000963 ORTHO05D011117 8.6e-28 126.7 65 95.4
Cpa.g.sc2719.1 Carica papaya HOM05D000963 ORTHO05D011117 1.5e-27 125.9 67 92.5
BcaNung01517 Brassica carinata HOM05D000963 ORTHO05D005131 1.9e-27 125.6 62 98.4
unitig_8.g4107 Utricularia gibba HOM05D000963 ORTHO05D011117 3.3e-27 124.8 66 92.4
arahy.Tifrunner.gnm1.ann1.MJQ8WH Arachis hypogaea HOM05D000963 ORTHO05D011117 5.6e-27 124.0 70 87.1
CSS0012622 Camellia sinensis var. sinensis HOM05D000963 ORTHO05D011117 7.3e-27 123.6 69 87.0
MELO3C027127.2 Cucumis melo HOM05D000963 ORTHO05D011117 7.3e-27 123.6 65 93.8
EL10As6g23662 Beta vulgaris HOM05D001325 ORTHO05D001540 8.1e-26 120.2 62 95.2
ECA074G0007 Erigeron canadensis HOM05D000963 ORTHO05D004715 8.1e-26 120.2 62 95.2
Oeu038562.1 Olea europaea HOM05D000963 ORTHO05D011117 1.8e-25 119.0 66 89.4
MELO3C028252.2 Cucumis melo HOM05D000963 ORTHO05D011117 6.4e-23 110.5 57 96.5
PGSC0003DMG400039021 Solanum tuberosum HOM05D000963 ORTHO05D010201 6.0e-21 104.0 52 96.2
DCAR_001525 Daucus carota HOM05D000963 ORTHO05D005131 1.0e-20 103.2 55 89.1
BraSC143t45648Z Brassica rapa HOM05D000963 ORTHO05D011117 5.6e-19 97.4 49 93.9
BcaC04g22599 Brassica carinata HOM05D000963 ORTHO05D011117 9.5e-19 96.7 56 82.1
arahy.Tifrunner.gnm1.ann1.H1VL0A Arachis hypogaea HOM05D000963 ORTHO05D011117 3.6e-18 94.7 69 69.6
BraSC58t46452Z Brassica rapa HOM05D000963 ORTHO05D011117 6.2e-18 94.0 50 92.0
Migut.D01399 Erythranthe guttata HOM05D000963 ORTHO05D011117 1.1e-17 93.2 50 90.0
Sopen01g027140 Solanum pennellii HOM05D000963 ORTHO05D011117 1.8e-17 92.4 50 90.0
VMungo1024G0004 Vigna mungo HOM05D000963 ORTHO05D011117 1.3e-15 86.3 73 60.3
MELO3C030559.2 Cucumis melo HOM05D000963 ORTHO05D011117 9.2e-14 80.1 41 87.8
EL10Ac6g15367 Beta vulgaris HOM05D000963 ORTHO05D011117 1.3e-12 76.3 71 63.4
Nitab4.5_0004841g0030 Nicotiana tabacum HOM05D000963 ORTHO05D005131 1.2e-08 63.2 44 65.9
TAR629G1823 Trochodendron aralioides HOM05D001041 ORTHO05D000846 7.6e-08 60.5 33 93.9
Cfa023002 Carpinus fangiana HOM05D000963 ORTHO05D011117 6.4e-07 57.4 29 89.7


User provided reference genes

Program Settings