Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaB02g11282 Brassica carinata HOM05D009010 ORTHO05D011482 4.1e-104 381.3 186 100.0
BcaC03g17777 Brassica carinata HOM05D009010 ORTHO05D011482 1.3e-70 270.0 178 74.7
BcaC08g43422 Brassica carinata HOM05D009010 ORTHO05D011482 4.5e-66 255.0 178 72.5
BcaC05g27110 Brassica carinata HOM05D009010 ORTHO05D011482 1.6e-63 246.5 161 75.8
BcaC04g20895 Brassica carinata HOM05D009010 ORTHO05D011482 4.2e-32 142.1 147 56.5
BolC7t42882H Brassica oleracea HOM05D009010 ORTHO05D011482 2.7e-31 139.4 165 42.4
BolC4t24401H Brassica oleracea HOM05D009010 ORTHO05D011482 6.8e-30 134.8 165 40.0
BraA01t02158Z Brassica rapa HOM05D009010 ORTHO05D011482 1.2e-29 134.0 160 40.6
BolC4t23395H Brassica oleracea HOM05D009010 ORTHO05D011482 3.7e-28 129.0 170 39.4
C05p15170 Brassica napus HOM05D009010 ORTHO05D011482 6.3e-28 128.3 160 39.4
C04p28560 Brassica napus HOM05D009010 ORTHO05D011482 1.8e-27 126.7 160 39.4
A03p39270 Brassica napus HOM05D009010 ORTHO05D020226 9.1e-27 124.4 160 38.1
BraA07t28517Z Brassica rapa HOM05D009010 ORTHO05D011482 4.5e-26 122.1 160 38.1
BolC4t27610H Brassica oleracea HOM05D009010 ORTHO05D011482 4.2e-24 115.5 167 38.9
Sp7g09190 Schrenkiella parvula HOM05D009010 ORTHO05D020226 3.6e-23 112.5 126 41.3
Sp1g26140 Schrenkiella parvula HOM05D009010 ORTHO05D011482 4.0e-22 109.0 116 41.4
C09p37860 Brassica napus HOM05D009010 ORTHO05D011482 1.7e-20 103.6 111 40.5
BolC9t56618H Brassica oleracea HOM05D009010 ORTHO05D011482 1.7e-20 103.6 111 40.5
BraA03t11416Z Brassica rapa HOM05D009010 ORTHO05D011482 2.8e-20 102.8 140 36.4
C09p41280 Brassica napus HOM05D008008 ORTHO05D011482 1.4e-19 100.5 211 32.2
BolC2t07253H Brassica oleracea HOM05D009010 ORTHO05D011482 9.2e-19 97.8 140 35.7
C07p55750 Brassica napus HOM05D009010 ORTHO05D011482 1.2e-18 97.4 140 35.7
Carub.0005s0344 Capsella rubella HOM05D009010 ORTHO05D011482 2.3e-17 93.2 108 42.6
C07p08370 Brassica napus HOM05D008008 ORTHO05D014134 9.5e-16 87.8 152 34.9
Aa31LG10G5600 Aethionema arabicum HOM05D009010 ORTHO05D011482 1.2e-15 87.4 104 42.3
A10p14530 Brassica napus HOM05D009010 ORTHO05D011482 4.4e-13 79.0 106 34.9
C02p29940 Brassica napus HOM05D009010 ORTHO05D011482 3.7e-12 75.9 115 33.9
SpUn0003_0020 Schrenkiella parvula HOM05D009010 ORTHO05D020226 4.1e-11 72.4 118 39.8
Sp4g05970 Schrenkiella parvula HOM05D009318 ORTHO05D008901 7.0e-11 71.6 84 38.1
BolC9t56387H Brassica oleracea HOM05D008389 ORTHO05D010630 1.2e-10 70.9 120 33.3
BolSC21t60290H Brassica oleracea HOM05D008389 ORTHO05D010630 1.6e-10 70.5 106 35.8
Sp6g12020 Schrenkiella parvula HOM05D009318 ORTHO05D011482 2.0e-10 70.1 104 32.7
C07p17520 Brassica napus HOM05D015473 ORTHO05D011560 2.7e-10 69.7 138 31.9
BolC7t42260H Brassica oleracea HOM05D015473 ORTHO05D011560 2.7e-10 69.7 138 31.9
BcaB08g36541 Brassica carinata HOM05D009010 ORTHO05D011482 4.6e-10 68.9 85 35.3
BolC9t55312H Brassica oleracea HOM05D009318 ORTHO05D014524 7.8e-10 68.2 104 31.7
C06p16630 Brassica napus HOM05D009318 ORTHO05D014524 1.0e-09 67.8 168 26.2
BolC6t36172H Brassica oleracea HOM05D008389 ORTHO05D010630 1.3e-09 67.4 131 36.6
Thhalv10003036m.g Eutrema salsugineum HOM05D000017 ORTHO05D000013 3.0e-09 66.2 129 31.0
Thhalv10003478m.g Eutrema salsugineum HOM05D000017 ORTHO05D014524 3.0e-09 66.2 98 30.6
BolC3t17570H Brassica oleracea HOM05D008389 ORTHO05D010630 5.0e-09 65.5 122 33.6
BraA04t16483Z Brassica rapa HOM05D008389 ORTHO05D010630 1.1e-08 64.3 154 30.5
BraA09t38570Z Brassica rapa HOM05D008389 ORTHO05D010630 1.1e-08 64.3 135 31.1
BolC2t12075H Brassica oleracea HOM05D008389 ORTHO05D010630 1.9e-08 63.5 109 33.0
C04p57460 Brassica napus HOM05D009136 ORTHO05D011560 2.5e-08 63.2 111 32.4
BraA01t02763Z Brassica rapa HOM05D009318 ORTHO05D014524 2.5e-08 63.2 99 31.3
Thhalv10015794m.g Eutrema salsugineum HOM05D000017 ORTHO05D000013 2.5e-08 63.2 94 33.0
Thhalv10023077m.g Eutrema salsugineum HOM05D000017 ORTHO05D014524 3.3e-08 62.8 183 26.8
Thhalv10017584m.g Eutrema salsugineum HOM05D000017 ORTHO05D000013 4.3e-08 62.4 181 27.1
Carub.0007s3160 Capsella rubella HOM05D010688 ORTHO05D010630 5.6e-08 62.0 113 29.2
SpUn0026_0050 Schrenkiella parvula HOM05D009010 ORTHO05D020226 5.6e-08 62.0 118 33.1
SpUn0046_0020 Schrenkiella parvula HOM05D009010 ORTHO05D020226 5.6e-08 62.0 118 33.1
BolC3t19876H Brassica oleracea HOM05D008389 ORTHO05D010630 9.5e-08 61.2 138 30.4
BcaC07g39403 Brassica carinata HOM05D009010 ORTHO05D011482 1.2e-07 60.8 66 40.9
BolC1t04008H Brassica oleracea HOM05D008389 ORTHO05D010630 1.2e-07 60.8 103 35.0
Aa31LG10G12070 Aethionema arabicum HOM05D009010 ORTHO05D011482 1.6e-07 60.5 119 31.9
BolC9t55740H Brassica oleracea HOM05D008389 ORTHO05D018586 1.6e-07 60.5 138 30.4
BolC7t41797H Brassica oleracea HOM05D008389 ORTHO05D010630 2.8e-07 59.7 95 34.7
BolC7t42495H Brassica oleracea HOM05D008389 ORTHO05D018586 3.6e-07 59.3 138 29.0
Aa31sc172G50 Aethionema arabicum HOM05D009010 ORTHO05D018248 4.7e-07 58.9 92 37.0
BcaC04g20446 Brassica carinata HOM05D008389 ORTHO05D010630 8.0e-07 58.2 106 32.1
C03p78200 Brassica napus HOM05D008389 ORTHO05D010630 8.0e-07 58.2 127 28.3
BcaB01g00392 Brassica carinata HOM05D010688 ORTHO05D010630 3.1e-06 56.2 145 27.6
BcaB01g01028 Brassica carinata HOM05D009318 ORTHO05D021617 4.0e-06 55.8 84 29.8
A03p61790 Brassica napus HOM05D009010 ORTHO05D011482 6.8e-06 55.1 65 35.4
BraA04t16647Z Brassica rapa HOM05D008008 ORTHO05D027984 6.8e-06 55.1 159 26.4
Aa31sc52G160 Aethionema arabicum HOM05D002189 ORTHO05D002233 8.9e-06 54.7 90 32.2
BcaC08g44289 Brassica carinata HOM05D010688 ORTHO05D010630 8.9e-06 54.7 98 31.6
BolC2t11222H Brassica oleracea HOM05D008389 ORTHO05D010630 8.9e-06 54.7 88 35.2


User provided reference genes

Program Settings