Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaB02g11279 Brassica carinata HOM05D001498 ORTHO05D095830 2.3e-51 205.3 106 100.0
BcaB02g11277 Brassica carinata HOM05D001498 ORTHO05D091891 4.0e-43 177.9 106 91.5
BcaB07g33220 Brassica carinata HOM05D001498 ORTHO05D096371 4.9e-33 144.4 101 82.2
BcaB03g16152 Brassica carinata HOM05D001498 ORTHO05D093112 8.3e-33 143.7 84 89.3
BcaB07g32913 Brassica carinata HOM05D001498 ORTHO05D091922 1.1e-32 143.3 84 88.1
BcaB05g23120 Brassica carinata HOM05D001498 ORTHO05D090647 4.3e-29 131.3 83 80.7
BcaB04g17776 Brassica carinata HOM05D001498 ORTHO05D092868 4.4e-18 94.7 83 61.4
BcaB07g32989 Brassica carinata HOM05D001498 ORTHO05D008559 5.8e-18 94.4 75 64.0
BcaB01g01484 Brassica carinata HOM05D001498 ORTHO05D091615 2.2e-17 92.4 89 58.4
BcaB07g33217 Brassica carinata HOM05D001498 ORTHO05D093085 2.2e-17 92.4 93 54.8
BcaB07g33084 Brassica carinata HOM05D001498 ORTHO05D092207 1.1e-16 90.1 88 56.8
BcaB06g26727 Brassica carinata HOM05D001498 ORTHO05D093134 4.1e-16 88.2 94 52.1
BcaB04g17703 Brassica carinata HOM05D001498 ORTHO05D021639 5.4e-16 87.8 85 60.0
BcaB01g01816 Brassica carinata HOM05D001498 ORTHO05D091844 1.2e-15 86.7 85 57.6
BcaB05g23244 Brassica carinata HOM05D001498 ORTHO05D095601 2.1e-15 85.9 94 54.3
C07p49110 Brassica napus HOM05D001498 ORTHO05D097837 6.0e-15 84.3 93 54.8
BcaB04g18314 Brassica carinata HOM05D001498 ORTHO05D095953 1.3e-14 83.2 85 51.8
BcaC04g19551 Brassica carinata HOM05D001498 ORTHO05D090991 1.3e-14 83.2 92 52.2
BcaC07g38657 Brassica carinata HOM05D001498 ORTHO05D011506 1.7e-14 82.8 84 54.8
C01p48970 Brassica napus HOM05D001498 ORTHO05D011506 1.7e-14 82.8 93 53.8
BolC1t03827H Brassica oleracea HOM05D001498 ORTHO05D011506 1.7e-14 82.8 93 53.8
BcaB04g17678 Brassica carinata HOM05D001498 ORTHO05D094760 2.3e-14 82.4 104 46.2
BcaC08g44056 Brassica carinata HOM05D001498 ORTHO05D091470 2.3e-14 82.4 72 61.1
C09p16580 Brassica napus HOM05D001498 ORTHO05D011506 2.3e-14 82.4 93 52.7
BcaB07g32352 Brassica carinata HOM05D001498 ORTHO05D021639 3.0e-14 82.0 106 50.0
BcaB06g27273 Brassica carinata HOM05D001498 ORTHO05D094467 3.9e-14 81.6 94 50.0
BcaC09g50109 Brassica carinata HOM05D001498 ORTHO05D093510 3.9e-14 81.6 69 60.9
BcaC02g11068 Brassica carinata HOM05D001498 ORTHO05D016694 6.6e-14 80.9 87 48.3
BcaC08g44373 Brassica carinata HOM05D001498 ORTHO05D011506 6.6e-14 80.9 93 51.6
C06p31050 Brassica napus HOM05D001498 ORTHO05D011506 6.6e-14 80.9 93 52.7
BcaB05g22943 Brassica carinata HOM05D001498 ORTHO05D096110 8.6e-14 80.5 98 45.9
BcaC05g27663 Brassica carinata HOM05D001498 ORTHO05D090842 8.6e-14 80.5 78 52.6
C03p66370 Brassica napus HOM05D001498 ORTHO05D011506 8.6e-14 80.5 93 52.7
C09p27470 Brassica napus HOM05D001498 ORTHO05D011506 8.6e-14 80.5 105 48.6
BcaC05g27519 Brassica carinata HOM05D001498 ORTHO05D011506 1.1e-13 80.1 93 52.7
BolC5t31266H Brassica oleracea HOM05D001498 ORTHO05D019959 1.1e-13 80.1 92 48.9
BolC2t11288H Brassica oleracea HOM05D001498 ORTHO05D011506 1.5e-13 79.7 105 47.6
BcaB03g15933 Brassica carinata HOM05D001498 ORTHO05D021639 1.9e-13 79.3 106 49.1
BcaB02g11227 Brassica carinata HOM05D001498 ORTHO05D093168 3.3e-13 78.6 44 88.6
BcaB05g23246 Brassica carinata HOM05D001498 ORTHO05D090900 3.3e-13 78.6 85 50.6
A08p07550 Brassica napus HOM05D001498 ORTHO05D011506 3.3e-13 78.6 102 46.1
BolC4t23616H Brassica oleracea HOM05D001498 ORTHO05D016694 3.3e-13 78.6 87 47.1
BcaB01g03187 Brassica carinata HOM05D001498 ORTHO05D090608 4.3e-13 78.2 104 45.2
BcaC02g09114 Brassica carinata HOM05D001498 ORTHO05D011506 4.3e-13 78.2 93 51.6
A08p09540 Brassica napus HOM05D001498 ORTHO05D011506 5.6e-13 77.8 84 53.6
BolC9t57107H Brassica oleracea HOM05D001498 ORTHO05D016694 5.6e-13 77.8 79 50.6
C01p38680 Brassica napus HOM05D001498 ORTHO05D011506 7.3e-13 77.4 88 53.4
C04p20860 Brassica napus HOM05D001498 ORTHO05D016694 7.3e-13 77.4 87 47.1
C04p21380 Brassica napus HOM05D001498 ORTHO05D013028 7.3e-13 77.4 88 53.4
BcaB05g23077 Brassica carinata HOM05D001498 ORTHO05D091436 1.2e-12 76.6 104 43.3
A03p54380 Brassica napus HOM05D001498 ORTHO05D011506 1.2e-12 76.6 87 50.6
BcaB07g33315 Brassica carinata HOM05D001498 ORTHO05D091495 1.6e-12 76.3 104 43.3
BcaC06g35524 Brassica carinata HOM05D001498 ORTHO05D016694 1.6e-12 76.3 87 44.8
A08p06060 Brassica napus HOM05D001498 ORTHO05D011506 1.6e-12 76.3 84 53.6
C09p42290 Brassica napus HOM05D001498 ORTHO05D016694 1.6e-12 76.3 79 49.4
BcaC05g25872 Brassica carinata HOM05D001498 ORTHO05D011506 2.1e-12 75.9 102 49.0
C09p17600 Brassica napus HOM05D001498 ORTHO05D011506 2.1e-12 75.9 87 52.9
BcaC02g11926 Brassica carinata HOM05D001498 ORTHO05D019959 2.8e-12 75.5 92 46.7
C03p56230 Brassica napus HOM05D001498 ORTHO05D001885 2.8e-12 75.5 82 53.7
C03p66000 Brassica napus HOM05D001498 ORTHO05D001885 2.8e-12 75.5 80 55.0
A01p28560 Brassica napus HOM05D001498 ORTHO05D021639 3.6e-12 75.1 63 61.9
BcaB01g01309 Brassica carinata HOM05D001498 ORTHO05D091216 4.7e-12 74.7 75 54.7
BcaC06g36329 Brassica carinata HOM05D001498 ORTHO05D096194 4.7e-12 74.7 87 44.8
C01p44920 Brassica napus HOM05D001498 ORTHO05D011506 4.7e-12 74.7 86 52.3
C01p30520 Brassica napus HOM05D001498 ORTHO05D001885 6.2e-12 74.3 87 50.6
C08p17880 Brassica napus HOM05D001498 ORTHO05D001885 8.1e-12 73.9 86 52.3
BolC8t49067H Brassica oleracea HOM05D001498 ORTHO05D011506 8.1e-12 73.9 77 53.2
BolC9t54653H Brassica oleracea HOM05D001498 ORTHO05D011506 8.1e-12 73.9 86 52.3
BcaB07g33754 Brassica carinata HOM05D001498 ORTHO05D092729 1.1e-11 73.6 68 52.9
BcaB08g35016 Brassica carinata HOM05D001498 ORTHO05D092631 1.4e-11 73.2 104 41.3
C02p52020 Brassica napus HOM05D001498 ORTHO05D011506 1.8e-11 72.8 99 46.5
BolC1t02817H Brassica oleracea HOM05D001498 ORTHO05D106172 1.8e-11 72.8 86 51.2
BcaB02g10765 Brassica carinata HOM05D001498 ORTHO05D095468 2.3e-11 72.4 78 47.4
BcaB08g35461 Brassica carinata HOM05D001498 ORTHO05D090491 2.3e-11 72.4 91 49.5
BcaB01g01185 Brassica carinata HOM05D001498 ORTHO05D019959 4.0e-11 71.6 105 40.0
BcaB06g25736 Brassica carinata HOM05D001498 ORTHO05D021639 4.0e-11 71.6 84 52.4
BcaB08g35076 Brassica carinata HOM05D001498 ORTHO05D021639 4.0e-11 71.6 97 48.5
BcaC09g48967 Brassica carinata HOM05D001498 ORTHO05D011506 4.0e-11 71.6 84 51.2
C01p30560 Brassica napus HOM05D001498 ORTHO05D011506 4.0e-11 71.6 84 52.4
BolC3t19484H Brassica oleracea HOM05D001498 ORTHO05D011506 4.0e-11 71.6 84 52.4
BraA03t15290Z Brassica rapa HOM05D001498 ORTHO05D011506 4.0e-11 71.6 98 45.9
BolC3t17911H Brassica oleracea HOM05D001498 ORTHO05D008559 5.2e-11 71.2 95 45.3
BcaB06g26483 Brassica carinata HOM05D001498 ORTHO05D095599 6.8e-11 70.9 91 46.2
C02p53500 Brassica napus HOM05D001498 ORTHO05D001885 6.8e-11 70.9 100 47.0
BcaB06g26755 Brassica carinata HOM05D001498 ORTHO05D092466 8.9e-11 70.5 84 52.4
BcaB07g33085 Brassica carinata HOM05D001498 ORTHO05D095625 8.9e-11 70.5 104 40.4
BcaC04g20364 Brassica carinata HOM05D001498 ORTHO05D011506 8.9e-11 70.5 84 51.2
C04p36710 Brassica napus HOM05D001498 ORTHO05D001885 8.9e-11 70.5 87 49.4
BcaB05g22880 Brassica carinata HOM05D001498 ORTHO05D019959 1.2e-10 70.1 84 45.2
BcaB06g25739 Brassica carinata HOM05D001498 ORTHO05D093323 1.2e-10 70.1 98 50.0
BcaB04g18432 Brassica carinata HOM05D001498 ORTHO05D090882 2.0e-10 69.3 84 51.2
BcaC04g20545 Brassica carinata HOM05D001498 ORTHO05D016694 2.0e-10 69.3 70 50.0
BolC8t47367H Brassica oleracea HOM05D001498 ORTHO05D011506 2.6e-10 68.9 89 46.1
BraA08t32774Z Brassica rapa HOM05D001498 ORTHO05D001885 3.4e-10 68.6 95 43.2
BcaB07g33213 Brassica carinata HOM05D001498 ORTHO05D090837 5.8e-10 67.8 75 46.7
BcaB01g01371 Brassica carinata HOM05D001498 ORTHO05D091381 2.2e-09 65.9 75 45.3
BcaC04g20544 Brassica carinata HOM05D001498 ORTHO05D016694 2.2e-09 65.9 78 48.7
BcaB03g16298 Brassica carinata HOM05D001498 ORTHO05D095831 3.8e-09 65.1 103 41.7
BcaC02g10287 Brassica carinata HOM05D001498 ORTHO05D093229 3.8e-09 65.1 88 47.7
C05p25290 Brassica napus HOM05D001498 ORTHO05D019959 8.4e-09 63.9 77 48.1
BcaB06g27205 Brassica carinata HOM05D001498 ORTHO05D091204 1.4e-08 63.2 78 41.0
BcaC05g26789 Brassica carinata HOM05D001498 ORTHO05D094205 1.4e-08 63.2 61 55.7
BcaB02g11218 Brassica carinata HOM05D001224 ORTHO05D010571 2.4e-08 62.4 87 41.4
C09p21170 Brassica napus HOM05D001498 ORTHO05D011506 3.2e-08 62.0 94 41.5
BolC9t55019H Brassica oleracea HOM05D001498 ORTHO05D011506 3.2e-08 62.0 94 41.5
BcaB05g24509 Brassica carinata HOM05D001379 ORTHO05D001277 5.4e-08 61.2 72 44.4
BcaC03g13777 Brassica carinata HOM05D001498 ORTHO05D091916 2.3e-06 55.8 89 41.6
BcaB06g26678 Brassica carinata HOM05D001498 ORTHO05D094527 3.0e-06 55.5 58 51.7
BcaB06g26473 Brassica carinata HOM05D001498 ORTHO05D091656 3.9e-06 55.1 77 49.4
BolC7t41038H Brassica oleracea HOM05D001498 ORTHO05D032253 3.9e-06 55.1 64 50.0
C07p06210 Brassica napus HOM05D001498 ORTHO05D032253 5.1e-06 54.7 64 50.0
BcaC01g03078 Brassica carinata HOM05D001498 ORTHO05D008559 6.6e-06 54.3 73 49.3


User provided reference genes

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