Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaB02g11227 Brassica carinata HOM05D001498 ORTHO05D093168 4.1e-37 157.9 103 100.0
BcaB07g33220 Brassica carinata HOM05D001498 ORTHO05D096371 3.6e-25 118.2 101 68.3
BcaB03g16152 Brassica carinata HOM05D001498 ORTHO05D093112 1.5e-18 96.3 101 58.4
BcaB07g32913 Brassica carinata HOM05D001498 ORTHO05D091922 2.2e-14 82.4 44 95.5
BcaB02g11279 Brassica carinata HOM05D001498 ORTHO05D095830 4.2e-13 78.2 44 88.6
BcaB05g23120 Brassica carinata HOM05D001498 ORTHO05D090647 1.0e-11 73.6 44 84.1
BcaB01g01816 Brassica carinata HOM05D001498 ORTHO05D091844 1.6e-09 66.2 43 79.1
BcaB05g23244 Brassica carinata HOM05D001498 ORTHO05D095601 4.8e-09 64.7 43 79.1
BcaB06g26727 Brassica carinata HOM05D001498 ORTHO05D093134 4.8e-09 64.7 44 77.3
BcaB07g33084 Brassica carinata HOM05D001498 ORTHO05D092207 4.8e-09 64.7 43 76.7
BcaB07g33217 Brassica carinata HOM05D001498 ORTHO05D093085 4.8e-09 64.7 43 76.7
BcaB01g03187 Brassica carinata HOM05D001498 ORTHO05D090608 1.4e-08 63.2 40 80.0
BcaB04g17678 Brassica carinata HOM05D001498 ORTHO05D094760 3.1e-08 62.0 40 77.5
BcaB05g23077 Brassica carinata HOM05D001498 ORTHO05D091436 3.1e-08 62.0 40 77.5
BcaB07g32989 Brassica carinata HOM05D001498 ORTHO05D008559 3.1e-08 62.0 44 70.5
BcaC05g26789 Brassica carinata HOM05D001498 ORTHO05D094205 4.0e-08 61.6 43 72.1
BcaB01g01484 Brassica carinata HOM05D001498 ORTHO05D091615 5.3e-08 61.2 44 70.5
BcaB07g33315 Brassica carinata HOM05D001498 ORTHO05D091495 6.9e-08 60.8 40 75.0
BcaB02g11277 Brassica carinata HOM05D001498 ORTHO05D091891 9.0e-08 60.5 44 77.3
BcaB05g22943 Brassica carinata HOM05D001498 ORTHO05D096110 9.0e-08 60.5 40 75.0
BcaB06g25736 Brassica carinata HOM05D001498 ORTHO05D021639 1.2e-07 60.1 40 77.5
BcaB06g26483 Brassica carinata HOM05D001498 ORTHO05D095599 1.2e-07 60.1 40 75.0
BcaB06g27273 Brassica carinata HOM05D001498 ORTHO05D094467 1.2e-07 60.1 43 72.1
BcaB07g32352 Brassica carinata HOM05D001498 ORTHO05D021639 1.2e-07 60.1 40 77.5
BcaB08g35076 Brassica carinata HOM05D001498 ORTHO05D021639 1.2e-07 60.1 40 77.5
A01p28560 Brassica napus HOM05D001498 ORTHO05D021639 1.2e-07 60.1 40 77.5
A08p06060 Brassica napus HOM05D001498 ORTHO05D011506 1.2e-07 60.1 40 77.5
A08p09540 Brassica napus HOM05D001498 ORTHO05D011506 1.2e-07 60.1 40 77.5
BcaB04g18314 Brassica carinata HOM05D001498 ORTHO05D095953 1.5e-07 59.7 40 75.0
BcaB05g23246 Brassica carinata HOM05D001498 ORTHO05D090900 2.0e-07 59.3 40 75.0
BcaB04g17703 Brassica carinata HOM05D001498 ORTHO05D021639 2.6e-07 58.9 40 77.5
BcaB06g25739 Brassica carinata HOM05D001498 ORTHO05D093323 2.6e-07 58.9 40 77.5
BcaB06g26473 Brassica carinata HOM05D001498 ORTHO05D091656 2.6e-07 58.9 40 77.5
BcaB06g26755 Brassica carinata HOM05D001498 ORTHO05D092466 2.6e-07 58.9 40 77.5
BcaB06g27027 Brassica carinata HOM05D001498 ORTHO05D092574 2.6e-07 58.9 37 78.4
BcaB08g35461 Brassica carinata HOM05D001498 ORTHO05D090491 2.6e-07 58.9 40 77.5
BraA03t15290Z Brassica rapa HOM05D001498 ORTHO05D011506 2.6e-07 58.9 40 75.0
BcaB01g01309 Brassica carinata HOM05D001498 ORTHO05D091216 3.4e-07 58.5 40 72.5
BcaB04g17776 Brassica carinata HOM05D001498 ORTHO05D092868 4.5e-07 58.2 44 68.2
BcaB07g33085 Brassica carinata HOM05D001498 ORTHO05D095625 4.5e-07 58.2 40 72.5
BcaC01g03078 Brassica carinata HOM05D001498 ORTHO05D008559 4.5e-07 58.2 40 77.5
C01p30520 Brassica napus HOM05D001498 ORTHO05D001885 4.5e-07 58.2 40 77.5
C01p30560 Brassica napus HOM05D001498 ORTHO05D011506 4.5e-07 58.2 40 77.5
C01p38680 Brassica napus HOM05D001498 ORTHO05D011506 4.5e-07 58.2 40 77.5
C01p48970 Brassica napus HOM05D001498 ORTHO05D011506 4.5e-07 58.2 40 77.5
C02p52020 Brassica napus HOM05D001498 ORTHO05D011506 4.5e-07 58.2 40 77.5
C03p56230 Brassica napus HOM05D001498 ORTHO05D001885 4.5e-07 58.2 40 77.5
C03p66000 Brassica napus HOM05D001498 ORTHO05D001885 4.5e-07 58.2 40 77.5
C04p21380 Brassica napus HOM05D001498 ORTHO05D013028 4.5e-07 58.2 40 77.5
C06p31050 Brassica napus HOM05D001498 ORTHO05D011506 4.5e-07 58.2 40 77.5
C07p49110 Brassica napus HOM05D001498 ORTHO05D097837 4.5e-07 58.2 40 77.5
C08p17880 Brassica napus HOM05D001498 ORTHO05D001885 4.5e-07 58.2 40 77.5
C09p17600 Brassica napus HOM05D001498 ORTHO05D011506 4.5e-07 58.2 40 77.5
BolC1t03827H Brassica oleracea HOM05D001498 ORTHO05D011506 4.5e-07 58.2 40 77.5
BolC2t11288H Brassica oleracea HOM05D001498 ORTHO05D011506 4.5e-07 58.2 40 77.5
BolC3t17911H Brassica oleracea HOM05D001498 ORTHO05D008559 4.5e-07 58.2 40 77.5
BolC9t54653H Brassica oleracea HOM05D001498 ORTHO05D011506 4.5e-07 58.2 40 77.5
BcaB03g16194 Brassica carinata HOM05D001498 ORTHO05D091006 5.8e-07 57.8 37 75.7
BcaB04g18432 Brassica carinata HOM05D001498 ORTHO05D090882 5.8e-07 57.8 40 75.0
BcaC04g19551 Brassica carinata HOM05D001498 ORTHO05D090991 5.8e-07 57.8 39 76.9
BcaC06g36230 Brassica carinata HOM05D001498 ORTHO05D032253 5.8e-07 57.8 46 63.0
BolC5t31266H Brassica oleracea HOM05D001498 ORTHO05D019959 5.8e-07 57.8 43 65.1
BcaB03g15933 Brassica carinata HOM05D001498 ORTHO05D021639 7.6e-07 57.4 40 75.0
BcaB06g26478 Brassica carinata HOM05D001498 ORTHO05D092859 7.6e-07 57.4 37 75.7
BcaC09g48967 Brassica carinata HOM05D001498 ORTHO05D011506 7.6e-07 57.4 40 75.0
A03p54380 Brassica napus HOM05D001498 ORTHO05D011506 7.6e-07 57.4 40 75.0
C09p16580 Brassica napus HOM05D001498 ORTHO05D011506 7.6e-07 57.4 40 75.0
BolC7t41038H Brassica oleracea HOM05D001498 ORTHO05D032253 7.6e-07 57.4 43 65.1
BcaC04g20364 Brassica carinata HOM05D001498 ORTHO05D011506 9.9e-07 57.0 40 75.0
BcaC07g38657 Brassica carinata HOM05D001498 ORTHO05D011506 9.9e-07 57.0 40 75.0
BcaC08g44056 Brassica carinata HOM05D001498 ORTHO05D091470 9.9e-07 57.0 76 47.4
C01p44920 Brassica napus HOM05D001498 ORTHO05D011506 9.9e-07 57.0 40 75.0
C07p06210 Brassica napus HOM05D001498 ORTHO05D032253 9.9e-07 57.0 43 65.1
C09p27470 Brassica napus HOM05D001498 ORTHO05D011506 9.9e-07 57.0 40 75.0
BolC8t49067H Brassica oleracea HOM05D001498 ORTHO05D011506 9.9e-07 57.0 40 75.0
BolC1t02817H Brassica oleracea HOM05D001498 ORTHO05D106172 1.3e-06 56.6 40 75.0
BolC3t19484H Brassica oleracea HOM05D001498 ORTHO05D011506 1.3e-06 56.6 40 75.0
C05p25290 Brassica napus HOM05D001498 ORTHO05D019959 1.7e-06 56.2 43 62.8
BcaC02g09776 Brassica carinata HOM05D001498 ORTHO05D016036 2.2e-06 55.8 37 78.4
BcaC05g27663 Brassica carinata HOM05D001498 ORTHO05D090842 2.2e-06 55.8 43 65.1
C03p66370 Brassica napus HOM05D001498 ORTHO05D011506 2.2e-06 55.8 40 75.0
BcaC08g44373 Brassica carinata HOM05D001498 ORTHO05D011506 2.9e-06 55.5 40 72.5
BcaB07g33754 Brassica carinata HOM05D001498 ORTHO05D092729 3.8e-06 55.1 36 75.0
BcaB02g10765 Brassica carinata HOM05D001498 ORTHO05D095468 4.9e-06 54.7 43 65.1
BcaB06g26678 Brassica carinata HOM05D001498 ORTHO05D094527 4.9e-06 54.7 43 67.4
BcaC09g50109 Brassica carinata HOM05D001498 ORTHO05D093510 4.9e-06 54.7 37 75.7
A08p07550 Brassica napus HOM05D001498 ORTHO05D011506 4.9e-06 54.7 40 72.5
C04p36710 Brassica napus HOM05D001498 ORTHO05D001885 4.9e-06 54.7 37 75.7
BraA08t32774Z Brassica rapa HOM05D001498 ORTHO05D001885 4.9e-06 54.7 40 72.5
BcaB08g35016 Brassica carinata HOM05D001498 ORTHO05D092631 6.4e-06 54.3 40 67.5
BcaC02g11926 Brassica carinata HOM05D001498 ORTHO05D019959 6.4e-06 54.3 43 58.1
C02p53500 Brassica napus HOM05D001498 ORTHO05D001885 6.4e-06 54.3 40 72.5
C04p09850 Brassica napus HOM05D001498 ORTHO05D101798 6.4e-06 54.3 43 58.1
BolC8t47367H Brassica oleracea HOM05D001498 ORTHO05D011506 6.4e-06 54.3 40 72.5
BcaB07g33213 Brassica carinata HOM05D001498 ORTHO05D090837 8.4e-06 53.9 43 60.5
BcaC02g09114 Brassica carinata HOM05D001498 ORTHO05D011506 8.4e-06 53.9 40 72.5
BcaC03g14315 Brassica carinata HOM05D001498 ORTHO05D008559 8.4e-06 53.9 81 42.0
BcaC06g35064 Brassica carinata HOM05D001498 ORTHO05D016694 8.4e-06 53.9 42 64.3


User provided reference genes

Program Settings