Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaB02g11180 Brassica carinata HOM05D000073 ORTHO05D015520 5.0e-31 137.1 68 100.0
A08p02720 Brassica napus HOM05D000073 ORTHO05D015520 3.2e-14 81.3 80 55.0
A05p19950 Brassica napus HOM05D000073 ORTHO05D015520 2.8e-10 68.2 35 82.9
C05p33430 Brassica napus HOM05D000073 ORTHO05D000033 2.8e-10 68.2 35 82.9
BolC5t32066H Brassica oleracea HOM05D000073 ORTHO05D000033 2.8e-10 68.2 35 82.9
BraA05t20900Z Brassica rapa HOM05D000073 ORTHO05D000033 2.8e-10 68.2 35 82.9
Carub.0001s4179 Capsella rubella HOM05D000073 ORTHO05D000033 3.7e-10 67.8 57 61.4
AT1G47600 Arabidopsis thaliana HOM05D000073 ORTHO05D000033 4.8e-10 67.4 35 82.9
AT1G51470 Arabidopsis thaliana HOM05D000073 ORTHO05D000033 4.8e-10 67.4 35 82.9
A08p02700 Brassica napus HOM05D000073 ORTHO05D015520 4.8e-10 67.4 35 77.1
A08p02710 Brassica napus HOM05D000073 ORTHO05D015520 4.8e-10 67.4 35 77.1
CARHR041640 Cardamine hirsuta HOM05D000073 ORTHO05D000033 4.8e-10 67.4 35 77.1
CARHR041650 Cardamine hirsuta HOM05D000073 ORTHO05D000033 4.8e-10 67.4 35 77.1
CARHR259760 Cardamine hirsuta HOM05D000073 ORTHO05D000033 4.8e-10 67.4 35 80.0
BolC5t32056H Brassica oleracea HOM05D000073 ORTHO05D000033 8.3e-10 66.6 35 80.0
C03p90100 Brassica napus HOM05D000073 ORTHO05D015520 1.1e-09 66.2 35 74.3
C03p90110 Brassica napus HOM05D000073 ORTHO05D015520 1.1e-09 66.2 35 74.3
C03p90120 Brassica napus HOM05D000073 ORTHO05D015520 1.1e-09 66.2 35 74.3
C03p90130 Brassica napus HOM05D000073 ORTHO05D015520 1.1e-09 66.2 35 74.3
C03p90140 Brassica napus HOM05D000073 ORTHO05D015520 1.1e-09 66.2 35 74.3
BolC3t21336H Brassica oleracea HOM05D000073 ORTHO05D000033 1.1e-09 66.2 35 74.3
AL1G59380 Arabidopsis lyrata HOM05D000073 ORTHO05D000033 1.4e-09 65.9 35 80.0
Aa31LG10G10380 Aethionema arabicum HOM05D000073 ORTHO05D000033 1.8e-09 65.5 35 77.1
Aa31LG10G10390 Aethionema arabicum HOM05D000073 ORTHO05D000033 1.8e-09 65.5 35 77.1
Carub.0001s4034 Capsella rubella HOM05D000073 ORTHO05D000033 1.8e-09 65.5 35 80.0
AL1G52250 Arabidopsis lyrata HOM05D000073 ORTHO05D000033 2.4e-09 65.1 35 77.1
AL1G59360 Arabidopsis lyrata HOM05D000073 ORTHO05D000033 2.4e-09 65.1 35 77.1
BcaB02g11249 Brassica carinata HOM05D000073 ORTHO05D000033 2.4e-09 65.1 35 80.0
A05p19550 Brassica napus HOM05D000073 ORTHO05D000033 2.4e-09 65.1 35 80.0
A05p19560 Brassica napus HOM05D000073 ORTHO05D000033 2.4e-09 65.1 35 80.0
C06p13090 Brassica napus HOM05D000073 ORTHO05D000033 2.4e-09 65.1 36 75.0
BraA05t20860Z Brassica rapa HOM05D000073 ORTHO05D000033 2.4e-09 65.1 35 80.0
Thhalv10011399m.g Eutrema salsugineum HOM05D000073 ORTHO05D000033 2.4e-09 65.1 36 77.8
Thhalv10000681m.g Eutrema salsugineum HOM05D000073 ORTHO05D000033 3.1e-09 64.7 33 84.8
Thhalv10011390m.g Eutrema salsugineum HOM05D000073 ORTHO05D000033 3.1e-09 64.7 33 84.8
C05p33300 Brassica napus HOM05D000073 ORTHO05D000033 4.1e-09 64.3 35 77.1
BolC3t21333H Brassica oleracea HOM05D000073 ORTHO05D000033 4.1e-09 64.3 35 71.4
Aa31LG7G10420 Aethionema arabicum HOM05D000073 ORTHO05D000033 5.4e-09 63.9 35 77.1
BcaB04g17194 Brassica carinata HOM05D000073 ORTHO05D000033 5.4e-09 63.9 35 71.4
BcaB04g17196 Brassica carinata HOM05D000073 ORTHO05D000033 5.4e-09 63.9 35 71.4
BcaB04g17197 Brassica carinata HOM05D000073 ORTHO05D000033 5.4e-09 63.9 35 71.4
BcaB04g17198 Brassica carinata HOM05D000073 ORTHO05D000033 5.4e-09 63.9 35 71.4
C06p13020 Brassica napus HOM05D000073 ORTHO05D000033 7.0e-09 63.5 35 77.1
BolC6t36455H Brassica oleracea HOM05D000073 ORTHO05D015520 7.0e-09 63.5 35 77.1
BolC6t36459H Brassica oleracea HOM05D000073 ORTHO05D000033 7.0e-09 63.5 35 77.1
BcaC06g31767 Brassica carinata HOM05D000073 ORTHO05D000033 9.1e-09 63.2 34 73.5
THA.LOC104806960 Tarenaya hassleriana HOM05D000073 ORTHO05D000033 9.1e-09 63.2 33 78.8
Thhalv10011400m.g Eutrema salsugineum HOM05D000073 ORTHO05D000033 1.6e-08 62.4 36 75.0
THA.LOC104806961 Tarenaya hassleriana HOM05D000073 ORTHO05D000033 1.6e-08 62.4 33 75.8
Carub.0007s1931 Capsella rubella HOM05D000073 ORTHO05D000033 4.5e-08 60.8 30 83.3
Aa31sc89G150 Aethionema arabicum HOM05D000073 ORTHO05D000033 5.9e-08 60.5 34 70.6
Thhalv10012352m.g Eutrema salsugineum HOM05D000073 ORTHO05D000033 5.9e-08 60.5 28 92.9
Aa31LG10G5080 Aethionema arabicum HOM05D000073 ORTHO05D000033 7.7e-08 60.1 33 72.7
Carub.0007s2904 Capsella rubella HOM05D000073 ORTHO05D000033 1.7e-07 58.9 30 80.0
Aa31LG7G11350 Aethionema arabicum HOM05D000073 ORTHO05D000033 2.3e-07 58.5 33 69.7
C06p13080 Brassica napus HOM05D000073 ORTHO05D000033 2.9e-07 58.2 35 74.3
BolC6t36463H Brassica oleracea HOM05D000073 ORTHO05D000033 5.0e-07 57.4 57 52.6
C06p13110 Brassica napus HOM05D000073 ORTHO05D000033 7.2e-06 53.5 58 55.2


User provided reference genes

Program Settings