Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaB02g11170 Brassica carinata HOM05D000054 ORTHO05D095933 5.9e-23 110.2 61 100.0
BcaB04g17067 Brassica carinata HOM05D003871 ORTHO05D004621 4.2e-21 104.0 61 95.1
BcaC05g25530 Brassica carinata HOM05D000054 ORTHO05D000286 4.8e-17 90.5 61 86.9
BolC5t30210H Brassica oleracea HOM05D000054 ORTHO05D000286 4.5e-15 84.0 62 82.3
A06p12650 Brassica napus HOM05D000054 ORTHO05D000286 3.8e-14 80.9 62 79.0
BraA06t24426Z Brassica rapa HOM05D000054 ORTHO05D000286 3.8e-14 80.9 62 79.0
C05p14950 Brassica napus HOM05D000054 ORTHO05D000286 6.5e-14 80.1 62 79.0
Sp1g14810 Schrenkiella parvula HOM05D000054 ORTHO05D000286 2.5e-13 78.2 62 82.3
BcaC07g38807 Brassica carinata HOM05D000054 ORTHO05D000286 1.8e-11 72.0 62 72.6
BcaB03g13038 Brassica carinata HOM05D000054 ORTHO05D000286 3.0e-11 71.2 61 72.1
Thhalv10007825m.g Eutrema salsugineum HOM05D000054 ORTHO05D000286 4.4e-10 67.4 62 71.0
BolC8t49375H Brassica oleracea HOM05D000054 ORTHO05D000286 5.7e-10 67.0 59 69.5
C08p44380 Brassica napus HOM05D000054 ORTHO05D000286 1.7e-09 65.5 61 67.2
BolC8t51980H Brassica oleracea HOM05D000054 ORTHO05D000286 1.7e-09 65.5 61 67.2
BraA08t35056Z Brassica rapa HOM05D000054 ORTHO05D000286 3.7e-09 64.3 56 66.1
A08p31320 Brassica napus HOM05D000912 ORTHO05D001232 4.8e-09 63.9 50 74.0
A09p60800 Brassica napus HOM05D000054 ORTHO05D000286 1.2e-07 59.3 59 66.1
BraA09t41453Z Brassica rapa HOM05D000054 ORTHO05D000286 1.2e-07 59.3 59 66.1
C08p17500 Brassica napus HOM05D000912 ORTHO05D001232 4.5e-07 57.4 60 61.7
AT1G16670 Arabidopsis thaliana HOM05D000054 ORTHO05D000286 7.7e-07 56.6 61 63.9
AL1G28830 Arabidopsis lyrata HOM05D000054 ORTHO05D000286 1.0e-06 56.2 61 62.3
A09p60790 Brassica napus HOM05D000054 ORTHO05D000286 8.5e-06 53.1 49 67.3
BraA09t41452Z Brassica rapa HOM05D000054 ORTHO05D000286 8.5e-06 53.1 49 67.3


User provided reference genes

Program Settings