Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaB02g11157 Brassica carinata HOM05D008073 ORTHO05D000309 1.4e-78 296.2 147 100.0
BcaB06g28129 Brassica carinata HOM05D008073 ORTHO05D000309 6.9e-62 240.7 139 84.9
BcaC06g35486 Brassica carinata HOM05D008073 ORTHO05D000309 2.8e-55 218.8 139 73.4
C07p15530 Brassica napus HOM05D008073 ORTHO05D000309 1.1e-54 216.9 139 73.4
A01p24520 Brassica napus HOM05D008073 ORTHO05D000309 6.5e-52 207.6 139 70.5
BcaB03g16062 Brassica carinata HOM05D008073 ORTHO05D000309 2.5e-51 205.7 116 86.2
BcaC04g20561 Brassica carinata HOM05D008073 ORTHO05D000309 3.2e-51 205.3 141 68.8
C09p42090 Brassica napus HOM05D008073 ORTHO05D000309 1.6e-50 203.0 141 68.1
BcaC06g36281 Brassica carinata HOM05D008073 ORTHO05D000309 4.7e-50 201.4 127 72.4
A04p08080 Brassica napus HOM05D008073 ORTHO05D000309 7.9e-50 200.7 132 70.5
BcaC03g17928 Brassica carinata HOM05D008073 ORTHO05D000309 1.8e-49 199.5 141 66.0
BraA04t16496Z Brassica rapa HOM05D008073 ORTHO05D000309 1.8e-49 199.5 129 71.3
BcaB02g10845 Brassica carinata HOM05D008073 ORTHO05D000309 3.0e-49 198.7 138 69.6
BcaB06g28160 Brassica carinata HOM05D008073 ORTHO05D000309 6.7e-49 197.6 139 68.3
C07p05860 Brassica napus HOM05D001957 ORTHO05D002015 6.7e-41 171.0 109 72.5
BcaB05g24067 Brassica carinata HOM05D008073 ORTHO05D031741 6.1e-34 147.9 140 55.7
BcaB01g01612 Brassica carinata HOM05D008073 ORTHO05D000309 1.5e-32 143.3 134 53.7
BcaNung00231 Brassica carinata HOM05D008073 ORTHO05D000309 2.8e-31 139.0 137 50.4
A02p37000 Brassica napus HOM05D008073 ORTHO05D000309 1.4e-30 136.7 132 53.8
BraA02t08687Z Brassica rapa HOM05D008073 ORTHO05D000309 1.4e-30 136.7 132 53.8
BcaC01g02160 Brassica carinata HOM05D008073 ORTHO05D000309 1.8e-30 136.3 143 51.7
C03p68050 Brassica napus HOM05D008073 ORTHO05D000309 1.8e-30 136.3 143 51.7
BcaB08g36370 Brassica carinata HOM05D008073 ORTHO05D000309 2.4e-30 136.0 134 50.7
BcaB01g01302 Brassica carinata HOM05D008073 ORTHO05D000309 7.7e-29 131.0 74 85.1
BcaC07g37763 Brassica carinata HOM05D008073 ORTHO05D000309 1.0e-28 130.6 137 48.9
BolC7t43639H Brassica oleracea HOM05D008073 ORTHO05D000309 2.3e-25 119.4 141 46.8
BolC8t48149H Brassica oleracea HOM05D008073 ORTHO05D000309 2.2e-23 112.8 90 61.1
C01p21890 Brassica napus HOM05D008073 ORTHO05D000309 1.3e-20 103.6 61 65.6
BolC1t02116H Brassica oleracea HOM05D008073 ORTHO05D000309 1.3e-20 103.6 61 65.6
BcaB01g00830 Brassica carinata HOM05D008073 ORTHO05D000309 5.5e-19 98.2 97 52.6
BcaB04g19293 Brassica carinata HOM05D008073 ORTHO05D000309 1.0e-17 94.0 97 51.5
A05p13640 Brassica napus HOM05D008073 ORTHO05D000309 5.2e-17 91.7 72 52.8
C09p42360 Brassica napus HOM05D008073 ORTHO05D000309 1.2e-16 90.5 73 54.8
BolC7t40990H Brassica oleracea HOM05D001957 ORTHO05D002015 1.2e-16 90.5 69 68.1
BolC9t57115H Brassica oleracea HOM05D008073 ORTHO05D000309 1.2e-16 90.5 73 54.8
BcaB04g18140 Brassica carinata HOM05D008073 ORTHO05D000309 2.6e-16 89.4 75 52.0
BcaC05g25280 Brassica carinata HOM05D008073 ORTHO05D000309 7.5e-16 87.8 76 52.6
A07p31530 Brassica napus HOM05D008073 ORTHO05D000309 1.3e-15 87.0 92 45.7
BcaB03g15638 Brassica carinata HOM05D008073 ORTHO05D000309 1.7e-15 86.7 150 37.3
A08p09520 Brassica napus HOM05D008073 ORTHO05D031741 1.7e-15 86.7 93 50.5
BolC3t19468H Brassica oleracea HOM05D008073 ORTHO05D000309 4.9e-15 85.1 96 49.0
BcaB06g26984 Brassica carinata HOM05D008073 ORTHO05D000309 1.8e-14 83.2 75 53.3
BcaC06g36745 Brassica carinata HOM05D008073 ORTHO05D031794 4.1e-14 82.0 117 39.3
BcaB05g25086 Brassica carinata HOM05D008073 ORTHO05D000309 7.0e-14 81.3 75 53.3
BcaNung00469 Brassica carinata HOM05D008073 ORTHO05D000309 7.0e-14 81.3 81 45.7
BcaC09g50115 Brassica carinata HOM05D008073 ORTHO05D000309 2.7e-13 79.3 127 33.9
BcaC03g14649 Brassica carinata HOM05D008073 ORTHO05D000309 5.9e-13 78.2 141 33.3
AT5G33393 Arabidopsis thaliana HOM05D008073 ORTHO05D081038 1.0e-12 77.4 82 47.6
BolC7t41880H Brassica oleracea HOM05D008073 ORTHO05D000309 1.0e-12 77.4 82 48.8
BcaC04g20065 Brassica carinata HOM05D008073 ORTHO05D000309 1.3e-12 77.0 148 31.8
BolC1t03302H Brassica oleracea HOM05D008073 ORTHO05D000309 2.9e-12 75.9 65 53.8
BcaC03g14058 Brassica carinata HOM05D008073 ORTHO05D000309 3.8e-12 75.5 55 58.2
BraA09t38926Z Brassica rapa HOM05D009173 ORTHO05D000309 6.6e-12 74.7 137 37.2
Sp5g12640 Schrenkiella parvula HOM05D009173 ORTHO05D000309 1.6e-10 70.1 149 33.6
AT1G67235 Arabidopsis thaliana HOM05D008073 ORTHO05D000309 2.1e-10 69.7 94 41.5
Sp5g10600 Schrenkiella parvula HOM05D009173 ORTHO05D000309 3.6e-10 68.9 150 32.7
BcaC06g36173 Brassica carinata HOM05D007774 ORTHO05D000309 5.2e-09 65.1 70 45.7
BcaC08g43835 Brassica carinata HOM05D007774 ORTHO05D000309 5.2e-09 65.1 97 38.1
BolC9t54166H Brassica oleracea HOM05D008073 ORTHO05D043214 5.2e-09 65.1 65 56.9
AL1G56990 Arabidopsis lyrata HOM05D008073 ORTHO05D000309 8.9e-09 64.3 97 40.2
AL5G24470 Arabidopsis lyrata HOM05D008073 ORTHO05D000309 1.5e-08 63.5 142 31.0
AL8G21820 Arabidopsis lyrata HOM05D007774 ORTHO05D000309 1.5e-08 63.5 112 32.1
AL6G38890 Arabidopsis lyrata HOM05D008073 ORTHO05D000309 2.0e-08 63.2 149 30.2
AT1G52603 Arabidopsis thaliana HOM05D008073 ORTHO05D000309 2.0e-08 63.2 63 38.1
AL4G18060 Arabidopsis lyrata HOM05D008073 ORTHO05D000309 2.6e-08 62.8 97 40.2
BcaC01g02366 Brassica carinata HOM05D009173 ORTHO05D000309 2.6e-08 62.8 147 30.6
BolC3t18879H Brassica oleracea HOM05D009173 ORTHO05D000309 2.6e-08 62.8 147 30.6
BcaC04g20956 Brassica carinata HOM05D008073 ORTHO05D000309 3.4e-08 62.4 71 46.5
C09p37560 Brassica napus HOM05D008073 ORTHO05D000309 3.4e-08 62.4 71 46.5
BolC9t56587H Brassica oleracea HOM05D008073 ORTHO05D000309 3.4e-08 62.4 71 46.5
BcaB03g15391 Brassica carinata HOM05D009173 ORTHO05D000309 4.4e-08 62.0 153 28.1
BolC2t09377H Brassica oleracea HOM05D007774 ORTHO05D000309 4.4e-08 62.0 101 34.7
BraA03t09394Z Brassica rapa HOM05D008073 ORTHO05D043214 5.8e-08 61.6 65 52.3
BcaB02g11463 Brassica carinata HOM05D001224 ORTHO05D000309 7.5e-08 61.2 70 41.4
BcaC01g02494 Brassica carinata HOM05D009173 ORTHO05D000309 9.8e-08 60.8 156 28.8
BcaB08g35933 Brassica carinata HOM05D007774 ORTHO05D000309 1.3e-07 60.5 78 43.6
BcaNung05585 Brassica carinata HOM05D007774 ORTHO05D000309 1.3e-07 60.5 78 43.6
A01p38280 Brassica napus HOM05D001038 ORTHO05D000395 1.3e-07 60.5 100 33.0
BolC4t24443H Brassica oleracea HOM05D007774 ORTHO05D000309 1.3e-07 60.5 92 35.9
BraA02t06821Z Brassica rapa HOM05D001038 ORTHO05D000395 1.3e-07 60.5 71 39.4
BraA09t41073Z Brassica rapa HOM05D007774 ORTHO05D000309 1.3e-07 60.5 116 32.8
BcaB06g27901 Brassica carinata HOM05D007774 ORTHO05D000309 2.2e-07 59.7 78 41.0
BcaB01g02010 Brassica carinata HOM05D007774 ORTHO05D000309 2.9e-07 59.3 96 39.6
BcaC02g10427 Brassica carinata HOM05D007774 ORTHO05D000309 2.9e-07 59.3 98 32.7
BcaC01g02929 Brassica carinata HOM05D007774 ORTHO05D000309 3.7e-07 58.9 68 44.1
BcaC06g34090 Brassica carinata HOM05D007774 ORTHO05D000309 3.7e-07 58.9 97 32.0
BcaB02g11205 Brassica carinata HOM05D007774 ORTHO05D000309 6.4e-07 58.2 70 42.9
BcaB05g24508 Brassica carinata HOM05D001224 ORTHO05D000309 6.4e-07 58.2 70 40.0
BcaB03g16083 Brassica carinata HOM05D007774 ORTHO05D000309 8.3e-07 57.8 95 38.9
BcaC05g26851 Brassica carinata HOM05D007774 ORTHO05D000309 8.3e-07 57.8 59 49.2
AL3G40990 Arabidopsis lyrata HOM05D008073 ORTHO05D000309 1.1e-06 57.4 132 28.0
AL6G49470 Arabidopsis lyrata HOM05D008073 ORTHO05D000309 1.1e-06 57.4 132 28.0
BcaB06g27506 Brassica carinata HOM05D007774 ORTHO05D000309 1.1e-06 57.4 70 44.3
BcaB07g33250 Brassica carinata HOM05D007774 ORTHO05D000309 1.1e-06 57.4 85 37.6
BcaNung03185 Brassica carinata HOM05D007774 ORTHO05D000309 1.1e-06 57.4 76 38.2
BcaC02g10455 Brassica carinata HOM05D007774 ORTHO05D000309 1.4e-06 57.0 101 32.7
BcaB01g02983 Brassica carinata HOM05D007774 ORTHO05D000309 1.9e-06 56.6 101 34.7
BcaB03g16006 Brassica carinata HOM05D007774 ORTHO05D000309 1.9e-06 56.6 80 33.8
BcaC08g43001 Brassica carinata HOM05D009173 ORTHO05D000309 1.9e-06 56.6 154 29.2
AL2G19320 Arabidopsis lyrata HOM05D008073 ORTHO05D000309 2.4e-06 56.2 68 41.2
BcaB01g02175 Brassica carinata HOM05D007774 ORTHO05D000309 2.4e-06 56.2 85 36.5
BcaB02g11517 Brassica carinata HOM05D007774 ORTHO05D000309 2.4e-06 56.2 70 41.4
BcaB06g26508 Brassica carinata HOM05D007774 ORTHO05D000309 2.4e-06 56.2 70 41.4
BcaB06g26683 Brassica carinata HOM05D007774 ORTHO05D000309 2.4e-06 56.2 70 41.4
BcaB06g26754 Brassica carinata HOM05D007774 ORTHO05D000309 2.4e-06 56.2 70 41.4
BcaB06g27138 Brassica carinata HOM05D007774 ORTHO05D000309 2.4e-06 56.2 70 41.4
BcaC04g20915 Brassica carinata HOM05D007774 ORTHO05D000309 2.4e-06 56.2 85 34.1
BcaB04g16980 Brassica carinata HOM05D007774 ORTHO05D000309 3.2e-06 55.8 115 30.4
Lj5P838T14 Lonicera japonica HOM05D008126 ORTHO05D000309 3.2e-06 55.8 99 28.3
BcaB06g27156 Brassica carinata HOM05D008073 ORTHO05D000309 4.1e-06 55.5 147 27.9
BcaC02g09596 Brassica carinata HOM05D007774 ORTHO05D000309 4.1e-06 55.5 85 29.4
BcaC02g10095 Brassica carinata HOM05D008073 ORTHO05D000309 4.1e-06 55.5 53 43.4
BcaC04g22268 Brassica carinata HOM05D007774 ORTHO05D000309 7.0e-06 54.7 85 32.9
Lj4E150G0 Lonicera japonica HOM05D008126 ORTHO05D000309 7.0e-06 54.7 131 26.0
Lj5P426T12 Lonicera japonica HOM05D008126 ORTHO05D000309 7.0e-06 54.7 131 26.0
Lj6P58T20 Lonicera japonica HOM05D008126 ORTHO05D000309 9.2e-06 54.3 99 28.3


User provided reference genes

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