Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaB02g11118 Brassica carinata HOM05D002743 ORTHO05D002895 3.2e-74 281.6 132 100.0
A05p20390 Brassica napus HOM05D002743 ORTHO05D002895 6.0e-57 224.2 135 78.5
BraA05t20946Z Brassica rapa HOM05D002743 ORTHO05D002895 2.3e-56 222.2 135 78.5
Sp1g36850 Schrenkiella parvula HOM05D002743 ORTHO05D002895 5.5e-42 174.5 135 63.7
SpUn0137_0030 Schrenkiella parvula HOM05D002743 ORTHO05D002895 5.5e-42 174.5 135 63.7
Thhalv10011517m.g Eutrema salsugineum HOM05D002743 ORTHO05D002895 1.5e-36 156.4 128 64.8
BcaB07g33444 Brassica carinata HOM05D002743 ORTHO05D002895 3.8e-35 151.8 135 57.0
Sp2g04630 Schrenkiella parvula HOM05D002743 ORTHO05D002895 8.5e-35 150.6 136 58.1
BcaB07g33449 Brassica carinata HOM05D002743 ORTHO05D002895 1.1e-34 150.2 137 54.7
Thhalv10023522m.g Eutrema salsugineum HOM05D002743 ORTHO05D002895 1.1e-34 150.2 135 54.1
BcaB07g33448 Brassica carinata HOM05D002743 ORTHO05D002895 9.3e-34 147.1 135 56.3
BcaC08g43172 Brassica carinata HOM05D002743 ORTHO05D002895 7.9e-33 144.1 130 52.3
BolC6t35601H Brassica oleracea HOM05D002743 ORTHO05D002895 7.9e-33 144.1 129 52.7
BcaC04g22203 Brassica carinata HOM05D002743 ORTHO05D002895 2.5e-31 139.0 138 52.2
BcaC08g43177 Brassica carinata HOM05D002743 ORTHO05D002895 3.3e-31 138.7 135 54.8
BolC6t35599H Brassica oleracea HOM05D002743 ORTHO05D002895 3.3e-31 138.7 135 54.8
C06p04770 Brassica napus HOM05D002743 ORTHO05D002895 7.4e-31 137.5 135 56.3
BolC9t55130H Brassica oleracea HOM05D002743 ORTHO05D002895 9.7e-31 137.1 138 51.4
BraA09t37413Z Brassica rapa HOM05D002743 ORTHO05D002895 9.7e-31 137.1 138 51.4
C09p22150 Brassica napus HOM05D002743 ORTHO05D002895 1.7e-30 136.3 138 51.4
C06p04690 Brassica napus HOM05D002743 ORTHO05D002895 2.8e-30 135.6 135 52.6
BcaC08g43169 Brassica carinata HOM05D002743 ORTHO05D002895 3.7e-30 135.2 135 51.9
A06p03440 Brassica napus HOM05D002743 ORTHO05D002895 8.2e-30 134.0 135 52.6
BraA06t23552Z Brassica rapa HOM05D002743 ORTHO05D002895 1.1e-29 133.7 135 51.1
BcaB07g33451 Brassica carinata HOM05D002743 ORTHO05D002895 5.3e-29 131.3 135 51.9
AL1G57560 Arabidopsis lyrata HOM05D002743 ORTHO05D002895 2.6e-28 129.0 131 53.4
C05p34150 Brassica napus HOM05D002743 ORTHO05D002895 2.9e-27 125.6 73 78.1
AT1G49990 Arabidopsis thaliana HOM05D002743 ORTHO05D002895 2.5e-26 122.5 131 51.1
A09p17800 Brassica napus HOM05D002743 ORTHO05D002895 1.6e-25 119.8 127 49.6
BcaB07g31193 Brassica carinata HOM05D002743 ORTHO05D002895 2.3e-24 115.9 139 48.9
AL5G29370 Arabidopsis lyrata HOM05D002743 ORTHO05D002895 6.7e-24 114.4 95 61.1
Carub.0151s0001 Capsella rubella HOM05D002743 ORTHO05D002895 6.7e-24 114.4 128 52.3
CARHR040090 Cardamine hirsuta HOM05D002743 ORTHO05D002895 7.7e-20 100.9 134 41.8
AL5G16370 Arabidopsis lyrata HOM05D002743 ORTHO05D002895 3.9e-16 88.6 134 41.0
BcaC08g43170 Brassica carinata HOM05D002743 ORTHO05D002895 1.8e-13 79.7 84 46.4
AT3G23970 Arabidopsis thaliana HOM05D002743 ORTHO05D002895 9.1e-13 77.4 129 37.2
CARHR033610 Cardamine hirsuta HOM05D002743 ORTHO05D002895 5.0e-11 71.6 132 34.8
AT3G23950 Arabidopsis thaliana HOM05D002743 ORTHO05D002895 6.5e-11 71.2 139 33.1
Sp3g21990 Schrenkiella parvula HOM05D002743 ORTHO05D002895 6.5e-11 71.2 134 33.6
BraA07t28599Z Brassica rapa HOM05D002743 ORTHO05D002895 5.5e-10 68.2 138 33.3
A07p08150 Brassica napus HOM05D002743 ORTHO05D002895 7.2e-10 67.8 138 33.3
BcaC06g35666 Brassica carinata HOM05D002743 ORTHO05D002895 1.6e-09 66.6 138 33.3
C07p12300 Brassica napus HOM05D002743 ORTHO05D002895 1.6e-09 66.6 138 33.3
CARHR100280 Cardamine hirsuta HOM05D002743 ORTHO05D002895 1.6e-09 66.6 132 33.3
AL3G39540 Arabidopsis lyrata HOM05D002743 ORTHO05D002895 2.1e-09 66.2 137 32.1
AL6G47130 Arabidopsis lyrata HOM05D002743 ORTHO05D002895 2.7e-09 65.9 140 32.1
CARHR229890 Cardamine hirsuta HOM05D002743 ORTHO05D002895 2.7e-09 65.9 134 35.1
BolC7t41698H Brassica oleracea HOM05D002743 ORTHO05D002895 1.4e-08 63.5 138 32.6
AL3G39550 Arabidopsis lyrata HOM05D002743 ORTHO05D002895 1.8e-08 63.2 137 29.9
C07p02110 Brassica napus HOM05D002743 ORTHO05D002895 2.3e-08 62.8 129 32.6
AT3G28223 Arabidopsis thaliana HOM05D002743 ORTHO05D002895 3.0e-08 62.4 135 31.9
BcaC06g36618 Brassica carinata HOM05D002743 ORTHO05D002895 3.0e-08 62.4 129 31.8
BcaC06g36619 Brassica carinata HOM05D002743 ORTHO05D002895 3.0e-08 62.4 129 31.8
BolC7t40616H Brassica oleracea HOM05D002743 ORTHO05D002895 3.0e-08 62.4 129 31.8
AL3G39570 Arabidopsis lyrata HOM05D002743 ORTHO05D002895 6.7e-08 61.2 138 29.0
Carub.0003s2455 Capsella rubella HOM05D002743 ORTHO05D002895 6.7e-08 61.2 137 31.4
Carub.0003s2456 Capsella rubella HOM05D002743 ORTHO05D002895 6.7e-08 61.2 137 27.7
AL6G48160 Arabidopsis lyrata HOM05D002743 ORTHO05D002895 8.8e-08 60.8 137 26.3
BcaC03g17512 Brassica carinata HOM05D002743 ORTHO05D002895 8.8e-08 60.8 112 32.1
BolC2t11536H Brassica oleracea HOM05D002743 ORTHO05D002895 8.8e-08 60.8 112 32.1
THA.LOC104805970 Tarenaya hassleriana HOM05D002743 ORTHO05D002895 8.8e-08 60.8 139 31.7
AL1G67480 Arabidopsis lyrata HOM05D002743 ORTHO05D002895 1.2e-07 60.5 145 33.8
AT3G28330 Arabidopsis thaliana HOM05D002743 ORTHO05D002895 1.2e-07 60.5 128 32.0
BraA10t44063Z Brassica rapa HOM05D002743 ORTHO05D002895 1.2e-07 60.5 135 31.1
CARHR288580 Cardamine hirsuta HOM05D002743 ORTHO05D002895 1.2e-07 60.5 128 32.8
Thhalv10029227m.g Eutrema salsugineum HOM05D002743 ORTHO05D002895 1.2e-07 60.5 86 40.7
AL5G17810 Arabidopsis lyrata HOM05D002743 ORTHO05D002895 2.0e-07 59.7 107 29.9
AT3G26010 Arabidopsis thaliana HOM05D002743 ORTHO05D002895 2.0e-07 59.7 126 31.0
BraA10t43989Z Brassica rapa HOM05D002743 ORTHO05D002895 2.0e-07 59.7 96 30.2
Carub.0007s1889 Capsella rubella HOM05D002743 ORTHO05D002895 2.0e-07 59.7 135 31.9
BraA01t02518Z Brassica rapa HOM05D002743 ORTHO05D002895 3.3e-07 58.9 135 28.9
Carub.0007s1819 Capsella rubella HOM05D002743 ORTHO05D002895 4.4e-07 58.5 135 26.7
Aa31sc58G40 Aethionema arabicum HOM05D002743 ORTHO05D002895 5.7e-07 58.2 135 31.9
BcaB08g36564 Brassica carinata HOM05D002743 ORTHO05D002895 5.7e-07 58.2 138 30.4
BcaC05g27455 Brassica carinata HOM05D002743 ORTHO05D002895 7.5e-07 57.8 73 41.1
Carub.0005s0673 Capsella rubella HOM05D002743 ORTHO05D002895 7.5e-07 57.8 87 37.9
BolC9t58494H Brassica oleracea HOM05D002743 ORTHO05D002895 9.7e-07 57.4 136 25.7
A10p19880 Brassica napus HOM05D002743 ORTHO05D002895 1.3e-06 57.0 136 30.9
Aa31LG9G5850 Aethionema arabicum HOM05D002743 ORTHO05D002895 1.7e-06 56.6 141 28.4
Carub.0006s2838 Capsella rubella HOM05D002743 ORTHO05D002895 1.7e-06 56.6 141 27.7
THA.LOC104823978 Tarenaya hassleriana HOM05D002743 ORTHO05D002895 1.7e-06 56.6 123 29.3
BcaB08g37317 Brassica carinata HOM05D002743 ORTHO05D002895 2.2e-06 56.2 139 29.5
C09p56250 Brassica napus HOM05D002743 ORTHO05D002895 2.2e-06 56.2 136 25.0
A01p25990 Brassica napus HOM05D002743 ORTHO05D002895 3.7e-06 55.5 137 29.2
CARHR158010 Cardamine hirsuta HOM05D002743 ORTHO05D002895 3.7e-06 55.5 106 31.1
BcaC04g19490 Brassica carinata HOM05D002743 ORTHO05D002895 4.8e-06 55.1 138 27.5
BcaC09g51280 Brassica carinata HOM05D002743 ORTHO05D002895 4.8e-06 55.1 133 33.8
C01p14880 Brassica napus HOM05D002743 ORTHO05D002895 4.8e-06 55.1 133 33.8
C09p55180 Brassica napus HOM05D002743 ORTHO05D002895 4.8e-06 55.1 138 27.5
Thhalv10024137m.g Eutrema salsugineum HOM05D002743 ORTHO05D002895 4.8e-06 55.1 148 27.0
A10p19100 Brassica napus HOM05D002743 ORTHO05D002895 6.3e-06 54.7 95 29.5
C09p56220 Brassica napus HOM05D002609 ORTHO05D002820 6.3e-06 54.7 136 25.7
BolC1t01435H Brassica oleracea HOM05D002743 ORTHO05D002895 6.3e-06 54.7 133 33.8
BolC9t58379H Brassica oleracea HOM05D002743 ORTHO05D002895 6.3e-06 54.7 95 29.5
BraA08t33514Z Brassica rapa HOM05D002743 ORTHO05D002895 6.3e-06 54.7 127 31.5
Carub.0006s3136 Capsella rubella HOM05D002743 ORTHO05D002895 6.3e-06 54.7 57 43.9


User provided reference genes

Program Settings