Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaB02g11082 Brassica carinata HOM05D002210 ORTHO05D002304 2.8e-71 271.9 145 100.0
Thhalv10022328m.g Eutrema salsugineum HOM05D002210 ORTHO05D002304 2.5e-19 99.4 66 81.8
BcaB04g18294 Brassica carinata HOM05D002210 ORTHO05D002304 4.6e-18 95.1 62 85.5
AL3G10380 Arabidopsis lyrata HOM05D002210 ORTHO05D002304 4.1e-14 82.0 56 80.4
Carub.0003s0031 Capsella rubella HOM05D002210 ORTHO05D002304 4.1e-14 82.0 56 80.4
C03p39420 Brassica napus HOM05D002210 ORTHO05D002304 7.7e-13 77.8 52 80.8
BolC3t16210H Brassica oleracea HOM05D002210 ORTHO05D002304 7.7e-13 77.8 52 80.8
BraA03t12406Z Brassica rapa HOM05D002210 ORTHO05D002304 7.7e-13 77.8 52 80.8
A03p32360 Brassica napus HOM05D002210 ORTHO05D002304 2.9e-12 75.9 52 78.8
CARHR075170 Cardamine hirsuta HOM05D002210 ORTHO05D002304 2.9e-12 75.9 51 84.3
Atru.chr6.2494 Acer truncatum HOM05D002210 ORTHO05D002304 5.1e-09 65.1 60 60.0
Nitab4.5_0001898g0010 Nicotiana tabacum HOM05D002210 ORTHO05D002304 1.5e-08 63.5 60 55.0
THA.LOC104822402 Tarenaya hassleriana HOM05D002210 ORTHO05D002304 3.3e-08 62.4 50 66.0
VMungo1383G2007 Vigna mungo HOM05D002210 ORTHO05D002304 7.4e-08 61.2 62 51.6
Ca_25276_v3 Cicer arietinum L. HOM05D002210 ORTHO05D002424 9.7e-08 60.8 61 54.1
Aa31LG5G10880 Aethionema arabicum HOM05D002210 ORTHO05D002304 2.2e-07 59.7 61 57.4
Ah.14g083380 Amaranthus hybridus HOM05D002210 ORTHO05D002304 8.2e-07 57.8 101 39.6
CSS0023172 Camellia sinensis var. sinensis HOM05D002210 ORTHO05D002304 8.2e-07 57.8 61 52.5
Sabra08G0136700 Salix brachista HOM05D002210 ORTHO05D002304 1.8e-06 56.6 62 50.0
MD17G1017100 Malus domestica HOM05D002210 ORTHO05D002304 2.4e-06 56.2 52 57.7
Haze_14821 Corylus avellana HOM05D002210 ORTHO05D002304 9.1e-06 54.3 48 60.4


User provided reference genes

Program Settings