Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaB02g11056 Brassica carinata HOM05D002776 ORTHO05D000395 2.0e-217 758.8 382 100.0
BcaB06g27271 Brassica carinata HOM05D002776 ORTHO05D000395 6.6e-173 610.9 422 77.3
BcaB07g32915 Brassica carinata HOM05D002776 ORTHO05D003044 4.9e-144 515.0 433 68.1
BcaB07g33215 Brassica carinata HOM05D002776 ORTHO05D003044 1.1e-122 444.1 414 63.5
BcaB03g16160 Brassica carinata HOM05D002776 ORTHO05D003044 9.1e-98 361.3 399 58.1
BcaB05g23122 Brassica carinata HOM05D002776 ORTHO05D094231 1.1e-50 204.9 177 66.1
BcaC09g49626 Brassica carinata HOM05D002776 ORTHO05D023838 9.0e-45 185.3 352 40.1
BcaB03g16151 Brassica carinata HOM05D002776 ORTHO05D090966 3.2e-42 176.8 159 64.8
BcaB02g11276 Brassica carinata HOM05D002776 ORTHO05D092224 3.5e-41 173.3 94 92.6
BcaB05g23224 Brassica carinata HOM05D002776 ORTHO05D096291 6.0e-41 172.6 95 94.7
BcaB01g03194 Brassica carinata HOM05D002776 ORTHO05D093104 3.4e-36 156.8 129 66.7
BraA01t03052Z Brassica rapa HOM05D002776 ORTHO05D000395 4.6e-25 119.8 321 32.1
BcaC08g43736 Brassica carinata HOM05D002776 ORTHO05D000395 1.1e-23 115.2 138 47.8
C09p19460 Brassica napus HOM05D002776 ORTHO05D003044 1.9e-23 114.4 271 34.7
BraA07t28346Z Brassica rapa HOM05D002776 ORTHO05D000395 4.3e-23 113.2 338 30.8
C03p65970 Brassica napus HOM05D002776 ORTHO05D000395 1.6e-22 111.3 214 39.3
C09p28510 Brassica napus HOM05D002776 ORTHO05D000395 1.6e-22 111.3 272 33.1
BolC3t18858H Brassica oleracea HOM05D002776 ORTHO05D000395 2.8e-22 110.5 214 38.8
C06p18050 Brassica napus HOM05D002776 ORTHO05D000395 8.2e-22 109.0 155 43.2
C07p49090 Brassica napus HOM05D002776 ORTHO05D003044 8.2e-22 109.0 217 37.3
C04p41830 Brassica napus HOM05D002776 ORTHO05D000395 1.8e-21 107.8 217 38.7
C06p23340 Brassica napus HOM05D002776 ORTHO05D000395 1.8e-21 107.8 150 44.0
A10p06820 Brassica napus HOM05D002776 ORTHO05D003044 2.4e-21 107.5 341 29.6
C08p17870 Brassica napus HOM05D002776 ORTHO05D000395 2.4e-21 107.5 155 42.6
A03p54430 Brassica napus HOM05D002776 ORTHO05D000395 3.1e-21 107.1 150 44.7
BraA03t15291Z Brassica rapa HOM05D002776 ORTHO05D000395 3.1e-21 107.1 222 38.3
A01p28520 Brassica napus HOM05D002776 ORTHO05D000395 9.0e-21 105.5 150 43.3
A10p06580 Brassica napus HOM05D002776 ORTHO05D000395 9.0e-21 105.5 150 44.0
C01p30580 Brassica napus HOM05D002776 ORTHO05D003044 2.0e-20 104.4 218 38.5
BcaC07g39108 Brassica carinata HOM05D002776 ORTHO05D000395 2.6e-20 104.0 222 37.8
C08p08860 Brassica napus HOM05D002776 ORTHO05D000395 2.6e-20 104.0 150 43.3
BolC6t36736H Brassica oleracea HOM05D002776 ORTHO05D011320 3.4e-20 103.6 222 37.4
A01p20490 Brassica napus HOM05D002776 ORTHO05D000395 5.9e-20 102.8 150 43.3
A09p29650 Brassica napus HOM05D002776 ORTHO05D000395 5.9e-20 102.8 219 37.4
BraA01t01977Z Brassica rapa HOM05D002776 ORTHO05D000395 5.9e-20 102.8 150 43.3
C02p52040 Brassica napus HOM05D002776 ORTHO05D000395 1.3e-19 101.7 225 36.0
BraA09t38530Z Brassica rapa HOM05D002776 ORTHO05D000395 1.3e-19 101.7 219 37.4
BolC6t36243H Brassica oleracea HOM05D002776 ORTHO05D000395 1.7e-19 101.3 149 45.6
BcaB02g11313 Brassica carinata HOM05D002776 ORTHO05D000395 2.2e-19 100.9 142 42.3
C03p75850 Brassica napus HOM05D002776 ORTHO05D000395 5.0e-19 99.8 220 37.3
BcaB03g16296 Brassica carinata HOM05D002776 ORTHO05D000395 6.5e-19 99.4 156 45.5
A08p07580 Brassica napus HOM05D002776 ORTHO05D000395 1.9e-18 97.8 76 67.1
BcaC04g19553 Brassica carinata HOM05D002776 ORTHO05D000395 3.2e-18 97.1 92 56.5
BcaC07g37409 Brassica carinata HOM05D002776 ORTHO05D000395 5.5e-18 96.3 76 65.8
C04p36690 Brassica napus HOM05D002776 ORTHO05D000395 5.5e-18 96.3 97 55.7
BcaB06g26484 Brassica carinata HOM05D002776 ORTHO05D000395 1.2e-17 95.1 225 35.6
C03p56200 Brassica napus HOM05D002776 ORTHO05D000395 2.1e-17 94.4 76 64.5
BcaB01g02585 Brassica carinata HOM05D001224 ORTHO05D000395 4.3e-15 86.7 203 36.0
BcaB03g16495 Brassica carinata HOM05D002776 ORTHO05D000395 7.4e-15 85.9 62 69.4
BolC3t19386H Brassica oleracea HOM05D002776 ORTHO05D023860 2.4e-13 80.9 133 39.8
BolC7t41043H Brassica oleracea HOM05D000675 ORTHO05D000395 4.1e-13 80.1 122 38.5
BraA06t25784Z Brassica rapa HOM05D001224 ORTHO05D012331 5.3e-13 79.7 160 34.4
Thhalv10029248m.g Eutrema salsugineum HOM05D000675 ORTHO05D000395 5.3e-13 79.7 101 44.6
BcaC08g44371 Brassica carinata HOM05D002776 ORTHO05D003044 9.0e-13 79.0 181 35.9
Thhalv10012055m.g Eutrema salsugineum HOM05D000675 ORTHO05D000395 1.2e-12 78.6 74 51.4
AL1G45700 Arabidopsis lyrata HOM05D000675 ORTHO05D000395 1.5e-12 78.2 79 48.1
CARHR286300 Cardamine hirsuta HOM05D000675 ORTHO05D000395 1.5e-12 78.2 85 48.2
Thhalv10002344m.g Eutrema salsugineum HOM05D000675 ORTHO05D000395 2.6e-12 77.4 84 45.2
Thhalv10002958m.g Eutrema salsugineum HOM05D000675 ORTHO05D000395 2.6e-12 77.4 81 49.4
Thhalv10012269m.g Eutrema salsugineum HOM05D000675 ORTHO05D000395 2.6e-12 77.4 81 49.4
Thhalv10015767m.g Eutrema salsugineum HOM05D000675 ORTHO05D000395 2.6e-12 77.4 81 49.4
Thhalv10012169m.g Eutrema salsugineum HOM05D000675 ORTHO05D000395 3.4e-12 77.0 73 52.1
BcaB01g01307 Brassica carinata HOM05D002776 ORTHO05D003044 4.5e-12 76.6 176 38.1
BolC9t55016H Brassica oleracea HOM05D002776 ORTHO05D000395 4.5e-12 76.6 63 65.1
Thhalv10016067m.g Eutrema salsugineum HOM05D000675 ORTHO05D000395 4.5e-12 76.6 73 50.7
Thhalv10017554m.g Eutrema salsugineum HOM05D000675 ORTHO05D000395 5.9e-12 76.3 64 57.8
BcaC09g48604 Brassica carinata HOM05D001224 ORTHO05D018692 7.7e-12 75.9 186 32.8
Thhalv10000427m.g Eutrema salsugineum HOM05D000675 ORTHO05D000395 7.7e-12 75.9 64 56.2
Thhalv10000600m.g Eutrema salsugineum HOM05D000675 ORTHO05D000395 7.7e-12 75.9 64 56.2
Thhalv10003323m.g Eutrema salsugineum HOM05D000675 ORTHO05D000395 7.7e-12 75.9 73 50.7
Thhalv10005454m.g Eutrema salsugineum HOM05D000675 ORTHO05D000395 7.7e-12 75.9 73 50.7
Thhalv10010988m.g Eutrema salsugineum HOM05D000675 ORTHO05D000395 7.7e-12 75.9 73 50.7
Thhalv10019815m.g Eutrema salsugineum HOM05D000675 ORTHO05D000395 7.7e-12 75.9 64 56.2
Thhalv10024011m.g Eutrema salsugineum HOM05D000675 ORTHO05D000395 7.7e-12 75.9 73 50.7
Thhalv10026892m.g Eutrema salsugineum HOM05D000675 ORTHO05D000395 7.7e-12 75.9 64 56.2
Thhalv10027124m.g Eutrema salsugineum HOM05D000675 ORTHO05D000395 7.7e-12 75.9 73 50.7
Thhalv10029459m.g Eutrema salsugineum HOM05D000675 ORTHO05D000395 7.7e-12 75.9 64 56.2
C07p05350 Brassica napus HOM05D001224 ORTHO05D012331 1.0e-11 75.5 174 33.9
BolC4t23819H Brassica oleracea HOM05D002776 ORTHO05D000395 1.3e-11 75.1 188 32.4
BcaC02g12294 Brassica carinata HOM05D001224 ORTHO05D014478 1.7e-11 74.7 92 43.5
BraA01t01571Z Brassica rapa HOM05D000675 ORTHO05D000395 1.7e-11 74.7 68 52.9
CARHR148220 Cardamine hirsuta HOM05D000675 ORTHO05D000395 1.7e-11 74.7 67 56.7
Thhalv10000523m.g Eutrema salsugineum HOM05D000675 ORTHO05D000395 1.7e-11 74.7 81 46.9
Thhalv10023196m.g Eutrema salsugineum HOM05D000675 ORTHO05D000395 1.7e-11 74.7 73 49.3
C07p06250 Brassica napus HOM05D000675 ORTHO05D000395 2.2e-11 74.3 193 32.6
Thhalv10023185m.g Eutrema salsugineum HOM05D000675 ORTHO05D000395 2.2e-11 74.3 125 40.8
Thhalv10012150m.g Eutrema salsugineum HOM05D000675 ORTHO05D000395 2.9e-11 73.9 64 54.7
Thhalv10023833m.g Eutrema salsugineum HOM05D000675 ORTHO05D000395 2.9e-11 73.9 84 45.2
BcaC05g27783 Brassica carinata HOM05D001224 ORTHO05D000395 3.8e-11 73.6 131 39.7
BolC6t35536H Brassica oleracea HOM05D000675 ORTHO05D000395 3.8e-11 73.6 172 32.6
BolC7t40936H Brassica oleracea HOM05D002776 ORTHO05D012331 3.8e-11 73.6 174 33.9
Thhalv10001852m.g Eutrema salsugineum HOM05D000675 ORTHO05D000395 3.8e-11 73.6 64 54.7
Thhalv10010966m.g Eutrema salsugineum HOM05D000675 ORTHO05D000395 3.8e-11 73.6 73 49.3
Thhalv10015690m.g Eutrema salsugineum HOM05D000675 ORTHO05D000395 5.0e-11 73.2 110 40.9
Thhalv10029179m.g Eutrema salsugineum HOM05D000675 ORTHO05D000395 5.0e-11 73.2 64 54.7
Thhalv10002246m.g Eutrema salsugineum HOM05D000675 ORTHO05D000395 6.5e-11 72.8 54 61.1
Thhalv10015567m.g Eutrema salsugineum HOM05D000675 ORTHO05D000395 6.5e-11 72.8 72 48.6
Thhalv10027299m.g Eutrema salsugineum HOM05D000675 ORTHO05D000395 6.5e-11 72.8 81 46.9
BcaC08g44195 Brassica carinata HOM05D001224 ORTHO05D014478 8.5e-11 72.4 131 39.7
Thhalv10001262m.g Eutrema salsugineum HOM05D000675 ORTHO05D000395 8.5e-11 72.4 73 49.3
Thhalv10002954m.g Eutrema salsugineum HOM05D000675 ORTHO05D000395 8.5e-11 72.4 73 47.9
Thhalv10015721m.g Eutrema salsugineum HOM05D000675 ORTHO05D000395 8.5e-11 72.4 73 49.3
BcaC06g35526 Brassica carinata HOM05D002776 ORTHO05D012331 1.1e-10 72.0 194 33.5
BraSC37t46113Z Brassica rapa HOM05D000675 ORTHO05D000395 1.1e-10 72.0 137 34.3
BraA01t02479Z Brassica rapa HOM05D000675 ORTHO05D000395 1.4e-10 71.6 137 35.8
BraA06t25345Z Brassica rapa HOM05D000675 ORTHO05D000395 1.4e-10 71.6 68 51.5
Thhalv10000594m.g Eutrema salsugineum HOM05D000675 ORTHO05D000395 1.4e-10 71.6 64 54.7
Thhalv10000708m.g Eutrema salsugineum HOM05D000675 ORTHO05D000395 1.4e-10 71.6 85 47.1
BolC6t35441H Brassica oleracea HOM05D001224 ORTHO05D003542 1.9e-10 71.2 131 38.9
Thhalv10024161m.g Eutrema salsugineum HOM05D000675 ORTHO05D000395 1.9e-10 71.2 81 46.9
C03p68610 Brassica napus HOM05D000675 ORTHO05D000395 2.5e-10 70.9 79 48.1
BolC3t19120H Brassica oleracea HOM05D000675 ORTHO05D000395 2.5e-10 70.9 79 48.1
Thhalv10022478m.g Eutrema salsugineum HOM05D000675 ORTHO05D000395 3.2e-10 70.5 73 47.9
AT1G31150 Arabidopsis thaliana HOM05D000675 ORTHO05D000395 4.2e-10 70.1 68 51.5
AL1G57250 Arabidopsis lyrata HOM05D000675 ORTHO05D000395 5.5e-10 69.7 109 43.1
BcaC04g20542 Brassica carinata HOM05D002776 ORTHO05D012331 5.5e-10 69.7 137 38.7
AL446U10030 Arabidopsis lyrata HOM05D000675 ORTHO05D000395 9.4e-10 68.9 67 50.7
BolC1t04758H Brassica oleracea HOM05D000675 ORTHO05D000395 9.4e-10 68.9 65 49.2
BraA05t21115Z Brassica rapa HOM05D002776 ORTHO05D000395 1.2e-09 68.6 58 63.8
C03p64920 Brassica napus HOM05D000675 ORTHO05D000395 1.6e-09 68.2 106 39.6
BcaC06g35068 Brassica carinata HOM05D002776 ORTHO05D012331 2.1e-09 67.8 134 35.8
BcaC04g22429 Brassica carinata HOM05D002776 ORTHO05D011320 2.7e-09 67.4 188 35.1
Thhalv10002262m.g Eutrema salsugineum HOM05D000675 ORTHO05D000395 2.7e-09 67.4 64 53.1
BcaC01g02927 Brassica carinata HOM05D001224 ORTHO05D014478 3.6e-09 67.0 197 31.5
C05p42010 Brassica napus HOM05D000675 ORTHO05D000395 3.6e-09 67.0 59 52.5
BcaC06g36448 Brassica carinata HOM05D002776 ORTHO05D003044 6.1e-09 66.2 188 35.6
C04p35160 Brassica napus HOM05D000675 ORTHO05D000395 6.1e-09 66.2 71 49.3
Thhalv10028107m.g Eutrema salsugineum HOM05D000675 ORTHO05D000395 6.1e-09 66.2 129 38.8
BcaB02g10769 Brassica carinata HOM05D002776 ORTHO05D012331 7.9e-09 65.9 141 36.2
Thhalv10010916m.g Eutrema salsugineum HOM05D000675 ORTHO05D000395 7.9e-09 65.9 64 51.6
Carub.0001s2955 Capsella rubella HOM05D000675 ORTHO05D000395 1.4e-08 65.1 68 48.5
BcaB06g26729 Brassica carinata HOM05D002776 ORTHO05D000395 5.1e-08 63.2 116 40.5
AL3G21260 Arabidopsis lyrata HOM05D000675 ORTHO05D000395 8.8e-08 62.4 82 41.5
BcaC02g12835 Brassica carinata HOM05D000675 ORTHO05D000395 3.3e-07 60.5 62 46.8
C04p39370 Brassica napus HOM05D000675 ORTHO05D000395 3.3e-07 60.5 62 46.8
BolC4t25504H Brassica oleracea HOM05D000675 ORTHO05D000395 3.3e-07 60.5 62 46.8
CARHR035130 Cardamine hirsuta HOM05D000675 ORTHO05D000395 3.3e-07 60.5 80 45.0
AL9U11170 Arabidopsis lyrata HOM05D000675 ORTHO05D000395 9.7e-07 58.9 97 35.1
BcaB02g06427 Brassica carinata HOM05D002776 ORTHO05D000395 9.7e-07 58.9 130 39.2
BcaC05g27135 Brassica carinata HOM05D001224 ORTHO05D010571 9.7e-07 58.9 171 30.4
BolC4t25530H Brassica oleracea HOM05D000675 ORTHO05D000395 1.3e-06 58.5 68 48.5
Carub.0006s2657 Capsella rubella HOM05D000675 ORTHO05D000395 1.3e-06 58.5 165 29.7
BcaNung03743 Brassica carinata HOM05D000675 ORTHO05D000395 1.7e-06 58.2 64 48.4
CARHR283870 Cardamine hirsuta HOM05D000675 ORTHO05D000395 1.7e-06 58.2 64 46.9
Thhalv10002818m.g Eutrema salsugineum HOM05D000675 ORTHO05D000395 2.2e-06 57.8 96 35.4
AL4G30840 Arabidopsis lyrata HOM05D000675 ORTHO05D000395 2.8e-06 57.4 146 32.9
BcaB04g17428 Brassica carinata HOM05D002776 ORTHO05D091936 2.8e-06 57.4 124 32.3
BcaC08g43834 Brassica carinata HOM05D001224 ORTHO05D014478 2.8e-06 57.4 104 34.6
BolC4t25936H Brassica oleracea HOM05D000675 ORTHO05D000395 2.8e-06 57.4 79 40.5
BcaB03g15207 Brassica carinata HOM05D000675 ORTHO05D000395 3.7e-06 57.0 65 47.7
BcaB03g16231 Brassica carinata HOM05D000675 ORTHO05D000395 3.7e-06 57.0 62 48.4
BcaB04g20306 Brassica carinata HOM05D000675 ORTHO05D000395 3.7e-06 57.0 69 44.9
Carub.0002s1170 Capsella rubella HOM05D000675 ORTHO05D000395 3.7e-06 57.0 64 45.3
Thhalv10000483m.g Eutrema salsugineum HOM05D000675 ORTHO05D000395 3.7e-06 57.0 43 60.5
Thhalv10002153m.g Eutrema salsugineum HOM05D000675 ORTHO05D000395 3.7e-06 57.0 73 43.8
BcaB04g17831 Brassica carinata HOM05D000675 ORTHO05D000395 4.8e-06 56.6 62 46.8
BolC9t57112H Brassica oleracea HOM05D001224 ORTHO05D012331 4.8e-06 56.6 82 37.8
Thhalv10002316m.g Eutrema salsugineum HOM05D000675 ORTHO05D000395 4.8e-06 56.6 79 41.8
Thhalv10003381m.g Eutrema salsugineum HOM05D000675 ORTHO05D000395 4.8e-06 56.6 42 57.1
Thhalv10022987m.g Eutrema salsugineum HOM05D000675 ORTHO05D000395 4.8e-06 56.6 51 52.9
BcaC04g18662 Brassica carinata HOM05D000675 ORTHO05D000395 6.3e-06 56.2 82 36.6
BraA01t02713Z Brassica rapa HOM05D000675 ORTHO05D027218 6.3e-06 56.2 70 41.4
CARHR258830 Cardamine hirsuta HOM05D000675 ORTHO05D000395 6.3e-06 56.2 72 40.3
BcaC02g10278 Brassica carinata HOM05D000675 ORTHO05D000395 8.2e-06 55.8 110 35.5
BcaC09g51286 Brassica carinata HOM05D000675 ORTHO05D000395 8.2e-06 55.8 94 35.1
C01p14780 Brassica napus HOM05D000675 ORTHO05D000395 8.2e-06 55.8 94 35.1


User provided reference genes

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