Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaB02g10410 Brassica carinata HOM05D000253 ORTHO05D000149 5.8e-39 163.7 80 100.0
BcaB02g10773 Brassica carinata HOM05D000253 ORTHO05D000149 5.8e-39 163.7 80 100.0
BcaC02g11277 Brassica carinata HOM05D000253 ORTHO05D000149 7.9e-28 126.7 80 76.2
C04p18190 Brassica napus HOM05D000253 ORTHO05D000149 1.4e-27 125.9 80 75.0
BolC4t23376H Brassica oleracea HOM05D000253 ORTHO05D000149 1.4e-27 125.9 80 75.0
Sp4g14090 Schrenkiella parvula HOM05D000253 ORTHO05D000149 3.0e-27 124.8 80 80.0
Thhalv10017922m.g Eutrema salsugineum HOM05D000253 ORTHO05D000149 6.7e-27 123.6 80 76.2
Carub.0004s1299 Capsella rubella HOM05D000253 ORTHO05D000149 6.3e-25 117.1 78 71.8
AT2G31690 Arabidopsis thaliana HOM05D000253 ORTHO05D000149 3.1e-24 114.8 80 72.5
BcaC01g05935 Brassica carinata HOM05D000253 ORTHO05D000149 1.5e-23 112.5 80 68.8
C03p20910 Brassica napus HOM05D000253 ORTHO05D000149 1.5e-23 112.5 80 68.8
BolC3t14471H Brassica oleracea HOM05D000253 ORTHO05D000149 1.5e-23 112.5 80 68.8
BcaB01g04027 Brassica carinata HOM05D000253 ORTHO05D000149 8.5e-22 106.7 80 68.8
A03p17840 Brassica napus HOM05D000253 ORTHO05D000149 1.6e-20 102.4 80 66.2
BraA03t11048Z Brassica rapa HOM05D000253 ORTHO05D000149 1.6e-20 102.4 80 66.2
CARHR125320 Cardamine hirsuta HOM05D000253 ORTHO05D000149 2.7e-20 101.7 79 69.6
A05p13830 Brassica napus HOM05D000253 ORTHO05D000149 1.3e-14 82.8 78 56.4
Aa31LG5G5290 Aethionema arabicum HOM05D000253 ORTHO05D000149 2.7e-12 75.1 80 55.0
Aa31LG1G8560 Aethionema arabicum HOM05D000253 ORTHO05D000149 3.1e-08 61.6 80 48.8
AT1G05800 Arabidopsis thaliana HOM05D000253 ORTHO05D000149 1.6e-07 59.3 85 49.4
AL1G15720 Arabidopsis lyrata HOM05D000253 ORTHO05D000149 2.7e-07 58.5 85 51.8
CARHR005320 Cardamine hirsuta HOM05D000253 ORTHO05D000149 1.0e-06 56.6 85 51.8
BcaC05g24334 Brassica carinata HOM05D000253 ORTHO05D000149 3.8e-06 54.7 85 43.5
C05p04120 Brassica napus HOM05D000253 ORTHO05D000149 3.8e-06 54.7 85 43.5
BolC5t29190H Brassica oleracea HOM05D000253 ORTHO05D000149 3.8e-06 54.7 85 43.5
A10p04510 Brassica napus HOM05D000253 ORTHO05D000149 8.5e-06 53.5 85 43.5
BraA10t42717Z Brassica rapa HOM05D000253 ORTHO05D000149 8.5e-06 53.5 85 43.5


User provided reference genes

Program Settings