Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaB02g10765 Brassica carinata HOM05D001498 ORTHO05D095468 1.0e-110 403.7 249 100.0
BolC4t23616H Brassica oleracea HOM05D001498 ORTHO05D016694 4.5e-53 212.2 174 78.2
BcaC06g35524 Brassica carinata HOM05D001498 ORTHO05D016694 1.3e-52 210.7 246 63.0
C04p20860 Brassica napus HOM05D001498 ORTHO05D016694 2.2e-52 209.9 174 77.6
BcaC02g11068 Brassica carinata HOM05D001498 ORTHO05D016694 8.4e-52 208.0 179 76.5
BolC9t57107H Brassica oleracea HOM05D001498 ORTHO05D016694 9.3e-51 204.5 174 75.3
C09p42290 Brassica napus HOM05D001498 ORTHO05D016694 2.7e-50 203.0 174 74.7
BcaC06g36329 Brassica carinata HOM05D001498 ORTHO05D096194 1.6e-47 193.7 176 65.3
C07p13940 Brassica napus HOM05D001379 ORTHO05D001277 1.2e-45 187.6 226 62.8
BcaC05g27663 Brassica carinata HOM05D001498 ORTHO05D090842 1.4e-43 180.6 188 63.8
BcaC04g20545 Brassica carinata HOM05D001498 ORTHO05D016694 7.1e-43 178.3 239 57.7
BolC1t03834H Brassica oleracea HOM05D001379 ORTHO05D001277 1.1e-40 171.0 219 58.0
C01p38770 Brassica napus HOM05D001379 ORTHO05D001277 3.3e-40 169.5 219 57.5
BolC7t40930H Brassica oleracea HOM05D001379 ORTHO05D016694 1.8e-33 147.1 133 64.7
BcaC04g20544 Brassica carinata HOM05D001498 ORTHO05D016694 5.1e-33 145.6 239 53.6
BcaC06g35064 Brassica carinata HOM05D001498 ORTHO05D016694 7.7e-29 131.7 122 72.1
BolC5t31266H Brassica oleracea HOM05D001498 ORTHO05D019959 1.0e-28 131.3 170 49.4
BolC7t41038H Brassica oleracea HOM05D001498 ORTHO05D032253 2.5e-27 126.7 244 49.2
C07p06210 Brassica napus HOM05D001498 ORTHO05D032253 1.4e-25 120.9 248 47.6
BcaC06g36230 Brassica carinata HOM05D001498 ORTHO05D032253 1.7e-23 114.0 186 51.6
BcaC02g11926 Brassica carinata HOM05D001498 ORTHO05D019959 2.8e-23 113.2 94 62.8
BcaB02g11218 Brassica carinata HOM05D001224 ORTHO05D010571 8.2e-23 111.7 166 54.2
BcaB06g27205 Brassica carinata HOM05D001498 ORTHO05D091204 4.7e-18 95.9 92 58.7
C05p25290 Brassica napus HOM05D001498 ORTHO05D019959 1.0e-17 94.7 183 41.0
BcaB04g17776 Brassica carinata HOM05D001498 ORTHO05D092868 2.3e-17 93.6 146 42.5
BcaB04g17785 Brassica carinata HOM05D003591 ORTHO05D094524 7.4e-16 88.6 100 61.0
BcaB01g01484 Brassica carinata HOM05D001498 ORTHO05D091615 1.4e-14 84.3 143 39.9
BcaB06g26678 Brassica carinata HOM05D001498 ORTHO05D094527 4.1e-14 82.8 74 60.8
BcaB01g01185 Brassica carinata HOM05D001498 ORTHO05D019959 5.3e-14 82.4 173 35.3
BcaB05g23077 Brassica carinata HOM05D001498 ORTHO05D091436 5.3e-14 82.4 80 55.0
BcaB07g32989 Brassica carinata HOM05D001498 ORTHO05D008559 5.3e-14 82.4 143 39.9
BcaB01g03187 Brassica carinata HOM05D001498 ORTHO05D090608 9.1e-14 81.6 99 50.5
BcaB07g32913 Brassica carinata HOM05D001498 ORTHO05D091922 9.1e-14 81.6 77 53.2
BcaB03g16152 Brassica carinata HOM05D001498 ORTHO05D093112 2.6e-13 80.1 98 48.0
BcaB05g22880 Brassica carinata HOM05D001498 ORTHO05D019959 2.6e-13 80.1 89 56.2
BcaB04g17678 Brassica carinata HOM05D001498 ORTHO05D094760 4.5e-13 79.3 99 49.5
BcaB01g01371 Brassica carinata HOM05D001498 ORTHO05D091381 7.7e-13 78.6 166 44.0
BcaB07g33220 Brassica carinata HOM05D001498 ORTHO05D096371 1.0e-12 78.2 88 48.9
BcaB08g35016 Brassica carinata HOM05D001498 ORTHO05D092631 1.3e-12 77.8 99 47.5
BcaB07g33084 Brassica carinata HOM05D001498 ORTHO05D092207 1.7e-12 77.4 80 56.2
BcaB01g01816 Brassica carinata HOM05D001498 ORTHO05D091844 2.9e-12 76.6 97 52.6
BcaB05g23120 Brassica carinata HOM05D001498 ORTHO05D090647 3.8e-12 76.3 98 44.9
BcaB07g33217 Brassica carinata HOM05D001498 ORTHO05D093085 5.0e-12 75.9 80 55.0
C02p39460 Brassica napus HOM05D008414 ORTHO05D014108 5.0e-12 75.9 273 34.8
BcaB07g33085 Brassica carinata HOM05D001498 ORTHO05D095625 6.5e-12 75.5 99 46.5
BcaB07g33315 Brassica carinata HOM05D001498 ORTHO05D091495 6.5e-12 75.5 97 46.4
BcaB05g22943 Brassica carinata HOM05D001498 ORTHO05D096110 8.5e-12 75.1 76 53.9
BcaB05g23244 Brassica carinata HOM05D001498 ORTHO05D095601 1.5e-11 74.3 73 58.9
BcaB04g17490 Brassica carinata HOM05D001498 ORTHO05D019959 2.5e-11 73.6 72 56.9
BcaB06g27273 Brassica carinata HOM05D001498 ORTHO05D094467 2.5e-11 73.6 95 50.5
BcaB01g01309 Brassica carinata HOM05D001498 ORTHO05D091216 3.2e-11 73.2 76 52.6
A08p09540 Brassica napus HOM05D001498 ORTHO05D011506 3.2e-11 73.2 131 36.6
BcaB03g16624 Brassica carinata HOM05D008414 ORTHO05D095320 4.2e-11 72.8 129 55.0
BcaB04g18314 Brassica carinata HOM05D001498 ORTHO05D095953 4.2e-11 72.8 63 58.7
BcaB06g26483 Brassica carinata HOM05D001498 ORTHO05D095599 1.2e-10 71.2 97 45.4
BcaB05g23246 Brassica carinata HOM05D001498 ORTHO05D090900 2.1e-10 70.5 75 52.0
BcaB06g26727 Brassica carinata HOM05D001498 ORTHO05D093134 2.1e-10 70.5 95 49.5
A03p54380 Brassica napus HOM05D001498 ORTHO05D011506 2.1e-10 70.5 81 49.4
BcaB02g11279 Brassica carinata HOM05D001498 ORTHO05D095830 2.7e-10 70.1 78 47.4
A08p06060 Brassica napus HOM05D001498 ORTHO05D011506 2.7e-10 70.1 81 49.4
BcaB07g33213 Brassica carinata HOM05D001498 ORTHO05D090837 3.6e-10 69.7 90 50.0
C01p38680 Brassica napus HOM05D001498 ORTHO05D011506 8.0e-10 68.6 98 44.9
BolC1t03827H Brassica oleracea HOM05D001498 ORTHO05D011506 8.0e-10 68.6 98 44.9
BcaB07g33754 Brassica carinata HOM05D001498 ORTHO05D092729 1.0e-09 68.2 58 60.3
BcaC09g48967 Brassica carinata HOM05D001498 ORTHO05D011506 1.4e-09 67.8 98 43.9
A01p28560 Brassica napus HOM05D001498 ORTHO05D021639 1.4e-09 67.8 73 52.1
C01p30520 Brassica napus HOM05D001498 ORTHO05D001885 1.4e-09 67.8 98 43.9
BcaB05g24509 Brassica carinata HOM05D001379 ORTHO05D001277 1.8e-09 67.4 63 60.3
BcaC04g19551 Brassica carinata HOM05D001498 ORTHO05D090991 1.8e-09 67.4 66 54.5
C02p52020 Brassica napus HOM05D001498 ORTHO05D011506 1.8e-09 67.4 100 43.0
BolC2t11288H Brassica oleracea HOM05D001498 ORTHO05D011506 1.8e-09 67.4 100 43.0
BcaC04g20364 Brassica carinata HOM05D001498 ORTHO05D011506 2.3e-09 67.0 98 43.9
BolC1t02817H Brassica oleracea HOM05D001498 ORTHO05D106172 2.3e-09 67.0 98 44.9
C06p31050 Brassica napus HOM05D001498 ORTHO05D011506 4.0e-09 66.2 97 44.3
C04p09850 Brassica napus HOM05D001498 ORTHO05D101798 5.2e-09 65.9 52 67.3
C08p17880 Brassica napus HOM05D001498 ORTHO05D001885 5.2e-09 65.9 152 36.8
BolC8t47367H Brassica oleracea HOM05D001498 ORTHO05D011506 5.2e-09 65.9 147 35.4
C03p66370 Brassica napus HOM05D001498 ORTHO05D011506 6.7e-09 65.5 108 42.6
C09p27470 Brassica napus HOM05D001498 ORTHO05D011506 6.7e-09 65.5 98 43.9
BcaC07g38657 Brassica carinata HOM05D001498 ORTHO05D011506 1.2e-08 64.7 99 44.4
BcaC09g50109 Brassica carinata HOM05D001498 ORTHO05D093510 1.2e-08 64.7 84 51.2
C01p48970 Brassica napus HOM05D001498 ORTHO05D011506 1.2e-08 64.7 106 40.6
BolC8t49067H Brassica oleracea HOM05D001498 ORTHO05D011506 1.2e-08 64.7 99 44.4
BraA03t15290Z Brassica rapa HOM05D001498 ORTHO05D011506 1.2e-08 64.7 99 44.4
BcaC02g09114 Brassica carinata HOM05D001498 ORTHO05D011506 1.5e-08 64.3 75 50.7
C04p36710 Brassica napus HOM05D001498 ORTHO05D001885 2.0e-08 63.9 108 41.7
BcaB06g25736 Brassica carinata HOM05D001498 ORTHO05D021639 2.6e-08 63.5 77 48.1
BolC3t19484H Brassica oleracea HOM05D001498 ORTHO05D011506 2.6e-08 63.5 164 36.0
BcaB08g35076 Brassica carinata HOM05D001498 ORTHO05D021639 3.3e-08 63.2 100 44.0
BcaB02g11277 Brassica carinata HOM05D001498 ORTHO05D091891 4.4e-08 62.8 83 47.0
BcaC05g27519 Brassica carinata HOM05D001498 ORTHO05D011506 4.4e-08 62.8 100 41.0
C04p21380 Brassica napus HOM05D001498 ORTHO05D013028 4.4e-08 62.8 173 34.1
BcaB07g32352 Brassica carinata HOM05D001498 ORTHO05D021639 5.7e-08 62.4 100 42.0
BcaB06g26755 Brassica carinata HOM05D001498 ORTHO05D092466 7.5e-08 62.0 77 46.8
BcaC08g44373 Brassica carinata HOM05D001498 ORTHO05D011506 7.5e-08 62.0 151 35.8
C07p49110 Brassica napus HOM05D001498 ORTHO05D097837 7.5e-08 62.0 172 33.7
BcaC08g44056 Brassica carinata HOM05D001498 ORTHO05D091470 1.3e-07 61.2 108 40.7
C09p17600 Brassica napus HOM05D001498 ORTHO05D011506 1.3e-07 61.2 173 33.5
BcaB03g16298 Brassica carinata HOM05D001498 ORTHO05D095831 1.7e-07 60.8 95 44.2
C03p66000 Brassica napus HOM05D001498 ORTHO05D001885 1.7e-07 60.8 171 36.8
BcaB06g25739 Brassica carinata HOM05D001498 ORTHO05D093323 2.2e-07 60.5 100 41.0
BcaB08g35461 Brassica carinata HOM05D001498 ORTHO05D090491 2.2e-07 60.5 99 41.4
BolC3t17911H Brassica oleracea HOM05D001498 ORTHO05D008559 2.2e-07 60.5 168 33.3
BolC9t54653H Brassica oleracea HOM05D001498 ORTHO05D011506 2.2e-07 60.5 173 33.5
BcaB04g18432 Brassica carinata HOM05D001498 ORTHO05D090882 2.8e-07 60.1 100 43.0
BcaB07g33139 Brassica carinata HOM05D001498 ORTHO05D092157 3.7e-07 59.7 48 64.6
C01p44920 Brassica napus HOM05D001498 ORTHO05D011506 3.7e-07 59.7 168 33.3
C03p56230 Brassica napus HOM05D001498 ORTHO05D001885 3.7e-07 59.7 168 36.3
BcaB03g15933 Brassica carinata HOM05D001498 ORTHO05D021639 4.8e-07 59.3 100 40.0
C01p30560 Brassica napus HOM05D001498 ORTHO05D011506 4.8e-07 59.3 158 32.9
C09p16580 Brassica napus HOM05D001498 ORTHO05D011506 1.1e-06 58.2 168 32.7
BcaC05g26789 Brassica carinata HOM05D001498 ORTHO05D094205 1.4e-06 57.8 74 51.4
BcaB06g26648 Brassica carinata HOM05D001498 ORTHO05D094209 1.8e-06 57.4 145 35.9
BcaB04g17703 Brassica carinata HOM05D001498 ORTHO05D021639 3.1e-06 56.6 85 42.4
A08p07550 Brassica napus HOM05D001498 ORTHO05D011506 4.1e-06 56.2 170 31.2
BraA08t32774Z Brassica rapa HOM05D001498 ORTHO05D001885 4.1e-06 56.2 170 31.2
BolC2t09959H Brassica oleracea HOM05D008414 ORTHO05D033195 7.0e-06 55.5 245 35.5


User provided reference genes

Program Settings