Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaB02g10590 Brassica carinata HOM05D007759 ORTHO05D008318 3.1e-40 167.9 81 100.0
BolC1t02876H Brassica oleracea HOM05D000305 ORTHO05D000065 1.8e-32 142.1 80 86.2
BolC1t02858H Brassica oleracea HOM05D007759 ORTHO05D008318 7.0e-32 140.2 80 85.0
BolC6t37317H Brassica oleracea HOM05D007759 ORTHO05D008318 9.2e-32 139.8 76 88.2
C01p29370 Brassica napus HOM05D000305 ORTHO05D000065 5.9e-31 137.1 80 83.8
BcaC09g50072 Brassica carinata HOM05D007759 ORTHO05D008318 2.3e-30 135.2 76 86.8
BcaC05g27701 Brassica carinata HOM05D007759 ORTHO05D008318 1.5e-29 132.5 76 84.2
C01p29320 Brassica napus HOM05D000305 ORTHO05D000065 1.5e-29 132.5 80 82.5
C05p36840 Brassica napus HOM05D000305 ORTHO05D008318 1.5e-29 132.5 76 84.2
BolC5t32424H Brassica oleracea HOM05D000305 ORTHO05D008318 1.5e-29 132.5 76 84.2
BcaC09g51523 Brassica carinata HOM05D007759 ORTHO05D008318 3.0e-27 124.8 76 76.3
A08p07380 Brassica napus HOM05D000305 ORTHO05D008318 2.3e-22 108.6 61 86.9
BraA08t32755Z Brassica rapa HOM05D007759 ORTHO05D008318 2.3e-22 108.6 61 86.9
BcaB02g07732 Brassica carinata HOM05D007759 ORTHO05D008318 1.1e-21 106.3 71 73.2
BcaC09g50078 Brassica carinata HOM05D000305 ORTHO05D000065 1.5e-21 105.9 65 81.5
BolSC21t60227H Brassica oleracea HOM05D007759 ORTHO05D008318 1.2e-10 69.7 73 49.3
A07p18500 Brassica napus HOM05D007759 ORTHO05D008318 2.6e-10 68.6 73 47.9
BcaC01g02224 Brassica carinata HOM05D007759 ORTHO05D008318 4.4e-10 67.8 73 47.9
BcaC08g46655 Brassica carinata HOM05D007759 ORTHO05D008318 4.4e-10 67.8 73 49.3
C03p67680 Brassica napus HOM05D007759 ORTHO05D008318 4.4e-10 67.8 73 47.9
BcaC03g17946 Brassica carinata HOM05D007759 ORTHO05D008318 5.8e-10 67.4 73 47.9
BolC8t47656H Brassica oleracea HOM05D000096 ORTHO05D000045 7.5e-10 67.0 60 55.0
C08p08060 Brassica napus HOM05D000313 ORTHO05D000065 9.9e-10 66.6 60 53.3
A05p10430 Brassica napus HOM05D007759 ORTHO05D008318 1.7e-09 65.9 71 47.9
A05p26180 Brassica napus HOM05D007759 ORTHO05D008318 1.7e-09 65.9 71 47.9
A07p25500 Brassica napus HOM05D007759 ORTHO05D008318 1.7e-09 65.9 71 47.9
A09p15820 Brassica napus HOM05D007759 ORTHO05D008318 3.7e-09 64.7 73 46.6
BcaC05g25628 Brassica carinata HOM05D007011 ORTHO05D008837 4.9e-09 64.3 73 45.2
A04p16590 Brassica napus HOM05D007759 ORTHO05D008318 6.4e-09 63.9 71 46.5
A07p09660 Brassica napus HOM05D007759 ORTHO05D008318 1.9e-08 62.4 67 49.3
BcaB06g27974 Brassica carinata HOM05D000305 ORTHO05D000065 5.4e-08 60.8 65 46.2
BcaNung02441 Brassica carinata HOM05D007759 ORTHO05D008318 5.4e-08 60.8 65 46.2
BcaNung04086 Brassica carinata HOM05D007759 ORTHO05D008318 5.4e-08 60.8 65 46.2
A03p64890 Brassica napus HOM05D007759 ORTHO05D008318 5.4e-08 60.8 67 47.8
C06p12950 Brassica napus HOM05D007759 ORTHO05D008318 7.1e-08 60.5 58 51.7
A09p61940 Brassica napus HOM05D007759 ORTHO05D008318 9.2e-08 60.1 67 46.3
A06p29370 Brassica napus HOM05D007759 ORTHO05D008318 1.2e-07 59.7 67 46.3
C02p05460 Brassica napus HOM05D007759 ORTHO05D008318 1.2e-07 59.7 31 83.9
A05p25410 Brassica napus HOM05D007759 ORTHO05D008318 2.1e-07 58.9 67 46.3
A05p45000 Brassica napus HOM05D007759 ORTHO05D008318 2.1e-07 58.9 67 46.3
A09p01240 Brassica napus HOM05D007759 ORTHO05D008318 2.1e-07 58.9 67 46.3
BcaB04g19215 Brassica carinata HOM05D007759 ORTHO05D008318 2.3e-06 55.5 57 50.9
BcaB01g03487 Brassica carinata HOM05D007759 ORTHO05D008318 3.9e-06 54.7 65 44.6
BcaB03g12128 Brassica carinata HOM05D007759 ORTHO05D008318 3.9e-06 54.7 65 44.6


User provided reference genes

Program Settings