Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaB02g10530 Brassica carinata HOM05D008277 ORTHO05D011446 4.8e-84 314.3 143 100.0
BcaB04g17639 Brassica carinata HOM05D008277 ORTHO05D011446 8.8e-70 266.9 156 79.5
BcaC05g27188 Brassica carinata HOM05D008277 ORTHO05D011446 4.1e-59 231.5 155 71.6
C07p01670 Brassica napus HOM05D008277 ORTHO05D018788 2.1e-55 219.2 141 74.5
BraA04t16626Z Brassica rapa HOM05D008277 ORTHO05D011446 7.5e-53 210.7 154 66.9
BNapus_Darmor_BZH_scaffold_103p00040 Brassica napus HOM05D008277 ORTHO05D011446 1.7e-52 209.5 154 66.9
BNapus_Darmor_BZH_scaffold_104p00040 Brassica napus HOM05D008277 ORTHO05D011446 1.7e-52 209.5 154 66.9
BraA01t02693Z Brassica rapa HOM05D008277 ORTHO05D011446 2.2e-52 209.1 147 68.0
A01p27640 Brassica napus HOM05D008277 ORTHO05D011446 3.7e-52 208.4 154 66.9
BraA01t02902Z Brassica rapa HOM05D008277 ORTHO05D011446 3.7e-52 208.4 154 66.9
BcaC07g38867 Brassica carinata HOM05D008277 ORTHO05D011446 1.8e-51 206.1 143 69.9
BraA05t21322Z Brassica rapa HOM05D008277 ORTHO05D011446 5.3e-51 204.5 153 64.7
A05p29650 Brassica napus HOM05D008277 ORTHO05D011446 7.0e-51 204.1 156 64.7
A03p67720 Brassica napus HOM05D008277 ORTHO05D011446 4.5e-50 201.4 162 62.3
BcaC07g38322 Brassica carinata HOM05D008277 ORTHO05D011446 6.5e-49 197.6 143 69.2
A03p66470 Brassica napus HOM05D008277 ORTHO05D011446 2.5e-48 195.7 162 61.7
BcaB05g23045 Brassica carinata HOM05D008277 ORTHO05D093753 7.2e-48 194.1 156 63.5
C04p13480 Brassica napus HOM05D008277 ORTHO05D011446 1.2e-47 193.4 162 61.1
A04p09680 Brassica napus HOM05D008277 ORTHO05D011446 8.0e-47 190.7 162 60.5
BraA07t28336Z Brassica rapa HOM05D004489 ORTHO05D018788 1.3e-44 183.3 126 69.0
BraA03t14602Z Brassica rapa HOM05D008277 ORTHO05D011446 5.4e-43 177.9 131 66.4
BraA07t28379Z Brassica rapa HOM05D008277 ORTHO05D011446 9.2e-35 150.6 116 66.4
BraA03t15700Z Brassica rapa HOM05D008277 ORTHO05D011446 2.9e-33 145.6 109 67.9
C02p24700 Brassica napus HOM05D004489 ORTHO05D098125 1.7e-28 129.8 72 83.3
BraA08t32901Z Brassica rapa HOM05D008277 ORTHO05D011446 7.0e-27 124.4 70 82.9
BraA10t42927Z Brassica rapa HOM05D008277 ORTHO05D011446 4.6e-26 121.7 70 81.4
BcaB04g17829 Brassica carinata HOM05D008277 ORTHO05D011446 3.0e-25 119.0 60 96.7
BraA05t21198Z Brassica rapa HOM05D008277 ORTHO05D011446 6.6e-25 117.9 70 78.6
BraA07t28410Z Brassica rapa HOM05D008277 ORTHO05D011446 1.6e-23 113.2 63 84.1
A09p17520 Brassica napus HOM05D008277 ORTHO05D011446 1.1e-22 110.5 70 74.3
BcaC01g02602 Brassica carinata HOM05D008277 ORTHO05D011446 1.8e-22 109.8 62 80.6
BraA09t38682Z Brassica rapa HOM05D008277 ORTHO05D011446 6.8e-22 107.8 63 81.0
C04p22330 Brassica napus HOM05D008277 ORTHO05D011446 3.7e-20 102.1 72 63.9
BcaC04g22308 Brassica carinata HOM05D008277 ORTHO05D011446 6.4e-20 101.3 61 80.3
BcaC03g15256 Brassica carinata HOM05D004489 ORTHO05D010056 4.6e-18 95.1 53 79.2
BcaB05g24918 Brassica carinata HOM05D004489 ORTHO05D092070 7.8e-18 94.4 49 87.8
BcaB08g35276 Brassica carinata HOM05D008277 ORTHO05D091063 2.8e-15 85.9 95 50.5
BcaC04g22798 Brassica carinata HOM05D004489 ORTHO05D010056 1.4e-14 83.6 43 81.4
BcaC07g38382 Brassica carinata HOM05D004489 ORTHO05D010056 2.6e-13 79.3 40 85.0
BolC3t18662H Brassica oleracea HOM05D008277 ORTHO05D028234 3.4e-13 79.0 40 82.5
BraA01t03007Z Brassica rapa HOM05D008277 ORTHO05D016104 9.9e-13 77.4 42 85.7
BolC8t47152H Brassica oleracea HOM05D008277 ORTHO05D028234 1.7e-12 76.6 37 86.5
BolC9t56835H Brassica oleracea HOM05D008277 ORTHO05D011446 3.7e-12 75.5 42 83.3
BolC8t48603H Brassica oleracea HOM05D008277 ORTHO05D011446 1.9e-11 73.2 42 81.0
A01p28050 Brassica napus HOM05D008277 ORTHO05D028234 1.2e-10 70.5 37 81.1
A05p29420 Brassica napus HOM05D008277 ORTHO05D011446 7.8e-10 67.8 52 67.3
BcaC06g35863 Brassica carinata HOM05D008277 ORTHO05D092253 1.9e-08 63.2 60 58.3
BraA03t15298Z Brassica rapa HOM05D008277 ORTHO05D028234 7.3e-08 61.2 39 64.1


User provided reference genes

Program Settings