Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaB02g10457 Brassica carinata HOM05D009593 ORTHO05D011753 6.4e-35 150.2 77 100.0
A05p13310 Brassica napus HOM05D009593 ORTHO05D011753 3.0e-24 114.8 78 76.9
C04p17060 Brassica napus HOM05D009593 ORTHO05D011753 1.9e-23 112.1 78 75.6
Thhalv10017495m.g Eutrema salsugineum HOM05D009593 ORTHO05D011753 4.3e-23 110.9 78 74.4
CARHR126470 Cardamine hirsuta HOM05D009593 ORTHO05D011753 6.1e-17 90.5 78 61.5
BcaC01g05902 Brassica carinata HOM05D009593 ORTHO05D011753 2.8e-14 81.6 78 61.5
Carub.0004s1395 Capsella rubella HOM05D009593 ORTHO05D011753 2.0e-12 75.5 72 66.7
AL4G28020 Arabidopsis lyrata HOM05D009593 ORTHO05D011753 4.5e-12 74.3 72 62.5
BcaB01g03972 Brassica carinata HOM05D001608 ORTHO05D000411 7.2e-10 67.0 54 66.7
CARHR004530 Cardamine hirsuta HOM05D009593 ORTHO05D011753 2.1e-09 65.5 72 52.8
BcaC05g24415 Brassica carinata HOM05D009593 ORTHO05D011753 3.6e-09 64.7 61 57.4
BcaC05g24417 Brassica carinata HOM05D009593 ORTHO05D011753 3.6e-09 64.7 73 53.4
C05p03260 Brassica napus HOM05D009593 ORTHO05D011753 3.6e-09 64.7 73 53.4
BolC5t29107H Brassica oleracea HOM05D009593 ORTHO05D011753 3.6e-09 64.7 73 53.4
Thhalv10009388m.g Eutrema salsugineum HOM05D009593 ORTHO05D011753 6.1e-09 63.9 62 53.2
AT1G05065 Arabidopsis thaliana HOM05D009593 ORTHO05D011753 1.0e-08 63.2 72 52.8
BcaC07g42151 Brassica carinata HOM05D009593 ORTHO05D011753 3.0e-08 61.6 72 52.8
C08p51980 Brassica napus HOM05D009593 ORTHO05D011753 3.0e-08 61.6 72 52.8
BcaC07g42152 Brassica carinata HOM05D009593 ORTHO05D011753 5.1e-08 60.8 73 50.7
BcaB02g06883 Brassica carinata HOM05D009593 ORTHO05D011753 6.7e-08 60.5 73 53.4
BraA09t42093Z Brassica rapa HOM05D009593 ORTHO05D011753 1.5e-07 59.3 73 50.7
Aa31LG8G1890 Aethionema arabicum HOM05D009593 ORTHO05D011753 2.0e-07 58.9 75 49.3
A09p67610 Brassica napus HOM05D009593 ORTHO05D011753 2.0e-07 58.9 73 49.3
A10p03570 Brassica napus HOM05D009593 ORTHO05D011753 5.7e-07 57.4 73 50.7
BraA10t42634Z Brassica rapa HOM05D009593 ORTHO05D011753 5.7e-07 57.4 73 50.7
Potri.014G156600 Populus trichocarpa HOM05D009830 ORTHO05D011381 2.8e-06 55.1 69 53.6
Carub.0001s0434 Capsella rubella HOM05D009593 ORTHO05D011753 8.2e-06 53.5 79 48.1
Medtr5g085990 Medicago truncatula HOM05D009830 ORTHO05D011381 8.2e-06 53.5 69 50.7


User provided reference genes

Program Settings