Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaB02g10272 Brassica carinata HOM05D005325 ORTHO05D003507 3.4e-65 251.5 129 100.0
BolC4t23643H Brassica oleracea HOM05D005325 ORTHO05D008457 4.1e-50 201.4 124 84.7
A05p15750 Brassica napus HOM05D005325 ORTHO05D008457 2.2e-48 195.7 111 90.1
BraA05t20490Z Brassica rapa HOM05D005325 ORTHO05D008457 9.4e-47 190.3 111 89.2
A04p22570 Brassica napus HOM05D005325 ORTHO05D008457 2.6e-44 182.2 123 79.7
BcaC02g11049 Brassica carinata HOM05D005325 ORTHO05D003507 8.2e-43 177.2 110 83.6
BraA04t17802Z Brassica rapa HOM05D005325 ORTHO05D008457 1.1e-42 176.8 126 76.2
BcaB06g28321 Brassica carinata HOM05D005325 ORTHO05D003507 1.4e-37 159.8 110 79.1
Carub.0004s1074 Capsella rubella HOM05D005325 ORTHO05D003507 9.8e-36 153.7 111 75.7
BcaC02g08075 Brassica carinata HOM05D005325 ORTHO05D008457 1.1e-34 150.2 112 75.0
C04p58710 Brassica napus HOM05D005325 ORTHO05D008457 1.1e-34 150.2 112 75.0
Thhalv10017013m.g Eutrema salsugineum HOM05D005325 ORTHO05D008457 1.8e-34 149.4 109 75.2
BolC4t27390H Brassica oleracea HOM05D005325 ORTHO05D008457 2.4e-34 149.1 121 70.2
Aa31LG5G6840 Aethionema arabicum HOM05D005325 ORTHO05D003507 4.1e-34 148.3 116 69.8
Thhalv10009101m.g Eutrema salsugineum HOM05D005325 ORTHO05D003507 7.7e-33 144.1 113 67.3
AT1G07300 Arabidopsis thaliana HOM05D005325 ORTHO05D003507 1.0e-32 143.7 125 64.8
AL1G17450 Arabidopsis lyrata HOM05D005325 ORTHO05D003507 6.5e-32 141.0 114 69.3
Sp4g12360 Schrenkiella parvula HOM05D005325 ORTHO05D003507 4.7e-30 134.8 110 71.8
BraA09t41987Z Brassica rapa HOM05D005325 ORTHO05D003507 1.0e-29 133.7 115 64.3
Sp1g06050 Schrenkiella parvula HOM05D005325 ORTHO05D003507 1.0e-29 133.7 114 64.9
CARHR007020 Cardamine hirsuta HOM05D005325 ORTHO05D003507 2.3e-29 132.5 111 64.9
CARHR122980 Cardamine hirsuta HOM05D005325 ORTHO05D003507 3.0e-29 132.1 122 67.2
C08p50660 Brassica napus HOM05D005325 ORTHO05D003507 4.0e-29 131.7 113 64.6
BolC8t52594H Brassica oleracea HOM05D005325 ORTHO05D003507 4.0e-29 131.7 113 64.6
Aa31LG1G6560 Aethionema arabicum HOM05D005325 ORTHO05D003507 6.8e-29 131.0 116 64.7
Carub.0001s0660 Capsella rubella HOM05D005325 ORTHO05D003507 1.5e-28 129.8 115 66.1
AL4G24390 Arabidopsis lyrata HOM05D005325 ORTHO05D008457 7.5e-28 127.5 117 64.1
BcaC07g42009 Brassica carinata HOM05D005325 ORTHO05D003507 7.5e-28 127.5 115 64.3
A10p05870 Brassica napus HOM05D005325 ORTHO05D003507 1.7e-27 126.3 114 61.4
BraA10t42849Z Brassica rapa HOM05D005325 ORTHO05D003507 2.4e-26 122.5 115 61.7
AT2G29640 Arabidopsis thaliana HOM05D005325 ORTHO05D008457 4.1e-26 121.7 127 60.6
BcaC07g42458 Brassica carinata HOM05D005325 ORTHO05D003507 2.3e-24 115.9 115 60.0
BolC5t29309H Brassica oleracea HOM05D005325 ORTHO05D003507 2.3e-24 115.9 115 60.0
C05p05370 Brassica napus HOM05D005325 ORTHO05D003507 6.6e-24 114.4 121 56.2
Rhsim13G0071800 Rhododendron simsii HOM05D004233 ORTHO05D003507 6.6e-08 61.2 100 42.0
Ciclev10029412m.g Citrus clementina HOM05D004233 ORTHO05D003507 9.5e-07 57.4 114 36.8


User provided reference genes

Program Settings