Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaB02g10248 Brassica carinata HOM05D000020 ORTHO05D092017 5.0e-50 200.7 92 100.0
BcaC07g39905 Brassica carinata HOM05D000020 ORTHO05D007189 3.1e-12 75.1 50 78.0
C08p31110 Brassica napus HOM05D000020 ORTHO05D007189 3.1e-12 75.1 50 78.0
BolC8t50732H Brassica oleracea HOM05D000020 ORTHO05D007189 3.1e-12 75.1 50 78.0
BcaB01g00062 Brassica carinata HOM05D000020 ORTHO05D007189 4.1e-12 74.7 52 73.1
AL5G37060 Arabidopsis lyrata HOM05D000020 ORTHO05D007189 9.2e-12 73.6 47 74.5
A09p48780 Brassica napus HOM05D000020 ORTHO05D007189 1.6e-11 72.8 45 75.6
BraA09t40331Z Brassica rapa HOM05D000020 ORTHO05D007189 1.6e-11 72.8 45 75.6
Sp5g06700 Schrenkiella parvula HOM05D000020 ORTHO05D007189 1.6e-11 72.8 50 76.0
CARHR165890 Cardamine hirsuta HOM05D000020 ORTHO05D007189 3.5e-11 71.6 44 77.3
Carub.0005s2257 Capsella rubella HOM05D000020 ORTHO05D007189 4.5e-11 71.2 44 77.3
AT3G55780 Arabidopsis thaliana HOM05D000020 ORTHO05D007189 1.0e-10 70.1 44 75.0
Thhalv10010910m.g Eutrema salsugineum HOM05D000020 ORTHO05D007189 1.0e-10 70.1 44 75.0
Aa31LG10G10770 Aethionema arabicum HOM05D000020 ORTHO05D007189 7.3e-09 63.9 43 65.1
Aa31LG5G19710 Aethionema arabicum HOM05D006228 ORTHO05D007847 2.8e-08 62.0 45 64.4


User provided reference genes

Program Settings